BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0182.0101.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768671.1| NodJ protein [Bradyrhizobium japonicum USDA 110... 429 e-118 gb|AAC80571.1| NodJ [Bradyrhizobium sp. SNU001] 412 e-113 ref|YP_002499215.1| NodJ family ABC transporter [Methylobacteriu... 395 e-108 gb|AAY89046.1| NodJ [Sinorhizobium fredii] 387 e-105 ref|NP_443881.1| nodulation protein NodJ [Sinorhizobium fredii N... 386 e-105 >ref|NP_768671.1| NodJ protein [Bradyrhizobium japonicum USDA 110] sp|P26025.1|NODJ_BRAJA RecName: Full=Nodulation protein J gb|AAG61002.1|AF322013_121 NodJ [Bradyrhizobium japonicum] gb|AAA26230.1| nodJ gene product [Bradyrhizobium japonicum] dbj|BAC47296.1| NodJ protein [Bradyrhizobium japonicum USDA 110] prf||1914270B nodulation protein Length = 262 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 224/263 (85%), Positives = 241/263 (91%), Gaps = 1/263 (0%) Query: 1 MGESYAALMPANAYNWIAVWRRNFLAWRKVALASVLGNLADPITNLFGLGFGLGLIVGRV 60 M + YA++MPANAYNW AVWRRN+LAWRKVALAS+LGNLADPITNLFGLGFGLGLIVGRV Sbjct: 1 MDDGYASVMPANAYNWTAVWRRNYLAWRKVALASLLGNLADPITNLFGLGFGLGLIVGRV 60 Query: 61 EGTSYISFLAAGMVATSAMTSATFETMYATFARMDAKRTWEAILSTQLTLGDVVLGELVW 120 EGTSYI+FLAAGMVA SAMTSATFET+YA FARMD KRTWE IL TQLTLGD+VLGELVW Sbjct: 61 EGTSYIAFLAAGMVAISAMTSATFETLYAAFARMDVKRTWEGILFTQLTLGDIVLGELVW 120 Query: 121 AASKSVLAGTAIGIVAATLGYASWASILYAMPTVALTGLVFASLAMVVISLAPSYDYFVF 180 AASKSVLAGTAIGIVAATLGYASW S+L A+PT+ALTGLVFASLAMVVISLAP+YDYFVF Sbjct: 121 AASKSVLAGTAIGIVAATLGYASWTSVLCAIPTIALTGLVFASLAMVVISLAPTYDYFVF 180 Query: 181 YQTLILTPMVFLCGAVFPMSQLPSSFQHIAGLLPLAHSVDLIRPAMLDRAASGGAAFHVG 240 YQ+L+LTPMVFLCGAVFP SQ+P SFQH AGLLPLAHSVDLIRP ML+R A AA HVG Sbjct: 181 YQSLVLTPMVFLCGAVFPTSQMPDSFQHFAGLLPLAHSVDLIRPVMLERGAD-NAALHVG 239 Query: 241 ALCMYAVLPFFVSTVLFRRRLLR 263 ALC+YAVLPFF S LFRRRLLR Sbjct: 240 ALCVYAVLPFFASIALFRRRLLR 262 >gb|AAC80571.1| NodJ [Bradyrhizobium sp. SNU001] Length = 262 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 218/263 (82%), Positives = 235/263 (89%), Gaps = 1/263 (0%) Query: 1 MGESYAALMPANAYNWIAVWRRNFLAWRKVALASVLGNLADPITNLFGLGFGLGLIVGRV 60 M + YA++MPANAYNW AVWRRN+LAWRKVALAS+LGNLADPITNLFGLGFGLGLIVGRV Sbjct: 1 MDDGYASVMPANAYNWTAVWRRNYLAWRKVALASLLGNLADPITNLFGLGFGLGLIVGRV 60 Query: 61 EGTSYISFLAAGMVATSAMTSATFETMYATFARMDAKRTWEAILSTQLTLGDVVLGELVW 120 EGTSYI+FLAAGMVA SAMTSA FET+YA FARMD KRTWE IL TQLTLGD+VLGELVW Sbjct: 61 EGTSYIAFLAAGMVAISAMTSAGFETLYAGFARMDVKRTWEGILFTQLTLGDIVLGELVW 120 Query: 121 AASKSVLAGTAIGIVAATLGYASWASILYAMPTVALTGLVFASLAMVVISLAPSYDYFVF 180 AASKSVLAGTAIGIVAATLGYASW S+L A+PT+ALT LVFASLAMVVISLAP+YDYFVF Sbjct: 121 AASKSVLAGTAIGIVAATLGYASWTSVLCAIPTIALTRLVFASLAMVVISLAPTYDYFVF 180 Query: 181 YQTLILTPMVFLCGAVFPMSQLPSSFQHIAGLLPLAHSVDLIRPAMLDRAASGGAAFHVG 240 YQ+L+LTPMVFLCGAVFP SQ+P SFQH AGL LAHSVDLIRP ML+R A AA HVG Sbjct: 181 YQSLVLTPMVFLCGAVFPTSQMPDSFQHFAGLFALAHSVDLIRPVMLERGAD-NAALHVG 239 Query: 241 ALCMYAVLPFFVSTVLFRRRLLR 263 AL +Y VLPFF S LFRRRLLR Sbjct: 240 ALLLYGVLPFFASIALFRRRLLR 262 >ref|YP_002499215.1| NodJ family ABC transporter [Methylobacterium nodulans ORS 2060] emb|CAN84686.1| NodJ protein [Methylobacterium nodulans ORS 2060] gb|ACL58912.1| ABC-2 type transporter, NodJ family [Methylobacterium nodulans ORS 2060] Length = 263 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 195/263 (74%), Positives = 226/263 (85%), Gaps = 1/263 (0%) Query: 1 MGESYAALMPANAYNWIAVWRRNFLAWRKVALASVLGNLADPITNLFGLGFGLGLIVGRV 60 +GE YAA +P+NA+NW+AVWRRN AW+KVALASVLGNLADP+ LFGLGFG+G+++G+V Sbjct: 2 IGEGYAAALPSNAWNWLAVWRRNCQAWKKVALASVLGNLADPMIYLFGLGFGIGVMLGQV 61 Query: 61 EGTSYISFLAAGMVATSAMTSATFETMYATFARMDAKRTWEAILSTQLTLGDVVLGELVW 120 EGT YI+FLAAGMVATSAMTSATFET+YA FARM A+RTWEAIL TQLTLGD+VLGEL W Sbjct: 62 EGTPYIAFLAAGMVATSAMTSATFETIYAAFARMHAQRTWEAILCTQLTLGDIVLGELAW 121 Query: 121 AASKSVLAGTAIGIVAATLGYASWASILYAMPTVALTGLVFASLAMVVISLAPSYDYFVF 180 AA+++ LAGT I IVAA LGYA+W S LYA+P +ALTGL FASLAMVV +LAPSYDYFVF Sbjct: 122 AATRAFLAGTGITIVAAMLGYAAWPSFLYALPAIALTGLAFASLAMVVTALAPSYDYFVF 181 Query: 181 YQTLILTPMVFLCGAVFPMSQLPSSFQHIAGLLPLAHSVDLIRPAMLDRAASGGAAFHVG 240 YQTL LTPM+FLCGAVFP +QLP +FQHIA +LPLAHSVDL+R AML R A H+G Sbjct: 182 YQTLFLTPMLFLCGAVFPAAQLPIAFQHIATVLPLAHSVDLVRAAMLGRPAD-SVGLHIG 240 Query: 241 ALCMYAVLPFFVSTVLFRRRLLR 263 LC+YAVLPFF+ST L RRLLR Sbjct: 241 ILCVYAVLPFFLSTALLGRRLLR 263 >gb|AAY89046.1| NodJ [Sinorhizobium fredii] Length = 262 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/262 (69%), Positives = 229/262 (87%), Gaps = 1/262 (0%) Query: 1 MGESYAALMPANAYNWIAVWRRNFLAWRKVALASVLGNLADPITNLFGLGFGLGLIVGRV 60 M + YAA++PAN +NWIAVWRRN++AW+K A+AS+LGNLA+P+T+LFGLGFGLG +VGRV Sbjct: 1 MWKRYAAVLPANPWNWIAVWRRNYMAWKKAAIASILGNLAEPVTSLFGLGFGLGAMVGRV 60 Query: 61 EGTSYISFLAAGMVATSAMTSATFETMYATFARMDAKRTWEAILSTQLTLGDVVLGELVW 120 +G Y++FLAAGMVATSAM SATFET++ATFARM AKRTWE+ L TQLTLGD+VLGEL W Sbjct: 61 DGIPYVAFLAAGMVATSAMISATFETIHATFARMHAKRTWESALCTQLTLGDIVLGELAW 120 Query: 121 AASKSVLAGTAIGIVAATLGYASWASILYAMPTVALTGLVFASLAMVVISLAPSYDYFVF 180 AASK++LAGTA+ +VAAT+G+ASW S+L+A+P +ALTG FASLAM+V +LAPSYDYF+F Sbjct: 121 AASKALLAGTAMMLVAATMGFASWPSVLFALPVIALTGFAFASLAMIVTALAPSYDYFIF 180 Query: 181 YQTLILTPMVFLCGAVFPMSQLPSSFQHIAGLLPLAHSVDLIRPAMLDRAASGGAAFHVG 240 YQTL LTPM+FL GAVFP+SQLP FQ ++ LLPL+HS++LIRPAMLDR GG A H+ Sbjct: 181 YQTLFLTPMLFLSGAVFPVSQLPDIFQKLSHLLPLSHSIELIRPAMLDRPG-GGVALHIS 239 Query: 241 ALCMYAVLPFFVSTVLFRRRLL 262 ALC++AV+PFF+S L RRRL+ Sbjct: 240 ALCIFAVMPFFLSVGLLRRRLM 261 >ref|NP_443881.1| nodulation protein NodJ [Sinorhizobium fredii NGR234] sp|P55475.1|NODJ_RHISN RecName: Full=Nodulation protein J gb|AAB91693.1| ABC-transporter permease NodJ; probably involved in secretion of Nodulation factor [Sinorhizobium fredii NGR234] Length = 262 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/262 (69%), Positives = 228/262 (87%), Gaps = 1/262 (0%) Query: 1 MGESYAALMPANAYNWIAVWRRNFLAWRKVALASVLGNLADPITNLFGLGFGLGLIVGRV 60 M + YAA++PAN +NWIAVWRRN++AW+K A+AS+LGNLA+P+T+LFGLGFGLG +VGRV Sbjct: 1 MWKRYAAVLPANPWNWIAVWRRNYMAWKKAAIASILGNLAEPVTSLFGLGFGLGAMVGRV 60 Query: 61 EGTSYISFLAAGMVATSAMTSATFETMYATFARMDAKRTWEAILSTQLTLGDVVLGELVW 120 +G Y++FLAAGMVATSAM SATFET++ATFARM AKRTWE+ L TQLTLGD+VLGEL W Sbjct: 61 DGIPYVAFLAAGMVATSAMISATFETIHATFARMQAKRTWESALCTQLTLGDIVLGELAW 120 Query: 121 AASKSVLAGTAIGIVAATLGYASWASILYAMPTVALTGLVFASLAMVVISLAPSYDYFVF 180 AASK++LAGTA+ +VAAT+G+ASW S+L+A+P +ALTG FASLAM+V +LAP YDYF+F Sbjct: 121 AASKALLAGTAMMLVAATMGFASWPSVLFALPVIALTGFAFASLAMIVTALAPGYDYFIF 180 Query: 181 YQTLILTPMVFLCGAVFPMSQLPSSFQHIAGLLPLAHSVDLIRPAMLDRAASGGAAFHVG 240 YQTL LTPM+FL GAVFP+SQLP FQ ++ LLPLAHS++LIRPAMLDR GG A H+ Sbjct: 181 YQTLFLTPMLFLSGAVFPVSQLPDIFQKLSHLLPLAHSIELIRPAMLDR-PGGGVALHIS 239 Query: 241 ALCMYAVLPFFVSTVLFRRRLL 262 ALC++AV+PFF+S L +RRLL Sbjct: 240 ALCIFAVMPFFLSVGLLQRRLL 261