BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0183.0024.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772475.1| hypothetical protein bll5835 [Bradyrhizobium ja... 255 1e-66 ref|YP_001206959.1| putative NAD(P)-binding protein [Bradyrhizob... 254 2e-66 ref|YP_001241384.1| hypothetical protein BBta_5517 [Bradyrhizobi... 251 4e-65 ref|NP_354970.1| hypothetical protein Atu1999 [Agrobacterium tum... 228 2e-58 gb|EGP56624.1| hypothetical protein Agau_C200539 [Agrobacterium ... 227 3e-58 >ref|NP_772475.1| hypothetical protein bll5835 [Bradyrhizobium japonicum USDA 110] dbj|BAC51100.1| bll5835 [Bradyrhizobium japonicum USDA 110] Length = 203 Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 123/164 (75%), Positives = 137/164 (83%) Query: 1 VPNVTACKGDANDQAALAALWVGHDAAISSIHFLVSDPAKLIGAAKASGVGRYLVVGGAG 60 +PNVT KGD DQA LA LW GHD A+SS+HFL SD KLIGAAK S VGRYLVVGGAG Sbjct: 40 LPNVTPTKGDVLDQAGLARLWAGHDVAVSSVHFLASDALKLIGAAKDSKVGRYLVVGGAG 99 Query: 61 SLEVAPGVRLVTTSNFPPQYRAEASKGAEFLDLLRQEKDLNWTFLSPSVLFVAGERTGKF 120 SLEVAPGV+LVTT FP QY+AEA G+ FLDLLRQEK+LNWTF+SPS LFV GERT KF Sbjct: 100 SLEVAPGVKLVTTPGFPAQYKAEAEAGSAFLDLLRQEKELNWTFISPSALFVEGERTAKF 159 Query: 121 RLGTDQLLTAPDGKSSISFEDFAVALADEIERPAHIRRRFTVGY 164 RLGTDQLL +GKS ISF D+A+ALADE+ERPAH+R+RFTVGY Sbjct: 160 RLGTDQLLADANGKSWISFADYAIALADEVERPAHLRQRFTVGY 203 >ref|YP_001206959.1| putative NAD(P)-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL78742.1| conserved hypothetical protein; putative NAD(P)-binding protein [Bradyrhizobium sp. ORS 278] Length = 203 Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 126/162 (77%), Positives = 135/162 (83%) Query: 3 NVTACKGDANDQAALAALWVGHDAAISSIHFLVSDPAKLIGAAKASGVGRYLVVGGAGSL 62 NVTA +GDAND+AALA LW GHD AISSIHFL SD LIGAAK SGV RYLVVGGAGSL Sbjct: 42 NVTAVQGDANDRAALAKLWAGHDVAISSIHFLASDAEALIGAAKDSGVSRYLVVGGAGSL 101 Query: 63 EVAPGVRLVTTSNFPPQYRAEASKGAEFLDLLRQEKDLNWTFLSPSVLFVAGERTGKFRL 122 EVAPGVRLVTT NFP Y+AEA KGA FLD L+QEKDL+WTFLSPS + G RTGKFRL Sbjct: 102 EVAPGVRLVTTPNFPAAYKAEAEKGAAFLDRLKQEKDLDWTFLSPSAMIAFGARTGKFRL 161 Query: 123 GTDQLLTAPDGKSSISFEDFAVALADEIERPAHIRRRFTVGY 164 GTDQLL +GKS I+FEDFAVA+ADEIERPAH R RFTVGY Sbjct: 162 GTDQLLVDAEGKSFITFEDFAVAMADEIERPAHRRARFTVGY 203 >ref|YP_001241384.1| hypothetical protein BBta_5517 [Bradyrhizobium sp. BTAi1] gb|ABQ37478.1| hypothetical protein BBta_5517 [Bradyrhizobium sp. BTAi1] Length = 203 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 126/163 (77%), Positives = 133/163 (81%) Query: 2 PNVTACKGDANDQAALAALWVGHDAAISSIHFLVSDPAKLIGAAKASGVGRYLVVGGAGS 61 PNVTA KGDAND+A LA LW GHD AISSIHF SD LIGAAK SGV RYLVVGGAGS Sbjct: 41 PNVTAVKGDANDRAELARLWAGHDVAISSIHFSASDAETLIGAAKDSGVSRYLVVGGAGS 100 Query: 62 LEVAPGVRLVTTSNFPPQYRAEASKGAEFLDLLRQEKDLNWTFLSPSVLFVAGERTGKFR 121 LEVAPGVRLVTT FP Y+AEA KGA FLD LRQEK+L+WTFLSPS + G RTGKFR Sbjct: 101 LEVAPGVRLVTTPGFPAAYKAEAEKGAAFLDRLRQEKELDWTFLSPSAMIDFGSRTGKFR 160 Query: 122 LGTDQLLTAPDGKSSISFEDFAVALADEIERPAHIRRRFTVGY 164 LGTDQLL +GKS ISFEDFAVA+ADEIERPAH R RFTVGY Sbjct: 161 LGTDQLLVDAEGKSFISFEDFAVAMADEIERPAHRRARFTVGY 203 >ref|NP_354970.1| hypothetical protein Atu1999 [Agrobacterium tumefaciens str. C58] ref|ZP_08531356.1| hypothetical protein AGRO_5372 [Agrobacterium sp. ATCC 31749] gb|AAK87755.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] gb|EGL61901.1| hypothetical protein AGRO_5372 [Agrobacterium sp. ATCC 31749] Length = 203 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 113/164 (68%), Positives = 130/164 (79%), Gaps = 1/164 (0%) Query: 1 VPNVTACKGDANDQAALAALWVGHDAAISSIHFLVSDPAKLIGAAKASGVGRYLVVGGAG 60 +PNV A KGD DQAAL+ L GHDA ISS+HF SDPA LI A +ASGV RYLVVGGAG Sbjct: 41 LPNVVAKKGDVFDQAALSELLKGHDAVISSVHFTASDPATLIEAVRASGVQRYLVVGGAG 100 Query: 61 SLEVAPGVRLVTTSNFPPQYRAEASKGAEFLDLLRQEKDLNWTFLSPSVLFVAGERTGKF 120 SLE+APG R+V +FP Y+AEA+KGAEFLD L+QEK L+WTFLSPS FV GERTGKF Sbjct: 101 SLEIAPGQRVVDLPDFPAAYKAEATKGAEFLDKLKQEKQLDWTFLSPSAEFVPGERTGKF 160 Query: 121 RLGTDQLLTAPDGKSSISFEDFAVALADEIERPAHIRRRFTVGY 164 R+G D LL+ G S ISFED+A+ALADEIE+P H R+RFTVGY Sbjct: 161 RIGKDNLLSNEQG-SRISFEDYAIALADEIEKPQHSRQRFTVGY 203 >gb|EGP56624.1| hypothetical protein Agau_C200539 [Agrobacterium tumefaciens F2] Length = 203 Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 112/164 (68%), Positives = 130/164 (79%), Gaps = 1/164 (0%) Query: 1 VPNVTACKGDANDQAALAALWVGHDAAISSIHFLVSDPAKLIGAAKASGVGRYLVVGGAG 60 +PNV A KGD DQA L+ L GHDA ISS+HF SDPA LI A +ASGV RYLVVGGAG Sbjct: 41 LPNVVAKKGDIFDQAGLSELLKGHDAVISSVHFTASDPATLIEAVRASGVQRYLVVGGAG 100 Query: 61 SLEVAPGVRLVTTSNFPPQYRAEASKGAEFLDLLRQEKDLNWTFLSPSVLFVAGERTGKF 120 SLE+APG R+V +FP Y+AEA+KGAEFLD+L+QEK L+WTFLSPS FV GERTGKF Sbjct: 101 SLEIAPGQRVVDLPDFPAAYKAEATKGAEFLDILKQEKQLDWTFLSPSAEFVPGERTGKF 160 Query: 121 RLGTDQLLTAPDGKSSISFEDFAVALADEIERPAHIRRRFTVGY 164 RLG D LL+ +G S ISFED+A+AL DEIE+P H R+RFTVGY Sbjct: 161 RLGKDSLLSNDEG-SRISFEDYAIALVDEIEKPQHSRQRFTVGY 203