BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0182.0084.p (449 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773585.1| hypothetical protein bll6945 [Bradyrhizobium ja... 556 e-156 ref|YP_001208879.1| hypothetical protein BRADO7080 [Bradyrhizobi... 519 e-145 ref|YP_001236697.1| hypothetical protein BBta_0509 [Bradyrhizobi... 516 e-144 ref|YP_576384.1| hypothetical protein Nham_1076 [Nitrobacter ham... 403 e-110 ref|YP_319602.1| hypothetical protein Nwi_3000 [Nitrobacter wino... 401 e-109 >ref|NP_773585.1| hypothetical protein bll6945 [Bradyrhizobium japonicum USDA 110] dbj|BAC52210.1| bll6945 [Bradyrhizobium japonicum USDA 110] Length = 440 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 287/432 (66%), Positives = 339/432 (78%), Gaps = 3/432 (0%) Query: 16 LDLRSFKLHSQRDAVLNEVHARPFMQLIPPFKVTHFAFLSQGDAAASDRRAFVTFCRERD 75 LDL F+LH QR AVL EVHARPF +L P V FAFLSQG+ AA++R+ FV FC Sbjct: 5 LDLAGFELHPQRGAVLGEVHARPFTRLTAPLTVLRFAFLSQGEVAAANRQKFVAFCTSHG 64 Query: 76 LPAPQLSAKHHQIDIGPVVLRWEQHAEFAIFTWIANGP--FARQSGDSQSAVHSLMRNLR 133 P KHHQ+ IG + LRWEQH+EF FTWI AR G+ +L+R+L Sbjct: 65 QEPPDEGTKHHQVAIGAIQLRWEQHSEFTTFTWILGNADTSARSFGEIGDGPAALIRSLS 124 Query: 134 QEGQLLVAIKLDVEQHAAPLRRAEQLFDKSSLAMARIKGGASVMASDFRVDENGFTKILV 193 Q GQLLVA+KL VEQ +A L RA+++F++ SLAMA ++ G++V+ASDFR D++GF +IL+ Sbjct: 125 QSGQLLVAVKLGVEQTSAALERAQEVFERGSLAMAAVRSGSAVVASDFRADDHGFVRILI 184 Query: 194 CDLGLTPHNLGALVQRLLEVETYRPLALLGLSAALELGPFVDRIDRRLGEVLEEMQGAEG 253 C+ GL+P LGALVQR+LE+ETYR LALLGL AALEL P VD I RRL EVLEEMQGAEG Sbjct: 185 CNDGLSPGRLGALVQRVLEIETYRTLALLGLPAALELAPSVDHIGRRLVEVLEEMQGAEG 244 Query: 254 LKLNNHLLAELTALAASFERGATGSLFRFGASRAYYELVQSRLSIIEGSEITDYPTWSSF 313 LKLNNHLL ELTALAAS ERGA GSLFRFGASRAYY++VQ+RL +IEG EI YPTWSSF Sbjct: 245 LKLNNHLLTELTALAASLERGAAGSLFRFGASRAYYDIVQARLGVIEGGEIAGYPTWSSF 304 Query: 314 LARRMAPAMRTCETTKDREVTLSVKLARAADLLRTRVDVEIEQQNRDLLHAINERTGQQL 373 LARRMAPAMRTC ++R+ LS+KLARAADLLRTRVDVE+E+QNRDLL ++NERT QL Sbjct: 305 LARRMAPAMRTCAALEERQANLSIKLARAADLLRTRVDVELEEQNRDLLRSMNERTKLQL 364 Query: 374 RLQCTVEGLSVAAIGYYVVSLFGYLAKGAHDVGLHVEPSYLTAACVPVAVGVIWLVSYNA 433 RLQ TVEGLSVAAIGYYVVSLFGYLAKGAHD G+HVEPS TA VPVA+GV W+V++ Sbjct: 365 RLQSTVEGLSVAAIGYYVVSLFGYLAKGAHDGGVHVEPSLATALFVPVAIGVTWIVTHRI 424 Query: 434 RKRHLKHRDGPS 445 R+RHLKH DG + Sbjct: 425 RQRHLKH-DGAT 435 >ref|YP_001208879.1| hypothetical protein BRADO7080 [Bradyrhizobium sp. ORS 278] emb|CAL80664.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 441 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 272/428 (63%), Positives = 325/428 (75%), Gaps = 3/428 (0%) Query: 16 LDLRSFKLHSQRDAVLNEVHARPFMQLIPPFKVTHFAFLSQGDAAASDRRAFVTFCRERD 75 LD+ F H RD+VLNEVHARPF L P V FA +++GD+AA+DR + FC Sbjct: 4 LDMSVFTPHPLRDSVLNEVHARPFTPLTQPVSVIRFAVMAKGDSAAADRDSLAAFCARHG 63 Query: 76 LPAPQLSAKHHQIDIGPVVLRWEQHAEFAIFTWIANGPFARQS---GDSQSAVHSLMRNL 132 P+ KHHQ+ +G LRWEQH+EFA FTWI + P + G + +L+ +L Sbjct: 64 AAPPEPGIKHHQVVVGSARLRWEQHSEFATFTWIWSPPASVPKLAFGAIAPELQALIASL 123 Query: 133 RQEGQLLVAIKLDVEQHAAPLRRAEQLFDKSSLAMARIKGGASVMASDFRVDENGFTKIL 192 + G+LLVA+KL VE P++RAE LFDKSSLA+ +KG +ASDFR+DE+GFT+IL Sbjct: 124 KLSGELLVAVKLGVESVTDPVKRAEALFDKSSLALVAVKGSIGALASDFRLDEDGFTRIL 183 Query: 193 VCDLGLTPHNLGALVQRLLEVETYRPLALLGLSAALELGPFVDRIDRRLGEVLEEMQGAE 252 VC G TP LGALVQR+LE+ETYR LALLGL AALEL P VDRI+RRLGEVLEEMQGAE Sbjct: 184 VCIEGPTPERLGALVQRVLELETYRTLALLGLPAALELAPQVDRIERRLGEVLEEMQGAE 243 Query: 253 GLKLNNHLLAELTALAASFERGATGSLFRFGASRAYYELVQSRLSIIEGSEITDYPTWSS 312 LK+NNHLL ELT LAAS ER ATGSLFRFGASRAY+ELVQ+RL++IEG IT Y +WSS Sbjct: 244 TLKINNHLLDELTELAASLERDATGSLFRFGASRAYWELVQARLTVIEGEPITPYSSWSS 303 Query: 313 FLARRMAPAMRTCETTKDREVTLSVKLARAADLLRTRVDVEIEQQNRDLLHAINERTGQQ 372 FL+RR+APAMRT T + R+ LS KLARAADLLRTRVDVE+E+QNRDLL ++NERT Q Sbjct: 304 FLSRRIAPAMRTLTTLERRQDNLSRKLARAADLLRTRVDVELEEQNRDLLRSMNERTKLQ 363 Query: 373 LRLQCTVEGLSVAAIGYYVVSLFGYLAKGAHDVGLHVEPSYLTAACVPVAVGVIWLVSYN 432 LRLQ TVEGLSVAAIGYYVVSLFGYLAKGAHD GL VEP++ TAA VPVA+ +IW ++ Sbjct: 364 LRLQSTVEGLSVAAIGYYVVSLFGYLAKGAHDAGLPVEPTFATAAFVPVAIALIWFTTHQ 423 Query: 433 ARKRHLKH 440 RKRHL+ Sbjct: 424 IRKRHLRE 431 >ref|YP_001236697.1| hypothetical protein BBta_0509 [Bradyrhizobium sp. BTAi1] gb|ABQ32791.1| hypothetical protein BBta_0509 [Bradyrhizobium sp. BTAi1] Length = 442 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 277/428 (64%), Positives = 332/428 (77%), Gaps = 3/428 (0%) Query: 16 LDLRSFKLHSQRDAVLNEVHARPFMQLIPPFKVTHFAFLSQGDAAASDRRAFVTFCRERD 75 DL +F H+ RD+VLNEVHARPF L P V FAF+++GD+AA+DR + FC + Sbjct: 5 FDLSAFTPHALRDSVLNEVHARPFTPLTQPVLVIRFAFMARGDSAAADRASLAAFCAQHG 64 Query: 76 LPAPQLSAKHHQIDIGPVVLRWEQHAEFAIFTWIANGPFA---RQSGDSQSAVHSLMRNL 132 P P+ KHHQ+D+GPV LR+EQH+EFA TWI P R+ G + +L+ L Sbjct: 65 APPPEPGVKHHQVDLGPVRLRFEQHSEFATLTWIWTPPAGAGPRRFGAIAPELRALIAAL 124 Query: 133 RQEGQLLVAIKLDVEQHAAPLRRAEQLFDKSSLAMARIKGGASVMASDFRVDENGFTKIL 192 Q G+LLVA+KL+VE A P+ RAE++F+K+SLA+ IKG A +ASDFR+DE+GFT+IL Sbjct: 125 PQAGELLVAVKLEVENAADPVARAEEIFNKTSLAIVTIKGSAGAVASDFRLDEDGFTRIL 184 Query: 193 VCDLGLTPHNLGALVQRLLEVETYRPLALLGLSAALELGPFVDRIDRRLGEVLEEMQGAE 252 VC G T LGALVQR LE+ETYR LALLGL AALEL P VDRI+RRLGEVL EMQGAE Sbjct: 185 VCADGPTQERLGALVQRALELETYRTLALLGLPAALELAPQVDRIERRLGEVLVEMQGAE 244 Query: 253 GLKLNNHLLAELTALAASFERGATGSLFRFGASRAYYELVQSRLSIIEGSEITDYPTWSS 312 LK+NNHLL ELT LAAS ERGATGSLFRFGASRAY+ELVQ+RL++IEG IT Y +WSS Sbjct: 245 TLKINNHLLDELTELAASLERGATGSLFRFGASRAYWELVQARLTVIEGEPITPYSSWSS 304 Query: 313 FLARRMAPAMRTCETTKDREVTLSVKLARAADLLRTRVDVEIEQQNRDLLHAINERTGQQ 372 FL+RR+APAMRT T + R+ LS KLARAADLLRTRVDVE+E+QNRDLL ++NERT Q Sbjct: 305 FLSRRIAPAMRTLTTLERRQDNLSRKLARAADLLRTRVDVELEEQNRDLLRSMNERTKLQ 364 Query: 373 LRLQCTVEGLSVAAIGYYVVSLFGYLAKGAHDVGLHVEPSYLTAACVPVAVGVIWLVSYN 432 LRLQ TVEGLSVAAIGYYVVSLFGYLAKGAHD+GL VEP++ TAA VPVA+ +IW ++ Sbjct: 365 LRLQSTVEGLSVAAIGYYVVSLFGYLAKGAHDIGLPVEPTFATAAFVPVAIALIWFTTHQ 424 Query: 433 ARKRHLKH 440 RKRHLK Sbjct: 425 IRKRHLKE 432 >ref|YP_576384.1| hypothetical protein Nham_1076 [Nitrobacter hamburgensis X14] gb|ABE61924.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 464 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 217/422 (51%), Positives = 289/422 (68%), Gaps = 3/422 (0%) Query: 24 HSQRDAVLNEVHARPFMQLIPPFKVTHFAFLSQGDAAASDRRAFVTFCRERDLPAPQLSA 83 H R A+L E+HARPF L P ++ HFAF + G+ A +DR FC R LP P + Sbjct: 44 HPLRTAILGELHARPFTALSVPARILHFAFETAGERAQADRANLAAFCSARGLPVPTFAE 103 Query: 84 KHHQIDIGPVVLRWEQHAEFAIFTW-IANGPFARQSGDSQSAVHSLMRNLRQEGQLLVAI 142 +H+++ +G VLRWEQH+EF +TW + + P + +A+ + M+ + Q G L+VAI Sbjct: 104 RHYRVTLGTTVLRWEQHSEFTTYTWELPSQPNGIPFHPAAAALAAPMQLVPQPGPLIVAI 163 Query: 143 KLDVEQHAAPLRRAEQLFDKSSLAMARIKGGASVMASDFRVDENGFTKILVCDLGLTPHN 202 + V ++ E+LFD++SLA+A GA++ A+DF+ D +GF +IL+ D L P Sbjct: 164 DMHVLADGPAVQPPERLFDRNSLALAENSDGAAIYATDFQPDPSGFVRILIVDRKLNPDR 223 Query: 203 LGALVQRLLEVETYRPLALLGLSAALELGPFVDRIDRRLGEVLEEMQGAEGLKLNNHLLA 262 GAL QR++E+ETYR LALLGL A L P + +++RL EV ++M+ L N HLL Sbjct: 224 AGALAQRVIEIETYRTLALLGLPEAQRLSPSISAVEQRLAEVTDKMRNNGNLADNRHLLD 283 Query: 263 ELTALAASFERGATGSLFRFGASRAYYELVQSRLSIIEGSEITDYPTWSSFLARRMAPAM 322 ELTALAA E GA S+FRFGASRAYYE+VQ RL+ I +++ PTW+SFLARRMAPAM Sbjct: 284 ELTALAAEVEAGAAASVFRFGASRAYYEIVQQRLATIGERKVSGLPTWTSFLARRMAPAM 343 Query: 323 RTCETTKDREVTLSVKLARAADLLRTRVDVEIEQQNRDLLHAINERTGQQLRLQCTVEGL 382 RTC TT+ R+ +LS KL+RAA+LLRTRVDVE+EQQN++LL ++N RT QLRLQ TVEGL Sbjct: 344 RTCVTTEARQESLSFKLSRAANLLRTRVDVELEQQNQELLKSMNARTRMQLRLQTTVEGL 403 Query: 383 SVAAIGYYVVSLFGYLAKGAHDVG-LHVEPSYLTAACVPVAVGVIWLVSYNARKRHLKHR 441 SVAAI YYVVSLFGY+AK H+ G + +EP YLTAA +PVA IW V R +H+ R Sbjct: 404 SVAAITYYVVSLFGYVAKALHESGAVPIEPGYLTAAFIPVAALSIWSVVRRIRHKHIG-R 462 Query: 442 DG 443 DG Sbjct: 463 DG 464 >ref|YP_319602.1| hypothetical protein Nwi_3000 [Nitrobacter winogradskyi Nb-255] gb|ABA06250.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 438 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 217/426 (50%), Positives = 287/426 (67%), Gaps = 11/426 (2%) Query: 24 HSQRDAVLNEVHARPFMQLIPPFKVTHFAFLSQGDAAASDRRAFVTFCRERDLPAPQLSA 83 H R+A+L E+HARPF L P ++ HFAF + G+ +DR FC R LP P S Sbjct: 18 HPLRNAILGELHARPFTALTVPARILHFAFDTAGERGHADRVNLAKFCAARGLPVPTFSE 77 Query: 84 KHHQIDIGPVVLRWEQHAEFAIFTW----IANG-PFARQSGDSQSAVHSLMRNLRQEGQL 138 +H+++ G LRWEQH+EF +TW ANG PF +A+ + M+ + Q G L Sbjct: 78 RHYRVAFGTTALRWEQHSEFTTYTWELPSPANGIPF----HPPAAALATPMQLVPQPGPL 133 Query: 139 LVAIKLDVEQHAAPLRRAEQLFDKSSLAMARIKGGASVMASDFRVDENGFTKILVCDLGL 198 LVAI + V ++ E+LF+++SLA+A GA++ A+DF+ D +GF +ILV D L Sbjct: 134 LVAIDMHVLADGPAVQPPERLFERTSLALAENNDGAAIYATDFQPDPSGFVRILVVDRKL 193 Query: 199 TPHNLGALVQRLLEVETYRPLALLGLSAALELGPFVDRIDRRLGEVLEEMQGAEGLKLNN 258 P GAL QR++E+ETYR LALLGL A L P + +++RL EV ++M+ L N Sbjct: 194 NPDRAGALAQRVIEIETYRTLALLGLPEAQRLAPSISAVEQRLAEVTDKMRNNGNLADNR 253 Query: 259 HLLAELTALAASFERGATGSLFRFGASRAYYELVQSRLSIIEGSEITDYPTWSSFLARRM 318 HLL ELTALAA E GA S+FRFGASRAYYE+VQ RL+ + ++ PTW+SFLARRM Sbjct: 254 HLLDELTALAAEVEAGAAASVFRFGASRAYYEIVQQRLATVGERKVAGLPTWTSFLARRM 313 Query: 319 APAMRTCETTKDREVTLSVKLARAADLLRTRVDVEIEQQNRDLLHAINERTGQQLRLQCT 378 APAMRTC TT+ R+ +LS+KL+R A+LLRTRVDVE+EQQN++LL ++N RT QLRLQ T Sbjct: 314 APAMRTCVTTEARQESLSLKLSRTANLLRTRVDVELEQQNQELLKSMNARTRMQLRLQTT 373 Query: 379 VEGLSVAAIGYYVVSLFGYLAKGAHDVG-LHVEPSYLTAACVPVAVGVIWLVSYNARKRH 437 VEGLSVAAI YYVVSLFGY+AK H+ G L ++P +LTAA +PVA IW + R +H Sbjct: 374 VEGLSVAAITYYVVSLFGYIAKALHESGTLAIKPGHLTAAFIPVAAFTIWSIVRRIRHKH 433 Query: 438 LKHRDG 443 + H DG Sbjct: 434 IGH-DG 438