BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0007.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004681081.1| (R)-benzylsuccinyl-CoA dehydrogenase BbsG [C... 474 e-131 ref|YP_729070.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]... 471 e-131 ref|ZP_01616079.1| Acyl-CoA dehydrogenase [marine gamma proteoba... 456 e-126 ref|YP_998591.1| acyl-CoA dehydrogenase domain-containing protei... 452 e-125 gb|EGD05688.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49] 446 e-123 >ref|YP_004681081.1| (R)-benzylsuccinyl-CoA dehydrogenase BbsG [Cupriavidus necator N-1] gb|AEI79849.1| (R)-benzylsuccinyl-CoA dehydrogenase BbsG [Cupriavidus necator N-1] Length = 388 Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust. Identities = 232/384 (60%), Positives = 289/384 (75%), Gaps = 4/384 (1%) Query: 4 DEQTAMIRETVARFVDRELIPLEPHYLKSKLPGSDHPELTSEQRKRLRDVSKELGLWGLD 63 DE+ M+++ VARFV +LIPLEP L + G L E+ RL +S+ELGLWGLD Sbjct: 6 DEEHGMLKDLVARFVRDQLIPLEPAVLAREAAGGQM-TLLPEEHARLDAMSRELGLWGLD 64 Query: 64 APEDLGGHDLPTRTMAAVHEELGRSCVPFVLPPDSPNLRMLQAVGTDAQKKKYLQPYIEG 123 AP ++GG DLPT M V+EELG++ P+ LPPDSPNLRML ++AQ+++YL PY G Sbjct: 65 APTEMGGADLPTVAMVGVNEELGKTITPYELPPDSPNLRMLMLSASEAQRERYLAPYARG 124 Query: 124 RMASAIAISEPGAGGDPAGMKTRAVLEGEQWVLNGRKIWISNARAADFIIVMARVGNDQR 183 SAIAISEPGAGGDPA M TRA +G+QWVLNGRKIWIS A AD+ IVMA V + R Sbjct: 125 ETVSAIAISEPGAGGDPAMMTTRAERDGDQWVLNGRKIWISRAARADWTIVMA-VTDKAR 183 Query: 184 --QGGITSFIVEKGTAGFIIEREIPMVGGGSTYEIVFEDCRIPKDSVLGEVGKGYAPMQL 241 +GGI++FIVE+GT GF +ER IPM+GG STYE+V EDCRIP +LG G+G+APMQ Sbjct: 184 GARGGISAFIVERGTPGFKVERRIPMIGGASTYEVVLEDCRIPAAQLLGTEGQGFAPMQA 243 Query: 242 RLRTRRLEMGSTCVGITKRALDMMCEHAKQRETFGVKLAERQAIQWWIADISTRMHACRL 301 RL TRR++M + C+G +RALDM+CE+A QR+TFG LA+RQAIQWW+AD +TR+HACRL Sbjct: 244 RLSTRRVQMAAWCIGRAQRALDMICEYAPQRQTFGAPLAQRQAIQWWVADAATRIHACRL 303 Query: 302 MVREAADKTDRGEDIRHEASMIKVFATEMAYDACDHAMQTLGALGVTLELPLNALWQKAR 361 M EAA + D G++ R + SMIKVFATEMA+D DHAMQT GA+G+T ELPL + + R Sbjct: 304 MTYEAASRIDAGDEARTQVSMIKVFATEMAWDVIDHAMQTFGAMGMTKELPLQQMANETR 363 Query: 362 LMRVYEGPSEVHRQAIARRVLGLR 385 LMR+YEGPSEVHR IAR +LGLR Sbjct: 364 LMRIYEGPSEVHRWVIARDLLGLR 387 >ref|YP_729070.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] emb|CAJ95705.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 388 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 229/383 (59%), Positives = 286/383 (74%), Gaps = 2/383 (0%) Query: 4 DEQTAMIRETVARFVDRELIPLEPHYLKSKLPGSDHPELTSEQRKRLRDVSKELGLWGLD 63 D++ M+++ VARFV +LIPLEP L + G L E+ RL +S+ELGLWGLD Sbjct: 6 DDEHRMLKDLVARFVREQLIPLEPAVLAREAAGGQM-TLLPEEHARLDAMSRELGLWGLD 64 Query: 64 APEDLGGHDLPTRTMAAVHEELGRSCVPFVLPPDSPNLRMLQAVGTDAQKKKYLQPYIEG 123 AP ++GG DLPT M V+EELG++ P+ LPPDSPNLRML ++AQ+++YL PY G Sbjct: 65 APTEMGGADLPTVAMVGVNEELGKTITPYELPPDSPNLRMLMLSASEAQRERYLAPYARG 124 Query: 124 RMASAIAISEPGAGGDPAGMKTRAVLEGEQWVLNGRKIWISNARAADFIIVMARVGNDQ- 182 SAIAISEPGAGGDPA M TRA +GE WVLNGRKIWIS A AD+ IVMA + Sbjct: 125 ETVSAIAISEPGAGGDPAMMTTRAERDGEHWVLNGRKIWISRAARADWTIVMAVTDKAKG 184 Query: 183 RQGGITSFIVEKGTAGFIIEREIPMVGGGSTYEIVFEDCRIPKDSVLGEVGKGYAPMQLR 242 +GGI++FIVE+GT GF +ER IPM+GG STYE+V EDCRIP +LG G+G+APMQ R Sbjct: 185 ARGGISAFIVERGTPGFRVERRIPMIGGASTYEVVLEDCRIPASQLLGTEGQGFAPMQAR 244 Query: 243 LRTRRLEMGSTCVGITKRALDMMCEHAKQRETFGVKLAERQAIQWWIADISTRMHACRLM 302 L TRR++M + C+G +RALDM+CE+A QR+TFG LA+RQAIQWW+AD +TR+HACRLM Sbjct: 245 LSTRRVQMAAWCIGRAQRALDMICEYAPQRQTFGAPLAQRQAIQWWVADAATRIHACRLM 304 Query: 303 VREAADKTDRGEDIRHEASMIKVFATEMAYDACDHAMQTLGALGVTLELPLNALWQKARL 362 EAA + D G++ R + SMIKVFATEMA+D DHAMQT GA+G+T ELPL + + RL Sbjct: 305 TYEAASRIDAGDEARTQVSMIKVFATEMAWDVIDHAMQTFGAMGMTKELPLQQMANETRL 364 Query: 363 MRVYEGPSEVHRQAIARRVLGLR 385 MR+YEGPSEVHR IAR +LGLR Sbjct: 365 MRIYEGPSEVHRWVIARDLLGLR 387 >ref|ZP_01616079.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] gb|EAW33162.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] Length = 384 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 213/376 (56%), Positives = 277/376 (73%), Gaps = 1/376 (0%) Query: 5 EQTAMIRETVARFVDRELIPLEPHYLKSKLPGSDHPELTSEQRKRLRDVSKELGLWGLDA 64 E+ ++ V +FV ++L+PLE YL ++ G + P LT+E+ + K+LGLWGLD Sbjct: 7 EEYRQLQTLVEKFVQQQLVPLEQAYLAREISG-EKPGLTNEESAIINQKCKDLGLWGLDC 65 Query: 65 PEDLGGHDLPTRTMAAVHEELGRSCVPFVLPPDSPNLRMLQAVGTDAQKKKYLQPYIEGR 124 PE GG DLP M V+EE+GR+ VPF PPDSPNL ML A D Q ++Y++PY G Sbjct: 66 PEQSGGADLPAIAMVGVNEEIGRTVVPFHFPPDSPNLHMLLATANDYQTQRYVEPYARGE 125 Query: 125 MASAIAISEPGAGGDPAGMKTRAVLEGEQWVLNGRKIWISNARAADFIIVMARVGNDQRQ 184 SAIAISEPGAG DPAGM T+AV +G++WVLNGRKIW+S ADF I+MA + Sbjct: 126 AVSAIAISEPGAGSDPAGMITKAVRDGDEWVLNGRKIWVSRVDEADFTILMAVTEPGKGN 185 Query: 185 GGITSFIVEKGTAGFIIEREIPMVGGGSTYEIVFEDCRIPKDSVLGEVGKGYAPMQLRLR 244 GI++FI+EK T GFII R IPM+GG +T+EI +DCR+P +LGE+GKG+APMQLRL Sbjct: 186 AGISAFIIEKDTPGFIISRHIPMIGGHTTFEITLDDCRLPATQLLGELGKGFAPMQLRLV 245 Query: 245 TRRLEMGSTCVGITKRALDMMCEHAKQRETFGVKLAERQAIQWWIADISTRMHACRLMVR 304 RRL+MG+ CVG+ +RA+D++CE+AK R TFG LA+RQA+QWW+AD ++HACRLM++ Sbjct: 246 IRRLQMGAWCVGMARRAVDIICEYAKNRNTFGASLADRQAVQWWVADAEIKIHACRLMLQ 305 Query: 305 EAADKTDRGEDIRHEASMIKVFATEMAYDACDHAMQTLGALGVTLELPLNALWQKARLMR 364 +AA K DRGED+R EASM+KV+ TE+A D D AMQT GA+G+T ELPLN + Q+ R MR Sbjct: 306 QAAWKQDRGEDVRTEASMVKVYGTELATDIIDQAMQTCGAMGMTKELPLNMMAQQVRTMR 365 Query: 365 VYEGPSEVHRQAIARR 380 VYEGPSE+HR IARR Sbjct: 366 VYEGPSEIHRMVIARR 381 >ref|YP_998591.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gb|ABM59573.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 388 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/385 (57%), Positives = 285/385 (74%), Gaps = 6/385 (1%) Query: 4 DEQTAMIRETVARFVDRELIPLEPHYLKSKLPGSDHPELTSEQRKRLRDVSKELGLWGLD 63 +E+ MI++ VARFV +L+PLE L ++ + L E+++RL +S+ELGLWGLD Sbjct: 6 EEEHQMIQDLVARFVREQLMPLESSAL-AREASTGVLALLPEEQERLDALSRELGLWGLD 64 Query: 64 APEDLGGHDLPTRTMAAVHEELGRSCVPFVLPPDSPNLRMLQAVGTDAQKKKYLQPYIEG 123 AP ++ GHDLP M V+EELG++ P+ LPPDSPNLRML +Q+++YL PY G Sbjct: 65 APAEMDGHDLPVVAMVGVNEELGKTITPYDLPPDSPNLRMLMQTANASQRERYLAPYARG 124 Query: 124 RMASAIAISEPGAGGDPAGMKTRAVLEGEQWVLNGRKIWISNARAADFIIVMARVGNDQR 183 ASAIAISEPGAGGDP+ M TRAV EG+ W LNGRKIWIS A AD+ IVM V D+ Sbjct: 125 ETASAIAISEPGAGGDPSMMSTRAVREGDDWTLNGRKIWISKADKADWTIVM--VVTDKA 182 Query: 184 ---QGGITSFIVEKGTAGFIIEREIPMVGGGSTYEIVFEDCRIPKDSVLGEVGKGYAPMQ 240 +GGI++FIV+KGT GF +ER IPM+GG STYE+V EDCR+P +LG+ G G+APMQ Sbjct: 183 LGARGGISAFIVDKGTPGFKVERRIPMIGGVSTYEVVLEDCRVPGTQLLGQEGAGFAPMQ 242 Query: 241 LRLRTRRLEMGSTCVGITKRALDMMCEHAKQRETFGVKLAERQAIQWWIADISTRMHACR 300 RL +RR++M + C+G +RALDM+CE+A QR TFG LAERQAIQWW+AD +TR+HACR Sbjct: 243 ARLSSRRVQMAAWCIGRAQRALDMICEYAPQRRTFGAPLAERQAIQWWVADAATRIHACR 302 Query: 301 LMVREAADKTDRGEDIRHEASMIKVFATEMAYDACDHAMQTLGALGVTLELPLNALWQKA 360 LM +AA + D G++ R + SMIKVFATEMA++ D AMQ LGA+G+T ELPL + + Sbjct: 303 LMTYDAAARIDAGDEARTQVSMIKVFATEMAWEVIDRAMQALGAMGMTKELPLQQMANET 362 Query: 361 RLMRVYEGPSEVHRQAIARRVLGLR 385 RLMR+YEGPSEVHR IAR +LGL+ Sbjct: 363 RLMRIYEGPSEVHRWVIARDLLGLK 387 >gb|EGD05688.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49] Length = 384 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 218/375 (58%), Positives = 276/375 (73%), Gaps = 2/375 (0%) Query: 9 MIRETVARFVDRELIPLEPHYLKSKLPGSDHPELTSEQRKRLRDVSKELGLWGLDAPEDL 68 MIR+ VARFV+ ELIPLE L ++ S L ++R RL + SK+LGLWGLDAP DL Sbjct: 11 MIRDLVARFVNDELIPLEAAVL-AREAESGRFALHDDERTRLDERSKQLGLWGLDAPLDL 69 Query: 69 GGHDLPTRTMAAVHEELGRSCVPFVLPPDSPNLRMLQAVGTDAQKKKYLQPYIEGRMASA 128 GG DLP M V+E +G + P+ LPPDSPNLRML+ DAQ+ +YL PY G +A Sbjct: 70 GGADLPALAMIGVNEAMGATVTPYTLPPDSPNLRMLRDTADDAQRDRYLAPYARGITRAA 129 Query: 129 IAISEPGAGGDPAGMKTRAVLEGEQWVLNGRKIWISNARAADFIIVMARVGNDQ-RQGGI 187 +AISEPGAG DP+ M T A +G+ WVLNGRKIWIS+AR AD+ IVMA + ++GGI Sbjct: 130 MAISEPGAGSDPSAMTTTAARDGDAWVLNGRKIWISHARDADWTIVMALTDRSKGKRGGI 189 Query: 188 TSFIVEKGTAGFIIEREIPMVGGGSTYEIVFEDCRIPKDSVLGEVGKGYAPMQLRLRTRR 247 ++FIVE+ T GF++ER IPM+GG STYEIV +DCRIP +LG G G+APMQ RL RR Sbjct: 190 SAFIVERDTPGFVVERRIPMIGGLSTYEIVLQDCRIPAAQLLGREGDGFAPMQARLANRR 249 Query: 248 LEMGSTCVGITKRALDMMCEHAKQRETFGVKLAERQAIQWWIADISTRMHACRLMVREAA 307 L+M + C+G RA+ ++C++AKQR+TFGV LAERQA+QWW+AD T++HACRLM EAA Sbjct: 250 LQMAAWCIGRAGRAVALLCDYAKQRKTFGVPLAERQAVQWWVADALTQIHACRLMTLEAA 309 Query: 308 DKTDRGEDIRHEASMIKVFATEMAYDACDHAMQTLGALGVTLELPLNALWQKARLMRVYE 367 + D G+D R + SM+KVFATEMA DHAMQTLGA+G+T ELPL + +ARLMR++E Sbjct: 310 ARVDAGQDARTQISMVKVFATEMASSVIDHAMQTLGAMGMTKELPLQQMASEARLMRIFE 369 Query: 368 GPSEVHRQAIARRVL 382 GPSEVHR +AR VL Sbjct: 370 GPSEVHRWVVARSVL 384