BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0182.0105.p (342 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768669.1| 6-O-carbamoyl transferase [Bradyrhizobium japon... 472 e-131 gb|AAC80569.1| NodU [Bradyrhizobium sp. SNU001] 465 e-129 sp|Q53515.1|NODU_RHITR RecName: Full=Nodulation protein U >gi|99... 423 e-116 ref|NP_443985.1| nodulation protein NodU [Sinorhizobium fredii N... 420 e-115 emb|CAH04371.1| NodU carbamoyl transferase [Sinorhizobium sp. BR... 412 e-113 >ref|NP_768669.1| 6-O-carbamoyl transferase [Bradyrhizobium japonicum USDA 110] sp|P26027.1|NODU_BRAJA RecName: Full=Nodulation protein U gb|AAG61000.1|AF322013_119 NodU [Bradyrhizobium japonicum] gb|AAA26228.1| nodU gene product [Bradyrhizobium japonicum] dbj|BAC47294.1| 6-O-carbamoyl transferase [Bradyrhizobium japonicum USDA 110] Length = 569 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 226/258 (87%), Positives = 239/258 (92%) Query: 84 RYRADINNAEASLAAVHDFFEASALRLTAKRAEDVLASFHVFLERLLVREIAMVLLRHSS 143 RYR +INNAEASLA +HDFFE+SALRL AKRAEDVLASFHVFLERLLV+EIAMVLLRHSS Sbjct: 239 RYRENINNAEASLAVIHDFFESSALRLKAKRAEDVLASFHVFLERLLVKEIAMVLLRHSS 298 Query: 144 LPGARNLCVAGGCGLNIKWNSALRATGLFDEVWVPPFPNDSGSAIGAACSAMAAQKGFGP 203 LPGARNLC+AGGCGLNIKWNSALRATGLFD+VWVPPFPNDSGSAIGAAC AMAAQ GF P Sbjct: 299 LPGARNLCIAGGCGLNIKWNSALRATGLFDDVWVPPFPNDSGSAIGAACGAMAAQDGFEP 358 Query: 204 LEWSVYSGPALQASESPSEWEPAPCTLRELAAILADNKPVIFLSGRAELGPRALGGRSIL 263 LEWSVYSGPALQ SE P +WE APC+L ELA+ILADNKPVIFLSG A LGPRALGGRSIL Sbjct: 359 LEWSVYSGPALQESEVPPDWEAAPCSLPELASILADNKPVIFLSGCAGLGPRALGGRSIL 418 Query: 264 AAATLPAMKDHLNDIKRREHFRPVAPICLEDRAPEIFSPGTPDPYMLFDHQTREEWRDKV 323 AA T P MKDHLNDIKRREHFRPV PICLEDRAPEIFSPGTPDPYMLFDHQTR WRDK+ Sbjct: 419 AAPTSPEMKDHLNDIKRREHFRPVVPICLEDRAPEIFSPGTPDPYMLFDHQTRANWRDKI 478 Query: 324 PAIVHLDGSARLQTVARN 341 PA+VHLDGSARLQT++RN Sbjct: 479 PAVVHLDGSARLQTISRN 496 >gb|AAC80569.1| NodU [Bradyrhizobium sp. SNU001] Length = 569 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 223/258 (86%), Positives = 236/258 (91%) Query: 84 RYRADINNAEASLAAVHDFFEASALRLTAKRAEDVLASFHVFLERLLVREIAMVLLRHSS 143 RYR +INNAE SLA +HDFFE+SALRL AKRAEDVLASFHVFLERLLV+EIAMVLLRHSS Sbjct: 239 RYRENINNAERSLAVIHDFFESSALRLKAKRAEDVLASFHVFLERLLVKEIAMVLLRHSS 298 Query: 144 LPGARNLCVAGGCGLNIKWNSALRATGLFDEVWVPPFPNDSGSAIGAACSAMAAQKGFGP 203 LPGARNLC+AGGCGLNIKWNSALR GLFD+VWVPPFPNDSGSAIGAAC AMAAQ GF P Sbjct: 299 LPGARNLCIAGGCGLNIKWNSALRDAGLFDDVWVPPFPNDSGSAIGAACGAMAAQDGFEP 358 Query: 204 LEWSVYSGPALQASESPSEWEPAPCTLRELAAILADNKPVIFLSGRAELGPRALGGRSIL 263 LEWSVYSGPALQ SE P +WE APC+L ELA+ILADNKPVIFLSG A LGPRALGGRSIL Sbjct: 359 LEWSVYSGPALQESEVPPDWEAAPCSLPELASILADNKPVIFLSGCAGLGPRALGGRSIL 418 Query: 264 AAATLPAMKDHLNDIKRREHFRPVAPICLEDRAPEIFSPGTPDPYMLFDHQTREEWRDKV 323 AA T P MKDHLNDIKRREHFRPV PICLEDRAPEIFSPGTPDPYMLFDHQTR WRDK+ Sbjct: 419 AAPTSPEMKDHLNDIKRREHFRPVVPICLEDRAPEIFSPGTPDPYMLFDHQTRANWRDKL 478 Query: 324 PAIVHLDGSARLQTVARN 341 PA+VHLDGSARLQT++RN Sbjct: 479 PAVVHLDGSARLQTISRN 496 >sp|Q53515.1|NODU_RHITR RecName: Full=Nodulation protein U gb|AAB34511.1| NodU [Rhizobium tropici] Length = 575 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 201/258 (77%), Positives = 229/258 (88%), Gaps = 1/258 (0%) Query: 84 RYRADINNAEASLAAVHDFFEASALRLTAKRAEDVLASFHVFLERLLVREIAMVLLRHSS 143 RYRA+IN+AE+SL AVHDFF+AS +RL K E+VLASFH FLE LLVRE+A+ + RHS Sbjct: 239 RYRANINDAESSLIAVHDFFDASVVRLEDKAPENVLASFHSFLELLLVREMALAMQRHS- 297 Query: 144 LPGARNLCVAGGCGLNIKWNSALRATGLFDEVWVPPFPNDSGSAIGAACSAMAAQKGFGP 203 LPG RNLC+AGGCGLNIKWNSALR TGLFD VWVPPFPNDSGSAIGAACSAMAA +GF P Sbjct: 298 LPGPRNLCIAGGCGLNIKWNSALRETGLFDAVWVPPFPNDSGSAIGAACSAMAAHEGFVP 357 Query: 204 LEWSVYSGPALQASESPSEWEPAPCTLRELAAILADNKPVIFLSGRAELGPRALGGRSIL 263 LEWSVYSGPAL+ ++P WE APC++ ELA ILA NKPV+FL+GRAELGPRALGGRSIL Sbjct: 358 LEWSVYSGPALKNGDAPPGWEAAPCSILELATILASNKPVVFLAGRAELGPRALGGRSIL 417 Query: 264 AAATLPAMKDHLNDIKRREHFRPVAPICLEDRAPEIFSPGTPDPYMLFDHQTREEWRDKV 323 AAAT P MKD+LN++K REHFRPVAPICLED AP+IFSPGTPDPYMLFDHQTR EW+DK+ Sbjct: 418 AAATSPQMKDYLNEVKFREHFRPVAPICLEDLAPDIFSPGTPDPYMLFDHQTRPEWKDKI 477 Query: 324 PAIVHLDGSARLQTVARN 341 PA+VHLDGSARLQT++R+ Sbjct: 478 PAVVHLDGSARLQTISRS 495 >ref|NP_443985.1| nodulation protein NodU [Sinorhizobium fredii NGR234] sp|P31957.2|NODU_RHISN RecName: Full=Nodulation protein U emb|CAA62004.1| nodU [Rhizobium sp.] gb|AAB91782.1| nodulation protein NodU; involved in C-6 carbamoylation of Nodulation factor [Sinorhizobium fredii NGR234] Length = 558 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 199/257 (77%), Positives = 227/257 (88%), Gaps = 1/257 (0%) Query: 85 YRADINNAEASLAAVHDFFEASALRLTAKRAEDVLASFHVFLERLLVREIAMVLLRHSSL 144 +RA+INN+E+SLAAVHDFF ASAL+L A+ EDVLAS H FLERLLV E+A L +H L Sbjct: 240 FRANINNSESSLAAVHDFFAASALQLGAEAPEDVLASSHFFLERLLVDEMANAL-QHHPL 298 Query: 145 PGARNLCVAGGCGLNIKWNSALRATGLFDEVWVPPFPNDSGSAIGAACSAMAAQKGFGPL 204 PGARNLC+AGGCGLNIKWNSALR TGLFD VWVPPFPNDSGSAIGAAC + AQ+GF PL Sbjct: 299 PGARNLCIAGGCGLNIKWNSALRETGLFDSVWVPPFPNDSGSAIGAACCEIVAQQGFVPL 358 Query: 205 EWSVYSGPALQASESPSEWEPAPCTLRELAAILADNKPVIFLSGRAELGPRALGGRSILA 264 +WSVYSGP+LQA + P+ W +PC++ E+AAILA NKPV+FLSGR+ELGPRALGGRSILA Sbjct: 359 DWSVYSGPSLQAGKVPAGWHASPCSISEVAAILASNKPVVFLSGRSELGPRALGGRSILA 418 Query: 265 AATLPAMKDHLNDIKRREHFRPVAPICLEDRAPEIFSPGTPDPYMLFDHQTREEWRDKVP 324 AAT P MKDHLN+IK REHFRPVAPICLEDRAP+IFSPGTPDPYMLFDHQT+ W+DKVP Sbjct: 419 AATSPEMKDHLNEIKFREHFRPVAPICLEDRAPDIFSPGTPDPYMLFDHQTKMPWQDKVP 478 Query: 325 AIVHLDGSARLQTVARN 341 A+VHLDGSARLQT++RN Sbjct: 479 AVVHLDGSARLQTISRN 495 >emb|CAH04371.1| NodU carbamoyl transferase [Sinorhizobium sp. BR816] Length = 569 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 197/258 (76%), Positives = 221/258 (85%), Gaps = 1/258 (0%) Query: 84 RYRADINNAEASLAAVHDFFEASALRLTAKRAEDVLASFHVFLERLLVREIAMVLLRHSS 143 YRA+IN+AE+SLAAVHDFFEAS LRL AK DVLASFH+FLERLLV+E+ L RHS Sbjct: 239 HYRANINDAESSLAAVHDFFEASVLRLEAKAPADVLASFHLFLERLLVQEVTNALRRHS- 297 Query: 144 LPGARNLCVAGGCGLNIKWNSALRATGLFDEVWVPPFPNDSGSAIGAACSAMAAQKGFGP 203 PG +NLC+AGGC LNIKWNSALR TGLFD VWVPPFPNDSGSAIGAAC AM AQ+GF Sbjct: 298 FPGPQNLCIAGGCCLNIKWNSALRETGLFDAVWVPPFPNDSGSAIGAACCAMVAQQGFVS 357 Query: 204 LEWSVYSGPALQASESPSEWEPAPCTLRELAAILADNKPVIFLSGRAELGPRALGGRSIL 263 LEWSVYSGP+LQ P W+ C++ ELA ILA NKPV+FLSGRAELGPR+LGGRSIL Sbjct: 358 LEWSVYSGPSLQIGHVPPGWKATLCSMPELATILAGNKPVVFLSGRAELGPRSLGGRSIL 417 Query: 264 AAATLPAMKDHLNDIKRREHFRPVAPICLEDRAPEIFSPGTPDPYMLFDHQTREEWRDKV 323 AAAT P MKD LN++K REHFRPVAPICLEDRAP+IFSPGTPDPYMLFDHQTR EW+DK+ Sbjct: 418 AAATSPGMKDFLNEVKFREHFRPVAPICLEDRAPDIFSPGTPDPYMLFDHQTRMEWQDKI 477 Query: 324 PAIVHLDGSARLQTVARN 341 PA+VHLDGSARLQT++R+ Sbjct: 478 PAVVHLDGSARLQTISRH 495