BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0183.0026.p         (128 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772476.1| transcriptional regulator PadR [Bradyrhizobium ...   218   2e-55
ref|YP_001206961.1| MarR family transcriptional regulator [Brady...   210   7e-53
ref|YP_001241385.1| putative transcriptional regulator [Bradyrhi...   207   4e-52
ref|YP_003449160.1| HTH-type transcriptional regulator [Azospiri...   165   2e-39
ref|YP_001523337.1| transcriptional regulator [Azorhizobium caul...   163   9e-39

>ref|NP_772476.1| transcriptional regulator PadR [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51101.1| transcriptional regulatory protein PadR- [Bradyrhizobium japonicum
           USDA 110]
          Length = 123

 Score =  218 bits (555), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 108/123 (87%), Positives = 113/123 (91%)

Query: 6   LKPDAYAANCPTRQILDRVGDKWAVLILLLLRGEPMRFNQLRRAIEGISQKMLSQVLKSL 65
           +KPD YAANCPTRQILDRVGDKWAVLILLLLR EPMRFNQLRR IEGISQKMLSQVLKSL
Sbjct: 1   MKPDVYAANCPTRQILDRVGDKWAVLILLLLREEPMRFNQLRRTIEGISQKMLSQVLKSL 60

Query: 66  ERDGLLRRRAIATVPVTVEYSITPLGSTLAEAVDPLRDWAEQNLKDVLAAQRRYDAQRKA 125
           ERDGL++R AIATVPVTVEYSIT LG TLA AVDPLRDWAEQNLKDVLAAQR YDAQ++ 
Sbjct: 61  ERDGLIKRLAIATVPVTVEYSITQLGLTLAAAVDPLRDWAEQNLKDVLAAQRHYDAQKEE 120

Query: 126 LAA 128
            AA
Sbjct: 121 EAA 123


>ref|YP_001206961.1| MarR family transcriptional regulator [Bradyrhizobium sp. ORS 278]
 emb|CAL78744.1| putative transcriptional regulatory protein, related to MarR family
           [Bradyrhizobium sp. ORS 278]
          Length = 124

 Score =  210 bits (534), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 103/120 (85%), Positives = 113/120 (94%)

Query: 9   DAYAANCPTRQILDRVGDKWAVLILLLLRGEPMRFNQLRRAIEGISQKMLSQVLKSLERD 68
           + Y+A+CPTRQILDRVGDKWAVLIL+LLR EP+RFNQLRRAIEGISQKMLSQVLKSLERD
Sbjct: 5   NVYSADCPTRQILDRVGDKWAVLILILLRNEPLRFNQLRRAIEGISQKMLSQVLKSLERD 64

Query: 69  GLLRRRAIATVPVTVEYSITPLGSTLAEAVDPLRDWAEQNLKDVLAAQRRYDAQRKALAA 128
           GL+RRRAIATVPVTVEYSITPLG TLA AVDPLRDWAE++LKDV AAQRRYDAQ+ + AA
Sbjct: 65  GLVRRRAIATVPVTVEYSITPLGLTLAAAVDPLRDWAERHLKDVTAAQRRYDAQQPSKAA 124


>ref|YP_001241385.1| putative transcriptional regulator [Bradyrhizobium sp. BTAi1]
 gb|ABQ37479.1| putative transcriptional regulatory protein [Bradyrhizobium sp.
           BTAi1]
          Length = 124

 Score =  207 bits (527), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 101/120 (84%), Positives = 112/120 (93%)

Query: 9   DAYAANCPTRQILDRVGDKWAVLILLLLRGEPMRFNQLRRAIEGISQKMLSQVLKSLERD 68
           + Y+A+CPTRQILDRVGDKWAVLIL+LLR +P+RFNQLRR IEGISQKMLSQVLKSLERD
Sbjct: 5   NVYSADCPTRQILDRVGDKWAVLILILLRNQPLRFNQLRRTIEGISQKMLSQVLKSLERD 64

Query: 69  GLLRRRAIATVPVTVEYSITPLGSTLAEAVDPLRDWAEQNLKDVLAAQRRYDAQRKALAA 128
           GL+RRRAIATVPVTVEYSITPLG TLA AVDPLRDWAE++LKDV AAQRRYDAQ+ + AA
Sbjct: 65  GLVRRRAIATVPVTVEYSITPLGLTLAAAVDPLRDWAERHLKDVSAAQRRYDAQQTSKAA 124


>ref|YP_003449160.1| HTH-type transcriptional regulator [Azospirillum sp. B510]
 dbj|BAI72616.1| HTH-type transcriptional regulator [Azospirillum sp. B510]
          Length = 147

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/113 (70%), Positives = 90/113 (79%)

Query: 8   PDAYAANCPTRQILDRVGDKWAVLILLLLRGEPMRFNQLRRAIEGISQKMLSQVLKSLER 67
           PDAY + CPTRQ LDR+ DKW VLIL LL   PMRFNQLRR IEGISQKMLSQ LKSLER
Sbjct: 22  PDAYVSACPTRQALDRIADKWTVLILGLLESGPMRFNQLRREIEGISQKMLSQTLKSLER 81

Query: 68  DGLLRRRAIATVPVTVEYSITPLGSTLAEAVDPLRDWAEQNLKDVLAAQRRYD 120
           DGL+ R+  ATVPVTVEY+ITPLG+TLAE + PLR WAE ++  VL A+  YD
Sbjct: 82  DGLVSRKVFATVPVTVEYAITPLGATLAETLVPLRVWAETHITRVLEARAAYD 134


>ref|YP_001523337.1| transcriptional regulator [Azorhizobium caulinodans ORS 571]
 dbj|BAF86419.1| putative transcriptional regulator [Azorhizobium caulinodans ORS
           571]
          Length = 142

 Score =  163 bits (412), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 77/120 (64%), Positives = 95/120 (79%)

Query: 4   TSLKPDAYAANCPTRQILDRVGDKWAVLILLLLRGEPMRFNQLRRAIEGISQKMLSQVLK 63
           T L P+ YAA+CPTRQILDR+ DKWAVLIL LL  EP RFN LRR I+G+SQK+LSQ LK
Sbjct: 3   TDLPPNTYAADCPTRQILDRIADKWAVLILQLLADEPQRFNALRRKIQGLSQKVLSQTLK 62

Query: 64  SLERDGLLRRRAIATVPVTVEYSITPLGSTLAEAVDPLRDWAEQNLKDVLAAQRRYDAQR 123
           +LERDG + R A  TVPVTVEY++TPLG++LAE + PL  WAE ++KDV AA+  +D +R
Sbjct: 63  TLERDGFVTRTAFPTVPVTVEYALTPLGASLAETLTPLSRWAEAHIKDVEAARAAFDHRR 122