BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0183.0032.p         (121 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001241391.1| hypothetical protein BBta_5525 [Bradyrhizobi...   166   9e-40
ref|NP_945719.1| hypothetical protein RPA0366 [Rhodopseudomonas ...   150   5e-35
ref|YP_484078.1| hypothetical protein RPB_0456 [Rhodopseudomonas...   149   2e-34
ref|ZP_08630676.1| hypothetical protein CSIRO_3786 [Bradyrhizobi...   147   4e-34
ref|YP_317721.1| hypothetical protein Nwi_1107 [Nitrobacter wino...   145   2e-33

>ref|YP_001241391.1| hypothetical protein BBta_5525 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37485.1| hypothetical protein BBta_5525 [Bradyrhizobium sp. BTAi1]
          Length = 122

 Score =  166 bits (421), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 96/122 (78%), Gaps = 1/122 (0%)

Query: 1   MADVLSILSANYKAAGL-TVPSKTPYVAVDPNLYEGSWSGKYANNKSFNISVSNVDGFRA 59
           MAD+  ILSA+YK++ L T      YVAVDP+LY+GSWSGKYAN KSF +SVSNVDGFRA
Sbjct: 1   MADITGILSASYKSSVLNTAHGSGRYVAVDPSLYQGSWSGKYANGKSFTVSVSNVDGFRA 60

Query: 60  KVHYQSDGTSKYQDVLIKDGGFRIGDTKFALVQQGTALIANVVTDPATGATYLDKAYATQ 119
           KV YQS+G SKYQ+VLIKD  FR+GDTKF L  +G A I NVVTD A+G TYLD AYATQ
Sbjct: 61  KVRYQSEGVSKYQEVLIKDNAFRVGDTKFTLTAKGKAQIKNVVTDAASGQTYLDTAYATQ 120

Query: 120 KT 121
            +
Sbjct: 121 SS 122


>ref|NP_945719.1| hypothetical protein RPA0366 [Rhodopseudomonas palustris CGA009]
 ref|YP_001989406.1| hypothetical protein Rpal_0370 [Rhodopseudomonas palustris TIE-1]
 emb|CAE25810.1| unknown protein [Rhodopseudomonas palustris CGA009]
 gb|ACE98930.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 120

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 72/112 (64%), Positives = 87/112 (77%)

Query: 1   MADVLSILSANYKAAGLTVPSKTPYVAVDPNLYEGSWSGKYANNKSFNISVSNVDGFRAK 60
           MAD++S+L++ Y +A L  PSKT YV VDP LY G+W+G Y+N K F+I+VS+V GFRA+
Sbjct: 1   MADIMSVLASGYSSAALQTPSKTKYVNVDPALYSGTWTGTYSNTKKFSITVSDVQGFRAQ 60

Query: 61  VHYQSDGTSKYQDVLIKDGGFRIGDTKFALVQQGTALIANVVTDPATGATYL 112
           V YQS+GT KYQ VLIKDG FRIGDTKFAL +  TA I NVVTD ATG T L
Sbjct: 61  VKYQSEGTVKYQSVLIKDGAFRIGDTKFALGKNDTASIRNVVTDAATGQTQL 112


>ref|YP_484078.1| hypothetical protein RPB_0456 [Rhodopseudomonas palustris HaA2]
 gb|ABD05167.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 120

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 84/112 (75%)

Query: 1   MADVLSILSANYKAAGLTVPSKTPYVAVDPNLYEGSWSGKYANNKSFNISVSNVDGFRAK 60
           MAD++S+L++ Y AAGL  PSKTPYV VD  LYEG+WSG Y+N K F I+VSNV GFRA+
Sbjct: 1   MADIMSVLASGYTAAGLLNPSKTPYVNVDAKLYEGTWSGTYSNTKKFAITVSNVQGFRAQ 60

Query: 61  VHYQSDGTSKYQDVLIKDGGFRIGDTKFALVQQGTALIANVVTDPATGATYL 112
           V YQS+GT KYQ VLIKDG FRIGD+KF L   G+A I   +TDP T  T L
Sbjct: 61  VKYQSEGTIKYQTVLIKDGSFRIGDSKFTLGSNGSASIRTAITDPVTSQTSL 112


>ref|ZP_08630676.1| hypothetical protein CSIRO_3786 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP06530.1| hypothetical protein CSIRO_3786 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 121

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 75/120 (62%), Positives = 89/120 (74%), Gaps = 1/120 (0%)

Query: 1   MADVLSILSANYKAAGLTVP-SKTPYVAVDPNLYEGSWSGKYANNKSFNISVSNVDGFRA 59
           M+D+ SIL +NY A G  V  SK PYVAVD   YEG+W+GKYANN  F+I VSNV GFRA
Sbjct: 1   MSDIYSILQSNYVAVGSNVNYSKGPYVAVDAASYEGNWTGKYANNDQFSIQVSNVVGFRA 60

Query: 60  KVHYQSDGTSKYQDVLIKDGGFRIGDTKFALVQQGTALIANVVTDPATGATYLDKAYATQ 119
           KV YQS  T KYQDVLI+D  FR+GD+KF L +QGTA I  V+T+PATGA  ++ AYA Q
Sbjct: 61  KVRYQSGTTVKYQDVLIRDNSFRVGDSKFTLTKQGTAQIKTVMTNPATGAQSMETAYAKQ 120


>ref|YP_317721.1| hypothetical protein Nwi_1107 [Nitrobacter winogradskyi Nb-255]
 gb|ABA04369.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 121

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)

Query: 1   MADVLSILSANYKAAGLTVPSKT-PYVAVDPNLYEGSWSGKYANNKSFNISVSNVDGFRA 59
           MADVL+IL++NY+  G  V   T  YV VDP+++EG+WSGKYAN K F+I++SNV+GFRA
Sbjct: 1   MADVLNILASNYRTVGENVSLTTGKYVNVDPDVFEGTWSGKYANQKPFSITISNVNGFRA 60

Query: 60  KVHYQSDGTSKYQDVLIKDGGFRIGDTKFALVQQGTALIANVVTDPATGATYLDKAYATQ 119
           K  YQ   T KYQ+VLIK+ GFR+GD+KF L + GTA ++ V++DPATGA+ L+ AY  Q
Sbjct: 61  KAKYQYGTTIKYQEVLIKNNGFRVGDSKFVLTKTGTAQVSTVMSDPATGASTLETAYVHQ 120

Query: 120 K 120
           +
Sbjct: 121 R 121