BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0183.0014.p         (114 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_534209.1| hypothetical protein RPC_4367 [Rhodopseudomonas...    70   9e-11
ref|YP_004380311.1| hypothetical protein MDS_2528 [Pseudomonas m...    70   1e-10
ref|YP_783336.1| hypothetical protein RPE_4432 [Rhodopseudomonas...    68   6e-10
ref|YP_001684194.1| hypothetical protein Caul_2569 [Caulobacter ...    65   3e-09
ref|YP_003592533.1| hypothetical protein Cseg_1425 [Caulobacter ...    64   8e-09

>ref|YP_534209.1| hypothetical protein RPC_4367 [Rhodopseudomonas palustris BisB18]
 gb|ABD89890.1| hypothetical protein RPC_4367 [Rhodopseudomonas palustris BisB18]
          Length = 107

 Score = 70.5 bits (171), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 51/72 (70%), Gaps = 1/72 (1%)

Query: 44  TAEQKFLKYAQMSPMDRMRANILKSMGMSEEDLKNMTPDQRAAVEQKIKELIEQAFQ-KN 102
           T E+KFL YA M+P +++R ++LKS+G++E+DLK M+P  R A+E KIKE I++A + + 
Sbjct: 36  TVEEKFLAYANMTPAEKLRDSLLKSIGVTEDDLKTMSPKDREAIEDKIKEKIKEAAENQT 95

Query: 103 AGKAGQAVDISA 114
             K G   DIS 
Sbjct: 96  EKKTGFITDISV 107


>ref|YP_004380311.1| hypothetical protein MDS_2528 [Pseudomonas mendocina NK-01]
 gb|AEB58559.1| hypothetical protein MDS_2528 [Pseudomonas mendocina NK-01]
          Length = 167

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 6/79 (7%)

Query: 13  SALGSVTASMTTGTLKKPLTADATGGSSLGDTAEQKFLKYAQMSPMDRMRANILKSMGMS 72
           +A G V   +++GT++KPL  D+      GD A  +F+ Y  M+P +++R  ILK MG++
Sbjct: 71  TAEGQVETGVSSGTVEKPLAEDS------GDAALAEFMAYMAMTPAEKIRYGILKEMGLT 124

Query: 73  EEDLKNMTPDQRAAVEQKI 91
           EED++ M+P+Q+ AVEQ+I
Sbjct: 125 EEDIEAMSPEQQQAVEQEI 143


>ref|YP_783336.1| hypothetical protein RPE_4432 [Rhodopseudomonas palustris BisA53]
 gb|ABJ08356.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 112

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 49/65 (75%)

Query: 44  TAEQKFLKYAQMSPMDRMRANILKSMGMSEEDLKNMTPDQRAAVEQKIKELIEQAFQKNA 103
           + E+KFL YA+MSP +++RA +L  +G++EE +K M+P+ +  VE+KI++LI+QA +K  
Sbjct: 39  SPEEKFLAYAKMSPAEKLRAALLSQLGLTEEKVKAMSPEDQQKVEEKIRDLIKQAAEKQM 98

Query: 104 GKAGQ 108
            K GQ
Sbjct: 99  EKTGQ 103


>ref|YP_001684194.1| hypothetical protein Caul_2569 [Caulobacter sp. K31]
 gb|ABZ71696.1| conserved hypothetical protein [Caulobacter sp. K31]
          Length = 116

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 12/110 (10%)

Query: 17  SVTASMTTGTLKK------PLTADATGG---SSLGDTAEQKFLKYAQMSPMDRMRANILK 67
           S+ AS+   TL K      P  A A  G   +  G +A+ +FL YA+M+P  RMRA++L 
Sbjct: 7   SILASLAAATLSKVNAVTAPKPAKAASGPMAAVPGKSAKDEFLDYAKMTPAQRMRASMLG 66

Query: 68  SMGMSEEDLKNMTPDQRAAVEQKIKELIEQAF---QKNAGKAGQAVDISA 114
            +G++EE L+ M P +R  +E KIKE++++      K+  + G  VD+ A
Sbjct: 67  KLGVTEEQLRAMDPKERQKIEDKIKEMVKEQVMSGDKDKPQKGALVDLKA 116


>ref|YP_003592533.1| hypothetical protein Cseg_1425 [Caulobacter segnis ATCC 21756]
 gb|ADG09915.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 102

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 52/75 (69%), Gaps = 1/75 (1%)

Query: 35  ATGGSSLGD-TAEQKFLKYAQMSPMDRMRANILKSMGMSEEDLKNMTPDQRAAVEQKIKE 93
           A+  S +G+ +A+ +FLK+   SP ++MRA +L  +G++EE LK M P++R  +E K+K+
Sbjct: 19  ASTSSPIGEPSAKDEFLKFQSKSPAEKMRAMMLAKLGVTEEQLKAMPPEERKKIEDKLKD 78

Query: 94  LIEQAFQKNAGKAGQ 108
           +++Q  Q + GK GQ
Sbjct: 79  MVKQQVQNDIGKKGQ 93