BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0182.0108.p (209 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_567736.1| cytochrome c oxidase subunit III [Rhodopseudomo... 378 e-103 ref|YP_483862.1| cytochrome c oxidase, subunit III [Rhodopseudom... 367 e-100 ref|NP_107275.1| cytochrome o ubiquinol oxidase subunit III [Mes... 363 7e-99 ref|YP_001203835.1| cytochrome o ubiquinol oxidase subunit III [... 361 4e-98 ref|YP_001238128.1| cytochrome o ubiquinol oxidase subunit III [... 361 5e-98 >ref|YP_567736.1| cytochrome c oxidase subunit III [Rhodopseudomonas palustris BisB5] gb|ABE37835.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris BisB5] Length = 209 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/209 (87%), Positives = 194/209 (92%) Query: 1 MSVAIITTQDSEPVFHVIDEHDHPEGASTMLGFWIYLMSDCLIFAMLFATYGVLGGNYAA 60 MSVA+ T Q +EPVFHV+DEH HPEGASTMLGFW+YLMSDCLIFA+LFATYGVLG NYAA Sbjct: 1 MSVAVATPQTAEPVFHVVDEHAHPEGASTMLGFWLYLMSDCLIFAILFATYGVLGANYAA 60 Query: 61 GPSPKDLFDLKLVALNTTMLLLSSITYGFAMLTMEKSRIRATQLWLAITGLFGLAFLGIE 120 GP+PKDLFDLKLVA+NT MLLLSSITYGFAML M ++R+ ATQLWL ITGLFGLAFLGIE Sbjct: 61 GPAPKDLFDLKLVAVNTAMLLLSSITYGFAMLEMARARVGATQLWLGITGLFGLAFLGIE 120 Query: 121 LTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLVWLVTLMVQTARFGLTEANRRR 180 L EFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFG+VWLVTLMVQ AR GL EANRRR Sbjct: 121 LYEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTLMVQVARTGLIEANRRR 180 Query: 181 LMCLSMFWHFLDVVWIGVFTFVYLLGMLR 209 LMCLSMFWHFLDVVWIGVFTFVYLLG LR Sbjct: 181 LMCLSMFWHFLDVVWIGVFTFVYLLGTLR 209 >ref|YP_483862.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris HaA2] gb|ABD04951.1| Cytochrome c oxidase, subunit III [Rhodopseudomonas palustris HaA2] Length = 209 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/209 (85%), Positives = 189/209 (90%) Query: 1 MSVAIITTQDSEPVFHVIDEHDHPEGASTMLGFWIYLMSDCLIFAMLFATYGVLGGNYAA 60 MSV Q +EPVFHV+DEH HPEGASTMLGFWIYLMSDCLIFA+LFATYGVLG NYAA Sbjct: 1 MSVVAAAPQAAEPVFHVVDEHAHPEGASTMLGFWIYLMSDCLIFAILFATYGVLGANYAA 60 Query: 61 GPSPKDLFDLKLVALNTTMLLLSSITYGFAMLTMEKSRIRATQLWLAITGLFGLAFLGIE 120 GP+PKDLFDLKLVA+NT MLL+SSITYGFAMLTMEK ++ AT WL +TGLFGLAFLGIE Sbjct: 61 GPAPKDLFDLKLVAVNTAMLLMSSITYGFAMLTMEKRQVGATLAWLGVTGLFGLAFLGIE 120 Query: 121 LTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLVWLVTLMVQTARFGLTEANRRR 180 L EF HMIHEGATPQRSAFLSSFFTLVGTHGLHVTFG++WLVTLMVQ AR GL EANRRR Sbjct: 121 LYEFHHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIIWLVTLMVQVARAGLIEANRRR 180 Query: 181 LMCLSMFWHFLDVVWIGVFTFVYLLGMLR 209 LMCLSMFWHFLDVVWIGVFTFVYLLG LR Sbjct: 181 LMCLSMFWHFLDVVWIGVFTFVYLLGTLR 209 >ref|NP_107275.1| cytochrome o ubiquinol oxidase subunit III [Mesorhizobium loti MAFF303099] dbj|BAB53061.1| cytochrome o ubiquinol oxidase subunit III [Mesorhizobium loti MAFF303099] Length = 208 Score = 363 bits (933), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 175/206 (84%), Positives = 189/206 (91%) Query: 4 AIITTQDSEPVFHVIDEHDHPEGASTMLGFWIYLMSDCLIFAMLFATYGVLGGNYAAGPS 63 +I TT +EPVFH+ +EH H EG+STMLGFW+YLMSDCLIFAMLFA YGVLG NYAAGP+ Sbjct: 3 SIATTAGTEPVFHLEEEHVHAEGSSTMLGFWLYLMSDCLIFAMLFAAYGVLGANYAAGPA 62 Query: 64 PKDLFDLKLVALNTTMLLLSSITYGFAMLTMEKSRIRATQLWLAITGLFGLAFLGIELTE 123 PKDLFDL LVA+NTTMLLLSSITYGFAMLTM+K R+ ATQ WLA+TGLFGLAFL IEL E Sbjct: 63 PKDLFDLDLVAVNTTMLLLSSITYGFAMLTMDKGRVAATQAWLAVTGLFGLAFLSIELYE 122 Query: 124 FAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLVWLVTLMVQTARFGLTEANRRRLMC 183 FAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFG+VWLVTLM Q ARFGL EANRRR+MC Sbjct: 123 FAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTLMTQVARFGLIEANRRRVMC 182 Query: 184 LSMFWHFLDVVWIGVFTFVYLLGMLR 209 LSMFWHFLDVVWIGVFTFVYL+GMLR Sbjct: 183 LSMFWHFLDVVWIGVFTFVYLMGMLR 208 >ref|YP_001203835.1| cytochrome o ubiquinol oxidase subunit III [Bradyrhizobium sp. ORS 278] emb|CAL75598.1| Cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) [Bradyrhizobium sp. ORS 278] Length = 209 Score = 361 bits (926), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 172/209 (82%), Positives = 191/209 (91%) Query: 1 MSVAIITTQDSEPVFHVIDEHDHPEGASTMLGFWIYLMSDCLIFAMLFATYGVLGGNYAA 60 M++A T + EPVF+V+DEHDHPEG+ST LGFWIYLMSDCLIFA+LFA YGVLG YAA Sbjct: 1 MTIAAGTMKAGEPVFYVVDEHDHPEGSSTQLGFWIYLMSDCLIFAILFAVYGVLGTKYAA 60 Query: 61 GPSPKDLFDLKLVALNTTMLLLSSITYGFAMLTMEKSRIRATQLWLAITGLFGLAFLGIE 120 GP+PKDLFDL LVALNT+ LLLSS+TYGFAML+M+++R+ A Q WL +TGLFGLAFLGIE Sbjct: 61 GPAPKDLFDLSLVALNTSFLLLSSLTYGFAMLSMQQNRVGAMQGWLVVTGLFGLAFLGIE 120 Query: 121 LTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLVWLVTLMVQTARFGLTEANRRR 180 LTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLVWLVTLMVQ RFGL EANRRR Sbjct: 121 LTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLVWLVTLMVQVKRFGLIEANRRR 180 Query: 181 LMCLSMFWHFLDVVWIGVFTFVYLLGMLR 209 L+CLSMFWHFLDV+WIGVFTFVYL+GMLR Sbjct: 181 LVCLSMFWHFLDVIWIGVFTFVYLMGMLR 209 >ref|YP_001238128.1| cytochrome o ubiquinol oxidase subunit III [Bradyrhizobium sp. BTAi1] gb|ABQ34222.1| cytochrome bo3 quinol oxidase subunit 3 [Bradyrhizobium sp. BTAi1] Length = 209 Score = 361 bits (926), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 170/209 (81%), Positives = 193/209 (92%) Query: 1 MSVAIITTQDSEPVFHVIDEHDHPEGASTMLGFWIYLMSDCLIFAMLFATYGVLGGNYAA 60 M+VA+ + + EPVF+V+DEH+HPEG+STMLGFWIYLMSDCLIFA+LFA YGVLG YAA Sbjct: 1 MTVAMGSMKAGEPVFYVVDEHEHPEGSSTMLGFWIYLMSDCLIFAILFAVYGVLGAKYAA 60 Query: 61 GPSPKDLFDLKLVALNTTMLLLSSITYGFAMLTMEKSRIRATQLWLAITGLFGLAFLGIE 120 GP+PKDLFDL LVA+NT+ LLLSS+TYGFAML+M+++R+ A Q WLAITGLFGLAFLGIE Sbjct: 61 GPAPKDLFDLSLVAVNTSFLLLSSLTYGFAMLSMQQNRVGAMQAWLAITGLFGLAFLGIE 120 Query: 121 LTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLVWLVTLMVQTARFGLTEANRRR 180 LTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGL+WLVTLMVQ +GL EANRRR Sbjct: 121 LTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLIWLVTLMVQVKTYGLIEANRRR 180 Query: 181 LMCLSMFWHFLDVVWIGVFTFVYLLGMLR 209 L+CLSMFWHFLDV+WIGVFTFVYL+GMLR Sbjct: 181 LVCLSMFWHFLDVIWIGVFTFVYLMGMLR 209