BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0183.0007.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576666.1| flagellar basal body rod protein FlgF [Nitrobac... 407 e-112 ref|YP_780468.1| flagellar basal body rod protein FlgF [Rhodopse... 394 e-108 ref|YP_317736.1| flagellar basal body rod protein FlgF [Nitrobac... 384 e-105 ref|YP_568821.1| flagellar basal body rod protein FlgF [Rhodopse... 374 e-101 ref|ZP_01046038.1| Flagellar basal body rod protein [Nitrobacter... 372 e-101 >ref|YP_576666.1| flagellar basal body rod protein FlgF [Nitrobacter hamburgensis X14] gb|ABE62206.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14] Length = 255 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/254 (75%), Positives = 223/254 (87%), Gaps = 1/254 (0%) Query: 1 MQNTLLVGLSKQMVLERQMDVVSNNIANMNTNGYKADRSLFQEYLSSNAHEDNFASSDRR 60 M+NTLL+GLS+QM+LERQMDVV+NN+AN+ TNGYKADRSLF+EYL AHEDNF DRR Sbjct: 1 MENTLLIGLSRQMMLERQMDVVANNVANVTTNGYKADRSLFEEYLMPGAHEDNFVGRDRR 60 Query: 61 VSFVQDRATFHDFSQGPTEETKNPLDVAIDGNAFLVVQTPGGERYTREGSLQINNRGQLV 120 +SFVQDRATFHDF+ GPTE+TKNPLDVAIDG AFLVVQTP GERYTR+G LQIN +GQLV Sbjct: 61 LSFVQDRATFHDFAGGPTEQTKNPLDVAIDGKAFLVVQTPAGERYTRDGGLQINAQGQLV 120 Query: 121 TASGYQVLGTAGPITFQQTDHDVSIAADGNITVLEGTSR-LDSIRGKLRLVSFAQAQRLL 179 TASG VLG+ GPITFQQTDHD++I+ DG +TVLEG + DSIRGKLRLVSFAQAQ+LL Sbjct: 121 TASGNPVLGSNGPITFQQTDHDITISNDGTVTVLEGVNNAADSIRGKLRLVSFAQAQKLL 180 Query: 180 KEGSNLYAPGEGTQALPDTKAQIRQGFIEKSNVNSVVEMSRMIEITRTYTQIASLLQQQS 239 KEGSNLY+ G G A PDT A++ QGFIEKSNVN+V EMSRM+E++R YTQ+A+LLQQQS Sbjct: 181 KEGSNLYSAGAGNSARPDTSARVHQGFIEKSNVNAVTEMSRMVEVSRAYTQMATLLQQQS 240 Query: 240 DLHKSAIEKLADVP 253 DL +SAIEKLADVP Sbjct: 241 DLQRSAIEKLADVP 254 >ref|YP_780468.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris BisA53] gb|ABJ05488.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisA53] Length = 254 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 184/253 (72%), Positives = 224/253 (88%) Query: 1 MQNTLLVGLSKQMVLERQMDVVSNNIANMNTNGYKADRSLFQEYLSSNAHEDNFASSDRR 60 M+N L+GLS+Q+ LERQMDVV+NN+ANMNT G+KA+R+LF+EYLS AHEDNF DRR Sbjct: 1 MENAQLIGLSRQVTLERQMDVVANNVANMNTTGFKAERTLFEEYLSPRAHEDNFVGRDRR 60 Query: 61 VSFVQDRATFHDFSQGPTEETKNPLDVAIDGNAFLVVQTPGGERYTREGSLQINNRGQLV 120 VS+VQDRATFHDFS GP E+TKNPLDVAIDG AFLVVQTP GERYTR+GSLQIN++GQLV Sbjct: 61 VSYVQDRATFHDFSSGPLEQTKNPLDVAIDGEAFLVVQTPAGERYTRDGSLQINSQGQLV 120 Query: 121 TASGYQVLGTAGPITFQQTDHDVSIAADGNITVLEGTSRLDSIRGKLRLVSFAQAQRLLK 180 TASGYQVLGT GPI FQ TD D++IAADGN++VLEGT+ +DS+RGKLRLV+FA AQ+L+K Sbjct: 121 TASGYQVLGTNGPIVFQSTDKDINIAADGNVSVLEGTATVDSLRGKLRLVNFANAQQLVK 180 Query: 181 EGSNLYAPGEGTQALPDTKAQIRQGFIEKSNVNSVVEMSRMIEITRTYTQIASLLQQQSD 240 EGSNLY+ G A DTKAQ+RQGFIEKSNVNSV+EM+RMI++TR YTQ++++LQQQ + Sbjct: 181 EGSNLYSAAGGAAAQQDTKAQVRQGFIEKSNVNSVMEMTRMIDVTRAYTQLSAMLQQQGE 240 Query: 241 LHKSAIEKLADVP 253 L ++A+EKLA+VP Sbjct: 241 LRRTALEKLAEVP 253 >ref|YP_317736.1| flagellar basal body rod protein FlgF [Nitrobacter winogradskyi Nb-255] gb|ABA04384.1| Flagellar basal body rod protein [Nitrobacter winogradskyi Nb-255] Length = 255 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 182/254 (71%), Positives = 219/254 (86%), Gaps = 1/254 (0%) Query: 1 MQNTLLVGLSKQMVLERQMDVVSNNIANMNTNGYKADRSLFQEYLSSNAHEDNFASSDRR 60 M+NTLL+GLS+QM+LERQMDV++NN+AN+ TNGYKAD SLF EYL AHEDNF DRR Sbjct: 1 MENTLLIGLSRQMMLERQMDVIANNVANVTTNGYKADHSLFNEYLMPGAHEDNFVGRDRR 60 Query: 61 VSFVQDRATFHDFSQGPTEETKNPLDVAIDGNAFLVVQTPGGERYTREGSLQINNRGQLV 120 +SFVQDRATFHDF+ GPTE+TKNPLDVAIDGNAFLVVQTP GERYTR+G LQIN +GQLV Sbjct: 61 LSFVQDRATFHDFAGGPTEQTKNPLDVAIDGNAFLVVQTPNGERYTRDGGLQINAQGQLV 120 Query: 121 TASGYQVLGTAGPITFQQTDHDVSIAADGNITVLEGTSR-LDSIRGKLRLVSFAQAQRLL 179 TA G+ VLG+ GPI FQQTD +++I+ DG +TV+EG + ++IRG+LRLVSF Q QRL+ Sbjct: 121 TAGGHPVLGSNGPIRFQQTDRNITISDDGTVTVIEGINNATNAIRGRLRLVSFPQVQRLV 180 Query: 180 KEGSNLYAPGEGTQALPDTKAQIRQGFIEKSNVNSVVEMSRMIEITRTYTQIASLLQQQS 239 KEGSNLYA GEG A DT+A+I QGFIE+SNVN+V EMSR++E++R YTQ+A+LLQQQS Sbjct: 181 KEGSNLYAAGEGNFARQDTQARINQGFIERSNVNAVTEMSRLVEVSRAYTQMATLLQQQS 240 Query: 240 DLHKSAIEKLADVP 253 DL +SAIEKLADVP Sbjct: 241 DLQRSAIEKLADVP 254 >ref|YP_568821.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris BisB5] gb|ABE38920.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5] Length = 253 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 173/253 (68%), Positives = 218/253 (86%), Gaps = 1/253 (0%) Query: 1 MQNTLLVGLSKQMVLERQMDVVSNNIANMNTNGYKADRSLFQEYLSSNAHEDNFASSDRR 60 MQNTLLVGLS+Q+VLERQMDVV+NN+AN+NTNG+KA+RS+FQE+L++ AHEDNF + DRR Sbjct: 1 MQNTLLVGLSRQVVLERQMDVVANNLANINTNGFKAERSVFQEFLNTGAHEDNFQAQDRR 60 Query: 61 VSFVQDRATFHDFSQGPTEETKNPLDVAIDGNAFLVVQTPGGERYTREGSLQINNRGQLV 120 VSFVQDRA +HDF+ GP EETKNPLDVAIDG+AFLVVQTP GERYTR+G L IN +GQLV Sbjct: 61 VSFVQDRAAYHDFASGPMEETKNPLDVAIDGSAFLVVQTPQGERYTRDGKLSINPQGQLV 120 Query: 121 TASGYQVLGTAGPITFQQTDHDVSIAADGNITVLEGTSRLDSIRGKLRLVSFAQAQRLLK 180 ASGY VLG +GPI FQ TD ++I++DGN++VLEG + +DS+RGKLR+VSFA+ Q L K Sbjct: 121 NASGYPVLGNSGPIVFQPTDKSINISSDGNVSVLEGVATIDSLRGKLRMVSFARPQSLEK 180 Query: 181 EGSNLYAPGEGTQALPDTKAQIRQGFIEKSNVNSVVEMSRMIEITRTYTQIASLLQQQSD 240 +G NL+A + PD KA +RQG++EKSNVNSV+EM+RMIE+TR+Y +++LLQQ+SD Sbjct: 181 QGGNLFA-ATSDRGAPDPKAIVRQGYVEKSNVNSVLEMTRMIEVTRSYQSVSALLQQESD 239 Query: 241 LHKSAIEKLADVP 253 L K+AIE+LADVP Sbjct: 240 LQKAAIERLADVP 252 >ref|ZP_01046038.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A] gb|EAQ36122.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A] Length = 255 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/254 (72%), Positives = 221/254 (87%), Gaps = 1/254 (0%) Query: 1 MQNTLLVGLSKQMVLERQMDVVSNNIANMNTNGYKADRSLFQEYLSSNAHEDNFASSDRR 60 M+N LL+GLS+QM+LERQ+DVV+NN+AN+NTNGYKADRSLF+EYL AHEDNF DRR Sbjct: 1 MENALLIGLSRQMMLERQIDVVANNVANVNTNGYKADRSLFEEYLMPGAHEDNFVGRDRR 60 Query: 61 VSFVQDRATFHDFSQGPTEETKNPLDVAIDGNAFLVVQTPGGERYTREGSLQINNRGQLV 120 +SFVQDRATFHDF+ GPTE+TKNPLDVAIDG AFLVVQTP GERYTR+G LQIN +GQLV Sbjct: 61 LSFVQDRATFHDFAGGPTEQTKNPLDVAIDGEAFLVVQTPNGERYTRDGGLQINAQGQLV 120 Query: 121 TASGYQVLGTAGPITFQQTDHDVSIAADGNITVLEG-TSRLDSIRGKLRLVSFAQAQRLL 179 TASGY VLG+ GPI FQQTD D++I+ADG +TV+EG + +SIRG LRLVSF Q Q+L+ Sbjct: 121 TASGYPVLGSNGPIRFQQTDRDITISADGTVTVIEGLNNSTNSIRGTLRLVSFRQPQKLI 180 Query: 180 KEGSNLYAPGEGTQALPDTKAQIRQGFIEKSNVNSVVEMSRMIEITRTYTQIASLLQQQS 239 KEGSNLYA GE A PDTK+QI QGFIE+SNV++V EMSRM++++R YTQ+A+LLQQQS Sbjct: 181 KEGSNLYAAGESNFAQPDTKSQIHQGFIERSNVSAVTEMSRMVQVSRAYTQMATLLQQQS 240 Query: 240 DLHKSAIEKLADVP 253 DL ++AIEKLADVP Sbjct: 241 DLQRTAIEKLADVP 254