BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0182.0109.p (440 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203834.1| cytochrome o ubiquinol oxidase subunit I [Br... 820 0.0 ref|YP_483863.1| cytochrome-c oxidase [Rhodopseudomonas palustri... 818 0.0 ref|YP_001238127.1| cytochrome o ubiquinol oxidase subunit I [Br... 812 0.0 ref|NP_766790.1| cytochrome O ubiquinol oxidase subunit I [Brady... 811 0.0 ref|YP_567735.1| cytochrome-c oxidase [Rhodopseudomonas palustri... 793 0.0 >ref|YP_001203834.1| cytochrome o ubiquinol oxidase subunit I [Bradyrhizobium sp. ORS 278] emb|CAL75597.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain A) [Bradyrhizobium sp. ORS 278] Length = 669 Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/440 (91%), Positives = 420/440 (95%) Query: 1 MTMMKMPVFTWTSLCTNVLIVASFPVLTXVLALLSLDRYVGTNFFTNDFGGNPMMYVNLI 60 MTMMKMPVFTWTSLCTNVLIVASFPVLT VLALLSLDRYVGTNFFTNDFGG+PMMYVNLI Sbjct: 230 MTMMKMPVFTWTSLCTNVLIVASFPVLTAVLALLSLDRYVGTNFFTNDFGGDPMMYVNLI 289 Query: 61 WIWGHPEVYILVLPAFGIFSEVTATFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 120 WIWGHPEVYIL+LPAFGIFSEVT+TFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG Sbjct: 290 WIWGHPEVYILILPAFGIFSEVTSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 349 Query: 121 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGV 180 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGV Sbjct: 350 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGV 409 Query: 181 LLAVPPADFVLHNSLFLIAHFHNVIIGGVLFGLFAGINYWFPKAFGFRLDPFWGKLSFWF 240 LLAVPPADFVLHNSLFL+AHFHNVIIGGVLFGLFAGI YWFPKAFGF+LDPFWGK+SFWF Sbjct: 410 LLAVPPADFVLHNSLFLVAHFHNVIIGGVLFGLFAGIAYWFPKAFGFKLDPFWGKMSFWF 469 Query: 241 WVSGFYFAFMPLYVLGLMGVTRRLRVFDDPSLQIWFIIAGFGAFLILLGIVAMLVQFAVS 300 W GFYFAFMPLYVLGLMGVTRRLR FDDPSLQIWFIIAG GAFLILLGI + L+Q AVS Sbjct: 470 WTVGFYFAFMPLYVLGLMGVTRRLRTFDDPSLQIWFIIAGIGAFLILLGIASFLIQIAVS 529 Query: 301 ILRREQLKDTTGDPWNARTLEWATSSPPPDYNFAFTPVVYDNDAWWDMKRRGYRRPLTGF 360 +LRREQL DTTGDPW+ARTLEWATSSPPP YNFAFTPV++DNDAWWDMKRRGY RPLTGF Sbjct: 530 VLRREQLADTTGDPWDARTLEWATSSPPPAYNFAFTPVIHDNDAWWDMKRRGYVRPLTGF 589 Query: 361 KPIHMPSNTGTGIILAGLATVMGFGLIWYIWWLAAVSFVALLAVAIGHTFNYHRDFHIPA 420 K IHMPSNTGTG+ILAGL+T M FGLIWY+WW+AA SFVALLAVAIGHTFNYHR FHIPA Sbjct: 590 KAIHMPSNTGTGVILAGLSTTMAFGLIWYMWWMAAGSFVALLAVAIGHTFNYHRSFHIPA 649 Query: 421 DEVVRTEDARTRVLAAGART 440 DEVV TE ART +LAAGA++ Sbjct: 650 DEVVGTERARTELLAAGAKS 669 >ref|YP_483863.1| cytochrome-c oxidase [Rhodopseudomonas palustris HaA2] gb|ABD04952.1| Cytochrome-c oxidase [Rhodopseudomonas palustris HaA2] Length = 669 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/439 (89%), Positives = 422/439 (96%) Query: 1 MTMMKMPVFTWTSLCTNVLIVASFPVLTXVLALLSLDRYVGTNFFTNDFGGNPMMYVNLI 60 MTMM+MP+FTWTSLCTN+LIVASFPVLT VLALLSLDRYVGTNFFTNDFGGNPMMYVNLI Sbjct: 230 MTMMRMPIFTWTSLCTNILIVASFPVLTVVLALLSLDRYVGTNFFTNDFGGNPMMYVNLI 289 Query: 61 WIWGHPEVYILVLPAFGIFSEVTATFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 120 WIWGHPEVYIL+LPAFGIFSEVT+TFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG Sbjct: 290 WIWGHPEVYILILPAFGIFSEVTSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 349 Query: 121 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGV 180 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIR++LPMMWT+AFMLTFVIGGMTGV Sbjct: 350 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRYDLPMMWTIAFMLTFVIGGMTGV 409 Query: 181 LLAVPPADFVLHNSLFLIAHFHNVIIGGVLFGLFAGINYWFPKAFGFRLDPFWGKLSFWF 240 LLAVPPADFVLHNSLFL+AHFHNVIIGGV+FGLFAGI YWFPKAFGF+LD FWGK+SFW Sbjct: 410 LLAVPPADFVLHNSLFLVAHFHNVIIGGVVFGLFAGIAYWFPKAFGFKLDVFWGKISFWC 469 Query: 241 WVSGFYFAFMPLYVLGLMGVTRRLRVFDDPSLQIWFIIAGFGAFLILLGIVAMLVQFAVS 300 WV GFYFAFMPLYVLGLMGVTRRLRVFDDPSLQIWFIIAGFGAFLIL+GIVA L+Q AVS Sbjct: 470 WVVGFYFAFMPLYVLGLMGVTRRLRVFDDPSLQIWFIIAGFGAFLILIGIVAFLIQIAVS 529 Query: 301 ILRREQLKDTTGDPWNARTLEWATSSPPPDYNFAFTPVVYDNDAWWDMKRRGYRRPLTGF 360 ++RREQL+D TGDPWN RTLEWATSSPPPDYNFAFTP+V D+DAWWDMK+ GY+RPL GF Sbjct: 530 VMRREQLRDVTGDPWNGRTLEWATSSPPPDYNFAFTPMVRDSDAWWDMKKAGYKRPLEGF 589 Query: 361 KPIHMPSNTGTGIILAGLATVMGFGLIWYIWWLAAVSFVALLAVAIGHTFNYHRDFHIPA 420 KPIHMPSNTGTGIIL+GL+ VM FGLIWYIWWLAA+SF+ALLAVAIGHTFNYHRDFHIPA Sbjct: 590 KPIHMPSNTGTGIILSGLSMVMAFGLIWYIWWLAALSFIALLAVAIGHTFNYHRDFHIPA 649 Query: 421 DEVVRTEDARTRVLAAGAR 439 +EVVR ED RTR+LA GA+ Sbjct: 650 EEVVRVEDERTRLLAEGAK 668 >ref|YP_001238127.1| cytochrome o ubiquinol oxidase subunit I [Bradyrhizobium sp. BTAi1] gb|ABQ34221.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Bradyrhizobium sp. BTAi1] Length = 669 Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/440 (90%), Positives = 416/440 (94%) Query: 1 MTMMKMPVFTWTSLCTNVLIVASFPVLTXVLALLSLDRYVGTNFFTNDFGGNPMMYVNLI 60 MTMMKMPVFTWTSLCTNVLIVASFPVLT VLALLSLDRYVGTNFFTNDFGG+PMMYVNLI Sbjct: 230 MTMMKMPVFTWTSLCTNVLIVASFPVLTAVLALLSLDRYVGTNFFTNDFGGDPMMYVNLI 289 Query: 61 WIWGHPEVYILVLPAFGIFSEVTATFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 120 WIWGHPEVYIL+LPAFGIFSEVT+TFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG Sbjct: 290 WIWGHPEVYILILPAFGIFSEVTSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 349 Query: 121 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGV 180 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGV Sbjct: 350 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGV 409 Query: 181 LLAVPPADFVLHNSLFLIAHFHNVIIGGVLFGLFAGINYWFPKAFGFRLDPFWGKLSFWF 240 LLAVPPADFVLHNSLFL+AHFHNVIIGGVLFGLFAGI YWFPKAFGF+LD FWGK+SFWF Sbjct: 410 LLAVPPADFVLHNSLFLVAHFHNVIIGGVLFGLFAGIAYWFPKAFGFKLDVFWGKMSFWF 469 Query: 241 WVSGFYFAFMPLYVLGLMGVTRRLRVFDDPSLQIWFIIAGFGAFLILLGIVAMLVQFAVS 300 W GFYFAFMPLYVLGLMGVTRRLR FDDPSLQIWF+IAG GAFLILLGI + L+Q AVS Sbjct: 470 WTVGFYFAFMPLYVLGLMGVTRRLRTFDDPSLQIWFVIAGIGAFLILLGIASFLIQIAVS 529 Query: 301 ILRREQLKDTTGDPWNARTLEWATSSPPPDYNFAFTPVVYDNDAWWDMKRRGYRRPLTGF 360 ILRREQL D +GDPW+ARTLEWATSSPPP YNFAFTPVV+DNDAWWDMKRRGY RPL GF Sbjct: 530 ILRREQLADVSGDPWDARTLEWATSSPPPAYNFAFTPVVHDNDAWWDMKRRGYVRPLAGF 589 Query: 361 KPIHMPSNTGTGIILAGLATVMGFGLIWYIWWLAAVSFVALLAVAIGHTFNYHRDFHIPA 420 K IHMPSNTGTG+ILAGL+T M FGLIWY+WW+AA SFVALLAVAIGHTFNYHR FHIPA Sbjct: 590 KAIHMPSNTGTGVILAGLSTTMAFGLIWYMWWMAAGSFVALLAVAIGHTFNYHRSFHIPA 649 Query: 421 DEVVRTEDARTRVLAAGART 440 DEVV E ART +LAAGA++ Sbjct: 650 DEVVSVERARTELLAAGAKS 669 >ref|NP_766790.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium japonicum USDA 110] dbj|BAC45415.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium japonicum USDA 110] Length = 665 Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/439 (89%), Positives = 422/439 (96%), Gaps = 1/439 (0%) Query: 1 MTMMKMPVFTWTSLCTNVLIVASFPVLTXVLALLSLDRYVGTNFFTNDFGGNPMMYVNLI 60 MTMMKMPVFTWTSLCTN+LIVASFPVLT VLALLSLDRYVGTNFFTNDFGG+PMMYVNLI Sbjct: 228 MTMMKMPVFTWTSLCTNILIVASFPVLTVVLALLSLDRYVGTNFFTNDFGGSPMMYVNLI 287 Query: 61 WIWGHPEVYILVLPAFGIFSEVTATFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 120 WIWGHPEVYILVLPAFGIFSEVT+TFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG Sbjct: 288 WIWGHPEVYILVLPAFGIFSEVTSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 347 Query: 121 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGV 180 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIR+ELPMMWT+AFMLTFV+GGMTGV Sbjct: 348 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRYELPMMWTIAFMLTFVLGGMTGV 407 Query: 181 LLAVPPADFVLHNSLFLIAHFHNVIIGGVLFGLFAGINYWFPKAFGFRLDPFWGKLSFWF 240 LLAVPPADFVLHNSLFLIAHFHNVIIGGV+FG FAGINYWFPKAFGF+LD FWGKLSFWF Sbjct: 408 LLAVPPADFVLHNSLFLIAHFHNVIIGGVVFGAFAGINYWFPKAFGFKLDVFWGKLSFWF 467 Query: 241 WVSGFYFAFMPLYVLGLMGVTRRLRVFDDPSLQIWFIIAGFGAFLILLGIVAMLVQFAVS 300 WV GFY AFMPLYVLGLMGVTRRLRVFDDPSLQIWF+IA GA L+ LGI++ML+QFAVS Sbjct: 468 WVVGFYLAFMPLYVLGLMGVTRRLRVFDDPSLQIWFVIAAIGAGLVFLGILSMLMQFAVS 527 Query: 301 ILRREQLKDTTGDPWNARTLEWATSSPPPDYNFAFTPVVYDNDAWWDMKRRGYRRPLTGF 360 L+REQLKD +GDPW+ARTLEWATSSPPPDYNFAFTPVV+DNDAWWDMK+RGY+RPL GF Sbjct: 528 FLKREQLKDVSGDPWDARTLEWATSSPPPDYNFAFTPVVHDNDAWWDMKKRGYQRPLIGF 587 Query: 361 KPIHMPSNTGTGIILAGLATVMGFGLIWYIWWLAAVSFVALLAVAIGHTFNYHRDFHIPA 420 KPIHMPS+TGTGIILAGLAT MGFGLIWYIWWLAA SF+A+LAV IGHTFNYHRDF IPA Sbjct: 588 KPIHMPSSTGTGIILAGLATAMGFGLIWYIWWLAAASFIAMLAVGIGHTFNYHRDFDIPA 647 Query: 421 DEVVRTEDARTRVLAAGAR 439 D+V+RTEDART++L AGA+ Sbjct: 648 DDVIRTEDARTKLL-AGAK 665 >ref|YP_567735.1| cytochrome-c oxidase [Rhodopseudomonas palustris BisB5] gb|ABE37834.1| Cytochrome-c oxidase [Rhodopseudomonas palustris BisB5] Length = 669 Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/439 (89%), Positives = 417/439 (94%) Query: 1 MTMMKMPVFTWTSLCTNVLIVASFPVLTXVLALLSLDRYVGTNFFTNDFGGNPMMYVNLI 60 MTMM+MP+FTWTSLCTN+LIVASFPVLT VLALL+LDRYVGTNFFTNDFGGNPMMYVNLI Sbjct: 230 MTMMRMPIFTWTSLCTNILIVASFPVLTAVLALLTLDRYVGTNFFTNDFGGNPMMYVNLI 289 Query: 61 WIWGHPEVYILVLPAFGIFSEVTATFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 120 WIWGHPEVYIL+LPAFGIFSEV ATFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG Sbjct: 290 WIWGHPEVYILILPAFGIFSEVAATFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMG 349 Query: 121 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGV 180 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIR++LPMMWTVAFMLTFVIGGMTGV Sbjct: 350 SGASVNSFFGITTMIISIPTGAKMFNWLFTMYRGRIRYDLPMMWTVAFMLTFVIGGMTGV 409 Query: 181 LLAVPPADFVLHNSLFLIAHFHNVIIGGVLFGLFAGINYWFPKAFGFRLDPFWGKLSFWF 240 LLAVPPADFVLHNSLFL+AHFHNVIIGGV+FG FAGI YWFPKAFGF+LD FWGK+SFW Sbjct: 410 LLAVPPADFVLHNSLFLVAHFHNVIIGGVVFGAFAGIAYWFPKAFGFKLDVFWGKVSFWC 469 Query: 241 WVSGFYFAFMPLYVLGLMGVTRRLRVFDDPSLQIWFIIAGFGAFLILLGIVAMLVQFAVS 300 WV GFYFAFMPLYVLGLMGVTRRLRVFDDPS QIWF IA FGAFL+L+GIVA L+Q AVS Sbjct: 470 WVVGFYFAFMPLYVLGLMGVTRRLRVFDDPSYQIWFAIAAFGAFLVLIGIVAFLIQIAVS 529 Query: 301 ILRREQLKDTTGDPWNARTLEWATSSPPPDYNFAFTPVVYDNDAWWDMKRRGYRRPLTGF 360 ++RREQL+D TGDPWN RTLEWATSSPPPDYNFAFTP+V D DAWWDMK+ GY RPL GF Sbjct: 530 VMRREQLRDVTGDPWNGRTLEWATSSPPPDYNFAFTPMVRDADAWWDMKKHGYSRPLGGF 589 Query: 361 KPIHMPSNTGTGIILAGLATVMGFGLIWYIWWLAAVSFVALLAVAIGHTFNYHRDFHIPA 420 KPIHMPSNTGTG+ILAGL+TVM FGLIWYIWWLAA+SF+ALLAVAIGHTFNYHRD+HIPA Sbjct: 590 KPIHMPSNTGTGVILAGLSTVMSFGLIWYIWWLAALSFIALLAVAIGHTFNYHRDYHIPA 649 Query: 421 DEVVRTEDARTRVLAAGAR 439 DEVVR ED RTR+LAAGAR Sbjct: 650 DEVVRVEDERTRLLAAGAR 668