BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0182.0080.p (509 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768681.1| hypothetical protein blr2041 [Bradyrhizobium ja... 621 e-176 ref|YP_776924.1| hypothetical protein Bamb_5041 [Burkholderia am... 207 5e-51 ref|YP_001519714.1| hypothetical protein AM1_5439 [Acaryochloris... 150 4e-34 ref|ZP_01223215.1| hypothetical protein GB2207_08196 [marine gam... 147 6e-33 ref|YP_528823.1| hypothetical protein Sde_3356 [Saccharophagus d... 144 4e-32 >ref|NP_768681.1| hypothetical protein blr2041 [Bradyrhizobium japonicum USDA 110] gb|AAG61010.1|AF322013_129 ID747 [Bradyrhizobium japonicum] dbj|BAC47306.1| blr2041 [Bradyrhizobium japonicum USDA 110] Length = 407 Score = 621 bits (1601), Expect = e-176, Method: Compositional matrix adjust. Identities = 302/391 (77%), Positives = 343/391 (87%) Query: 117 SQASQVQLDRPSQIVCEYLTEQARNLFGLHPFAAEMSKRQVASLLPEYLAMSQAFPYLQA 176 SQAS+ D+P ++ CEYLTE+ R LFG HPFA++MS QVASLLPEYLAMSQAFPYLQA Sbjct: 3 SQASRFAPDQPPKLSCEYLTERVRALFGPHPFASQMSGDQVASLLPEYLAMSQAFPYLQA 62 Query: 177 GSQKDLIFDAMRRNRDLPRDVELTSVVANFICWDETGGYGRVLRGGKTALPDILATEDFH 236 GSQ+DLIFDAM +NRD+ RD+ELTSVVANFICWDETGG+G +LRGGK ALPDIL TE+FH Sbjct: 63 GSQRDLIFDAMHQNRDIGRDIELTSVVANFICWDETGGHGGILRGGKAALPDILLTENFH 122 Query: 237 SNLLRKDASRLLGRTIQPNYSATTKRYLHSLYAGLSAKDPVVRCAYMVAFELHAAEMIQS 296 SNLLRKDA+RLLGR I+PNYS TK+YLHSLYAGLS+KDP+VRCAYMVAFELHAA+MIQS Sbjct: 123 SNLLRKDAARLLGRAIRPNYSDRTKQYLHSLYAGLSSKDPLVRCAYMVAFELHAADMIQS 182 Query: 297 LWTTLVKTFDAQSDDLEYFRTHVGGVDPAEKYHGEMTTRLIREVVPADGNRRFLDEFDRA 356 LWTTLVKTF A+ DDLEYFR HVGG DPAEKYHGEMT RLI E+V N RFL+EF RA Sbjct: 183 LWTTLVKTFKARPDDLEYFRGHVGGEDPAEKYHGEMTGRLIGELVQPGLNDRFLNEFGRA 242 Query: 357 YRLSLQWCRDLLQTVSIEEDGLAEIEHHGGCHCGAVKFYVRAPRELSAVRCNCSICQMSG 416 YRLS+QWCRDLL T + D +E++HHG CHCGA+KFYV APRELSAVRCNCSICQMSG Sbjct: 243 YRLSVQWCRDLLGTAARTGDDHSEMQHHGRCHCGAIKFYVNAPRELSAVRCNCSICQMSG 302 Query: 417 FLHLLVSGDKLRIECGEEFLNTYQFNKNIARHTFCRICGVKPFYRPRSNPTGFSVNIRCL 476 F+HLLV GDKLRIECGEEFL TYQFNKNIARHTFCR+CGVKPFYRPRSNP+G+SVNIRCL Sbjct: 303 FVHLLVPGDKLRIECGEEFLTTYQFNKNIARHTFCRLCGVKPFYRPRSNPSGYSVNIRCL 362 Query: 477 DKRTIENITIEEFDGEHWEEAFRPTREDWEA 507 D++TIE++ I EFDG HWE+AF ++D E+ Sbjct: 363 DRKTIEHLRISEFDGAHWEQAFLSMQQDPES 393 >ref|YP_776924.1| hypothetical protein Bamb_5041 [Burkholderia ambifaria AMMD] gb|ABI90590.1| conserved hypothetical protein [Burkholderia ambifaria AMMD] Length = 239 Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 138/224 (61%), Gaps = 1/224 (0%) Query: 146 HPFAAEMSKRQVASLLPEYLAMSQAFPYLQAGSQKDLIFDAMRRNRDLPRDVELTSVVAN 205 HPF S+ + + P YLAMSQAFPYLQAG+Q + + +A++ NR + RDVE+TSVV N Sbjct: 12 HPFRHVSSRAALEKIFPHYLAMSQAFPYLQAGAQANAVLEAIKSNRPMTRDVEITSVVGN 71 Query: 206 FICWDETGGYGRVLRGGKTALPDILATED-FHSNLLRKDASRLLGRTIQPNYSATTKRYL 264 F+CWDETGG + R GK L IL T FH++LL+ D L G P++SA T YL Sbjct: 72 FLCWDETGGAYVIERYGKQGLHSILDTGKWFHASLLKNDIETLTGHVATPDFSAPTGPYL 131 Query: 265 HSLYAGLSAKDPVVRCAYMVAFELHAAEMIQSLWTTLVKTFDAQSDDLEYFRTHVGGVDP 324 L AGL A + RCA MVAFELHA MI +LW + + + L YF+ HVGG DP Sbjct: 132 TKLLAGLGAPSALERCANMVAFELHANSMIDALWESTSRCYGVDRQGLVYFQCHVGGDDP 191 Query: 325 AEKYHGEMTTRLIREVVPADGNRRFLDEFDRAYRLSLQWCRDLL 368 AE YH EMT R+I+ +V + RF + +A ++ WC L+ Sbjct: 192 AEAYHVEMTRRMIQLIVGDEDIPRFAERVAQAVSDNISWCAALV 235 >ref|YP_001519714.1| hypothetical protein AM1_5439 [Acaryochloris marina MBIC11017] gb|ABW30395.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 127 Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 60/116 (51%), Positives = 86/116 (74%), Gaps = 1/116 (0%) Query: 381 IEHHGGCHCGAVKFYVRAPRELSAVRCNCSICQMSGFLHLLVSGDKLRIECGEEFLNTYQ 440 +++ G CHCGA++F V AP++L CNCSIC +GFLHL+V K ++ G++ L TYQ Sbjct: 1 MKYLGSCHCGAIQFEVEAPKDLQVDACNCSICSKAGFLHLIVPQSKFKLLKGQDTLTTYQ 60 Query: 441 FNKNIARHTFCRICGVKPFYRPRSNPTGFSVNIRCLDKRTIENITIEEFDGEHWEE 496 FN +A+HTFCR+CG+KPFY PRSNP G+ +N+RCLD + ++I + FDG +WE+ Sbjct: 61 FNTGVAQHTFCRVCGIKPFYIPRSNPDGYDINVRCLDTQP-DSIEVVPFDGVNWEQ 115 >ref|ZP_01223215.1| hypothetical protein GB2207_08196 [marine gamma proteobacterium HTCC2207] gb|EAS47774.1| hypothetical protein GB2207_08196 [marine gamma proteobacterium HTCC2207] Length = 161 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 62/114 (54%), Positives = 82/114 (71%) Query: 383 HHGGCHCGAVKFYVRAPRELSAVRCNCSICQMSGFLHLLVSGDKLRIECGEEFLNTYQFN 442 H GGCHCGAVKF + AP +L A CNCSIC SG ++V + R+ CG + TY FN Sbjct: 36 HRGGCHCGAVKFEIDAPSQLYAHACNCSICYQSGGDQMIVPASRFRLICGTSAMTTYTFN 95 Query: 443 KNIARHTFCRICGVKPFYRPRSNPTGFSVNIRCLDKRTIENITIEEFDGEHWEE 496 A+HTFC+ CG+KPFY PRSNP GFSVN+RC+++ IE+I ++ FDG++WE+ Sbjct: 96 TGAAQHTFCKHCGIKPFYTPRSNPDGFSVNLRCIERSHIESIEVDIFDGQNWEQ 149 >ref|YP_528823.1| hypothetical protein Sde_3356 [Saccharophagus degradans 2-40] gb|ABD82611.1| glutathione-dependent formaldehyde-activating, GFA [Saccharophagus degradans 2-40] Length = 129 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 58/116 (50%), Positives = 80/116 (68%), Gaps = 1/116 (0%) Query: 381 IEHHGGCHCGAVKFYVRAPRELSAVRCNCSICQMSGFLHLLVSGDKLRIECGEEFLNTYQ 440 +++ GGCHCG V+F + AP L V CNCSIC +GFLHL++ + ++ G++ + TY Sbjct: 1 MKYVGGCHCGEVRFEIEAPDALEVVSCNCSICNKTGFLHLILPLSRFKLLQGKQAITTYT 60 Query: 441 FNKNIARHTFCRICGVKPFYRPRSNPTGFSVNIRCLDKRTIENITIEEFDGEHWEE 496 FN +A+HTFC+ CGVKPFY PRSNP G +N+RCLD ++ I FDG HWE+ Sbjct: 61 FNTGVAKHTFCKHCGVKPFYTPRSNPDGIDINVRCLDNPP-ASLNITPFDGVHWED 115