BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0020.p (284 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241420.1| ABC transporter periplasmic-binding protein ... 468 e-130 ref|NP_772532.1| hypothetical protein bll5892 [Bradyrhizobium ja... 468 e-130 ref|YP_001206996.1| ABC transporter periplasmic-binding protein ... 467 e-130 ref|YP_568776.1| hypothetical protein RPD_1638 [Rhodopseudomonas... 430 e-118 ref|YP_485249.1| hypothetical protein RPB_1629 [Rhodopseudomonas... 430 e-118 >ref|YP_001241420.1| ABC transporter periplasmic-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ37514.1| Putative ABC transporter (periplasmic binding protein) [Bradyrhizobium sp. BTAi1] Length = 292 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 226/271 (83%), Positives = 254/271 (93%) Query: 1 METRANYVLIGAFTLAVIAAAFGFVLWFQSLHTTKQRSPLRVIFEGPASGLRNGGNVNFN 60 METRANYVLIG+FTLAVIAAA GFVLWFQSLHTTKQRSPLRV+FEGPA+GLRNGG+VNFN Sbjct: 1 METRANYVLIGSFTLAVIAAAVGFVLWFQSLHTTKQRSPLRVVFEGPAAGLRNGGSVNFN 60 Query: 61 GIRIGEVVSVKLDNPRRVVALAMIENNAPLRKDTLVGLEFQGLTGVAAISLKGGEEAAPP 120 GIR+GEV+SVKLDNPRRVVALAM+ENNAP+RKDTLVGLEFQGLTGVAAI+LKGGEEAAPP Sbjct: 61 GIRVGEVISVKLDNPRRVVALAMVENNAPIRKDTLVGLEFQGLTGVAAIALKGGEEAAPP 120 Query: 121 VPLDEDGIPVLTADPNALQDVTEAIRATLQNVNRIVADNQQSVKNSLKNLEVFTQALARN 180 PLDEDG+PVL ADP LQDVTEAIRATLQN+N++VADNQ +VKNS+KNLEVFTQ+LARN Sbjct: 121 PPLDEDGVPVLRADPTRLQDVTEAIRATLQNINKVVADNQDAVKNSIKNLEVFTQSLARN 180 Query: 181 SEKIDNVMLKVDGVMGKADSLMLGLNAIAGGNNGSELNLMVKSIRELAEDLDKRSNLLIN 240 SE+ID VM +VDG+MGKAD+LMLGLN++AGG +G EL L VKSIRELAED DKRS L+ Sbjct: 181 SERIDGVMSRVDGIMGKADTLMLGLNSLAGGKDGGELFLTVKSIRELAEDFDKRSGALMA 240 Query: 241 DGRRTLSDISRAVNNFDRNPSRVIFGGSNNA 271 DGRRTLSDISRAVNNFDRNP+RV+FG SN++ Sbjct: 241 DGRRTLSDISRAVNNFDRNPTRVLFGASNSS 271 >ref|NP_772532.1| hypothetical protein bll5892 [Bradyrhizobium japonicum USDA 110] dbj|BAC51157.1| bll5892 [Bradyrhizobium japonicum USDA 110] Length = 292 Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust. Identities = 231/270 (85%), Positives = 250/270 (92%) Query: 1 METRANYVLIGAFTLAVIAAAFGFVLWFQSLHTTKQRSPLRVIFEGPASGLRNGGNVNFN 60 METRANYVLIG+FTLAVIAAA GFVLWFQSLHTTKQRSPLRV+FEGPA+GLRNGG+VNFN Sbjct: 1 METRANYVLIGSFTLAVIAAAIGFVLWFQSLHTTKQRSPLRVVFEGPAAGLRNGGSVNFN 60 Query: 61 GIRIGEVVSVKLDNPRRVVALAMIENNAPLRKDTLVGLEFQGLTGVAAISLKGGEEAAPP 120 GIR+GEVVSVKLDNPRRVVALAM+ENNAP+RKDTLVGLEFQGLTGVAAISLKGGEEAAPP Sbjct: 61 GIRVGEVVSVKLDNPRRVVALAMVENNAPIRKDTLVGLEFQGLTGVAAISLKGGEEAAPP 120 Query: 121 VPLDEDGIPVLTADPNALQDVTEAIRATLQNVNRIVADNQQSVKNSLKNLEVFTQALARN 180 PLDEDGIP LTADPN LQDVTEAIR TLQN+N+IVADNQ+SVKNSLKNLE FT +LARN Sbjct: 121 PPLDEDGIPSLTADPNKLQDVTEAIRGTLQNINKIVADNQESVKNSLKNLETFTNSLARN 180 Query: 181 SEKIDNVMLKVDGVMGKADSLMLGLNAIAGGNNGSELNLMVKSIRELAEDLDKRSNLLIN 240 SEKID VM KVDGVM KAD+LMLGLN +AGG +G EL VKSIRELA+D DKRS LLI+ Sbjct: 181 SEKIDGVMAKVDGVMLKADNLMLGLNTLAGGKDGGELFQAVKSIRELADDFDKRSGLLIS 240 Query: 241 DGRRTLSDISRAVNNFDRNPSRVIFGGSNN 270 DGRRTL DISRAVNNFDRNP+RV+FG SN+ Sbjct: 241 DGRRTLGDISRAVNNFDRNPTRVLFGASNS 270 >ref|YP_001206996.1| ABC transporter periplasmic-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL78779.1| Putative ABC transporter (periplasmic binding protein) [Bradyrhizobium sp. ORS 278] Length = 293 Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust. Identities = 225/271 (83%), Positives = 254/271 (93%) Query: 1 METRANYVLIGAFTLAVIAAAFGFVLWFQSLHTTKQRSPLRVIFEGPASGLRNGGNVNFN 60 METRANYVLIG+FTLAV+AAA GFVLWFQSLHTTKQRSPLRV+FEGPA+GLRNGG+VNFN Sbjct: 1 METRANYVLIGSFTLAVLAAAVGFVLWFQSLHTTKQRSPLRVVFEGPAAGLRNGGSVNFN 60 Query: 61 GIRIGEVVSVKLDNPRRVVALAMIENNAPLRKDTLVGLEFQGLTGVAAISLKGGEEAAPP 120 GIR+GEV+SVKLDNPRRVVALAM+ENNAP+RKDTLVGLEFQGLTGVAAISLKGGEEAAPP Sbjct: 61 GIRVGEVISVKLDNPRRVVALAMVENNAPIRKDTLVGLEFQGLTGVAAISLKGGEEAAPP 120 Query: 121 VPLDEDGIPVLTADPNALQDVTEAIRATLQNVNRIVADNQQSVKNSLKNLEVFTQALARN 180 PLDEDG+P+L ADP LQDVTEAIRATLQN+N++VADNQ++VKNS+KNLEVFTQ+LARN Sbjct: 121 PPLDEDGVPLLRADPTRLQDVTEAIRATLQNINKVVADNQEAVKNSIKNLEVFTQSLARN 180 Query: 181 SEKIDNVMLKVDGVMGKADSLMLGLNAIAGGNNGSELNLMVKSIRELAEDLDKRSNLLIN 240 SE+ID VM +VDG+MGKAD+LMLGLN +AGG +G EL L VKSIRELAED DKRS L+ Sbjct: 181 SERIDGVMSRVDGIMGKADTLMLGLNTLAGGKDGGELFLTVKSIRELAEDFDKRSGALMA 240 Query: 241 DGRRTLSDISRAVNNFDRNPSRVIFGGSNNA 271 DGRRTLSDISRAVNNFDRNP+RV+FG SN++ Sbjct: 241 DGRRTLSDISRAVNNFDRNPTRVLFGASNSS 271 >ref|YP_568776.1| hypothetical protein RPD_1638 [Rhodopseudomonas palustris BisB5] gb|ABE38875.1| Mammalian cell entry related [Rhodopseudomonas palustris BisB5] Length = 317 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 206/279 (73%), Positives = 248/279 (88%) Query: 1 METRANYVLIGAFTLAVIAAAFGFVLWFQSLHTTKQRSPLRVIFEGPASGLRNGGNVNFN 60 METRANY LIG FTLAVIAAAFGFVLWFQSLH+TK RSPLRV+FEG ASGLRNGG+VNFN Sbjct: 15 METRANYFLIGTFTLAVIAAAFGFVLWFQSLHSTKARSPLRVVFEGAASGLRNGGSVNFN 74 Query: 61 GIRIGEVVSVKLDNPRRVVALAMIENNAPLRKDTLVGLEFQGLTGVAAISLKGGEEAAPP 120 G+R+GEV+SVKLDNP+RVVALAM+EN AP+RKDTLVGLEFQGLTGVAAISLKGG ++APP Sbjct: 75 GVRVGEVISVKLDNPKRVVALAMVENTAPIRKDTLVGLEFQGLTGVAAISLKGGLDSAPP 134 Query: 121 VPLDEDGIPVLTADPNALQDVTEAIRATLQNVNRIVADNQQSVKNSLKNLEVFTQALARN 180 VPLDEDG+PVLTADP L D++E+++ATL+N+N++VA+N ++VK SL NL+ FT +LAR+ Sbjct: 135 VPLDEDGVPVLTADPELLMDISESVKATLRNLNKVVAENAETVKESLSNLQTFTASLARS 194 Query: 181 SEKIDNVMLKVDGVMGKADSLMLGLNAIAGGNNGSELNLMVKSIRELAEDLDKRSNLLIN 240 S+KID++M+KVDGV+GK DS+M G++A+AGG +G EL VKS RELA++LDKRSN LI Sbjct: 195 SDKIDSIMVKVDGVIGKTDSVMQGIDALAGGKDGGELFQAVKSFRELADNLDKRSNALII 254 Query: 241 DGRRTLSDISRAVNNFDRNPSRVIFGGSNNAAPEPAPAP 279 DGRRTL DISRAVNN DRNP+R++FG SNNAA E A P Sbjct: 255 DGRRTLVDISRAVNNLDRNPTRLLFGPSNNAAQEQAAPP 293 >ref|YP_485249.1| hypothetical protein RPB_1629 [Rhodopseudomonas palustris HaA2] gb|ABD06338.1| Mammalian cell entry related [Rhodopseudomonas palustris HaA2] Length = 291 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 203/271 (74%), Positives = 245/271 (90%) Query: 1 METRANYVLIGAFTLAVIAAAFGFVLWFQSLHTTKQRSPLRVIFEGPASGLRNGGNVNFN 60 METRANY LIG FTLAVIAAAFGFVLWFQSLH+TK RSPLRV+FEG A+GLRNGG+VNFN Sbjct: 1 METRANYFLIGVFTLAVIAAAFGFVLWFQSLHSTKARSPLRVVFEGSATGLRNGGSVNFN 60 Query: 61 GIRIGEVVSVKLDNPRRVVALAMIENNAPLRKDTLVGLEFQGLTGVAAISLKGGEEAAPP 120 G+R+GEV+SVKLDNP+RVVALAM+EN AP+RKDTLVGLEFQGLTGVAAISLKGG E APP Sbjct: 61 GVRVGEVISVKLDNPKRVVALAMVENTAPIRKDTLVGLEFQGLTGVAAISLKGGMETAPP 120 Query: 121 VPLDEDGIPVLTADPNALQDVTEAIRATLQNVNRIVADNQQSVKNSLKNLEVFTQALARN 180 VPLDEDG+PVLTADP+ L D++E+++ATL+NVN++VA+N ++VK SL NL+VFT +LAR+ Sbjct: 121 VPLDEDGVPVLTADPDLLMDISESVKATLRNVNKVVAENAETVKESLSNLQVFTSSLARS 180 Query: 181 SEKIDNVMLKVDGVMGKADSLMLGLNAIAGGNNGSELNLMVKSIRELAEDLDKRSNLLIN 240 S+KID++M KVDGV+GK DS+M G++A+AGG +G EL VKS RELA++LDKRS+ LI Sbjct: 181 SDKIDSIMAKVDGVIGKTDSVMQGIDALAGGKDGGELFQAVKSFRELADNLDKRSSALII 240 Query: 241 DGRRTLSDISRAVNNFDRNPSRVIFGGSNNA 271 DGRRTL+DISRA+NNFDRNP+RV+FG SN A Sbjct: 241 DGRRTLADISRAINNFDRNPTRVLFGPSNTA 271