BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0182.0072.p (535 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01000008.1| 3-methylcrotonoyl-CoA carboxylase beta subuni... 727 0.0 ref|YP_004688345.1| propionyl-CoA carboxylase beta subunit [Cupr... 620 e-175 ref|YP_002006836.1| propionyl-CoA carboxylase subunit beta [Cupr... 614 e-173 ref|YP_001431105.1| propionyl-CoA carboxylase [Roseiflexus caste... 580 e-163 ref|ZP_08778379.1| carboxyl transferase [Candidatus Odyssella th... 579 e-163 >ref|ZP_01000008.1| 3-methylcrotonoyl-CoA carboxylase beta subunit [Oceanicola batsensis HTCC2597] gb|EAQ02479.1| 3-methylcrotonoyl-CoA carboxylase beta subunit [Oceanicola batsensis HTCC2597] Length = 535 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/535 (63%), Positives = 419/535 (78%) Query: 1 MQRIGSVADVNSQAFRRNDCHNRQLAAELKERQRAARFHRPERDFERLRRQNKLFVRERL 60 M+RI S+ D N+ ++ N E RQ AAR RP+RD +RL RQNKL VRERL Sbjct: 1 MRRIESLIDTNAPDYKANHAAMTARLKEFHARQHAARHERPQRDIDRLARQNKLGVRERL 60 Query: 61 AALLDPETPFLELSTLAANKAYDGEVPSAAQVVGIGIVAGREVIVHADDASVKSGAWYPL 120 LLDP TPFLE STLAA + Y+G VP AA V GIGIV GREV +HA+DASVK GAWYP Sbjct: 61 KLLLDPGTPFLEFSTLAACREYEGAVPGAAVVTGIGIVQGREVAIHANDASVKGGAWYPH 120 Query: 121 SVKKIVRALDIAIENRLPVVHLCDCAGGFLPLQAEFFADRYHAGRILRNQSILSKMGVPQ 180 +VKKIVR LD+A+EN LPV+H+CD AGGFLPLQ F DRY GR+ RNQ LS+ +PQ Sbjct: 121 TVKKIVRLLDVALENHLPVIHICDSAGGFLPLQHGVFPDRYLGGRVFRNQVKLSQANIPQ 180 Query: 181 VAIVMGHCTAAGAYVPALSEYNIMVEGTGAIFLGGPPVVKAATGEHVSAEDLGGALMHTN 240 +AIV GHCTA GAYVP LS+YNI++EGTGAIFLGGPP+VKAATGE V ++LGGA+MHT+ Sbjct: 181 LAIVGGHCTAGGAYVPTLSDYNIIIEGTGAIFLGGPPLVKAATGEEVGVQELGGAVMHTS 240 Query: 241 VSGTSDYVASSEMHAIAIARDVVARFRQPAKTWIDRVAPEPPAYSACELYGIIPKDARAQ 300 +SGT DY A+SE A ++AR++V+++++ KT I+ A E P Y ELYGIIPKD + Q Sbjct: 241 ISGTGDYRAASEQQAFSLAREIVSQWKRKPKTLIETAAFEDPYYDPTELYGIIPKDRKTQ 300 Query: 301 FDMREIIARLVDGSRFHEYQPRYGTSLVCGFARLHGYQVGILANNGVLFSDSSLKGAHFI 360 FDMRE++AR+VDGSRFHEYQP YGT+++CGFA + GY+VGILANNGVLF+DSSLK AHF+ Sbjct: 301 FDMREVLARIVDGSRFHEYQPDYGTTMICGFAHIWGYKVGILANNGVLFNDSSLKAAHFM 360 Query: 361 QLCDKNRTPLLFLQNVTGFMVGREYERRGITKDGAKLIMAVSGASVPKFTIVCNSSHGAG 420 QLC++NRTPL+F QN+TG+MVGREYE RGI KDGAK++MA G+ VPKFT++ N+S+GAG Sbjct: 361 QLCNQNRTPLVFFQNITGYMVGREYEERGIAKDGAKMLMAQGGSVVPKFTVIANASYGAG 420 Query: 421 TYAMSGRAFDPRFVFSWPNSQISAMGAEQAAGVLTHVKARQLARAGGRLSEQELAAIREP 480 Y M GRA+D R +F WP ++I MGA+QAA + VK RQL R G LSE+E+AAIR+P Sbjct: 421 NYGMCGRAWDARTLFMWPQAEIGVMGADQAANTMADVKIRQLQREGKELSEEEIAAIRDP 480 Query: 481 ILEEYHERSSAYYATSEIWDDGILDPVDTRTALAIALSASLNAPIDAPQYGVFRL 535 +LE++ AY +TSE+WDDGILDP DTR AL +++SASLNAPID P YG+FRL Sbjct: 481 VLEKFKRDVEAYTSTSELWDDGILDPADTRNALGMSISASLNAPIDEPHYGIFRL 535 >ref|YP_004688345.1| propionyl-CoA carboxylase beta subunit [Cupriavidus necator N-1] gb|AEI82307.1| propionyl-CoA carboxylase beta subunit [Cupriavidus necator N-1] Length = 535 Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust. Identities = 301/536 (56%), Positives = 383/536 (71%), Gaps = 4/536 (0%) Query: 1 MQRIGSVADVNSQAFRRNDCHNRQLAAELKERQRAARFHRPERDFERLRRQNKLFVRERL 60 M+RI S + S+ F+ N HN +L E R RPERD +RLR Q KL VRERL Sbjct: 3 MRRIESRINTRSEGFKANRAHNLRLREEFLAMMHDVRHVRPERDVKRLRDQGKLLVRERL 62 Query: 61 AALLDPETPFLELSTLAANKA-YDGEVPSAAQVVGIGIVAGREVIVHADDASVKSGAWYP 119 LLDP TPFLELS LAAN A YD + A V GIG+V GREV+V A+D+++K GA YP Sbjct: 63 DLLLDPGTPFLELSPLAANHAKYDAHIKGAGIVTGIGVVNGREVMVLANDSAIKGGAVYP 122 Query: 120 LSVKKIVRALDIAIENRLPVVHLCDCAGGFLPLQAEFFADRYHAGRILRNQSILSKMGVP 179 L +K +RAL IA+ENRLP+VHL D AG +LP+Q + F + G + +Q LS GV Sbjct: 123 LGARKSIRALKIALENRLPIVHLVDSAGAYLPMQMDIF---HEGGHMFYSQCRLSAAGVE 179 Query: 180 QVAIVMGHCTAAGAYVPALSEYNIMVEGTGAIFLGGPPVVKAATGEHVSAEDLGGALMHT 239 QVA+ MGHCTA GAYVP LS+Y+IMV G+ +FLGGPP+VKAATGE +SA +LGGA +HT Sbjct: 180 QVAVAMGHCTAGGAYVPTLSDYSIMVRGSSGVFLGGPPLVKAATGEDISAAELGGADVHT 239 Query: 240 NVSGTSDYVASSEMHAIAIARDVVARFRQPAKTWIDRVAPEPPAYSACELYGIIPKDARA 299 +SGT+DY SE IA+AR++V R+ K +D PE P Y ELYGIIP D + Sbjct: 240 RISGTADYAVDSETQGIALAREIVGTLRRRPKQAVDTREPEEPYYDPEELYGIIPDDIKK 299 Query: 300 QFDMREIIARLVDGSRFHEYQPRYGTSLVCGFARLHGYQVGILANNGVLFSDSSLKGAHF 359 QFDMRE+IARLVDGS FHEY+P YGT+LVCG+A L GY++GILANNGVLFS+++ K +F Sbjct: 300 QFDMREVIARLVDGSLFHEYKPDYGTTLVCGYAYLWGYKIGILANNGVLFSEAAEKATNF 359 Query: 360 IQLCDKNRTPLLFLQNVTGFMVGREYERRGITKDGAKLIMAVSGASVPKFTIVCNSSHGA 419 ++LCD++ PLLFL N+TGFM+GR+YE RGITKDGAK+IM S VPKF+++C++S GA Sbjct: 360 MELCDRDGVPLLFLHNITGFMIGRDYEHRGITKDGAKMIMVQSNVRVPKFSVLCHASFGA 419 Query: 420 GTYAMSGRAFDPRFVFSWPNSQISAMGAEQAAGVLTHVKARQLARAGGRLSEQELAAIRE 479 G Y M+GR +DPRF+F+WP+SQ + MGAEQAA L+ ++ LAR G + E+ AI + Sbjct: 420 GNYGMAGRGYDPRFLFAWPHSQCATMGAEQAARTLSQIRIAALAREGKQPDPAEIQAIHD 479 Query: 480 PILEEYHERSSAYYATSEIWDDGILDPVDTRTALAIALSASLNAPIDAPQYGVFRL 535 I +Y +S YY TSE+ DDG+LD VDTR AL +ALSASLNAP Q G+ R+ Sbjct: 480 QIHHDYTRSNSVYYQTSELRDDGVLDMVDTRNALGVALSASLNAPFGERQQGILRI 535 >ref|YP_002006836.1| propionyl-CoA carboxylase subunit beta [Cupriavidus taiwanensis LMG 19424] emb|CAQ70775.1| putative PROPIONYL-COA CARBOXYLASE (BETA SUBUNIT) PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 533 Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust. Identities = 302/536 (56%), Positives = 385/536 (71%), Gaps = 4/536 (0%) Query: 1 MQRIGSVADVNSQAFRRNDCHNRQLAAELKERQRAARFHRPERDFERLRRQNKLFVRERL 60 M+RI S S++++ N HN +L E + AR R ERD +RLR Q KL VRERL Sbjct: 1 MRRIESRISTRSESYKANREHNLRLRDEFRATMHDARHVRAERDVKRLRDQGKLLVRERL 60 Query: 61 AALLDPETPFLELSTLAANKA-YDGEVPSAAQVVGIGIVAGREVIVHADDASVKSGAWYP 119 LLDP+TPFLELS LAAN A YD + A V GIG+V GREV+V A+D+++K GA YP Sbjct: 61 DLLLDPDTPFLELSPLAANHAQYDAHIKGAGIVSGIGVVNGREVMVLANDSAIKGGAVYP 120 Query: 120 LSVKKIVRALDIAIENRLPVVHLCDCAGGFLPLQAEFFADRYHAGRILRNQSILSKMGVP 179 L +K +RAL IA+ENRLPVVHL D AG +LP+Q + F + G + Q LS GV Sbjct: 121 LGARKSIRALKIAMENRLPVVHLVDSAGAYLPMQMDIF---HEGGHMFHTQCRLSAAGVE 177 Query: 180 QVAIVMGHCTAAGAYVPALSEYNIMVEGTGAIFLGGPPVVKAATGEHVSAEDLGGALMHT 239 QVA+ +GHCTA GAYVP LS+Y+IMV G+GA+FLGGPP+VKAATGE +SA +LGGA +HT Sbjct: 178 QVAVALGHCTAGGAYVPTLSDYSIMVRGSGAVFLGGPPLVKAATGEDISAAELGGADVHT 237 Query: 240 NVSGTSDYVASSEMHAIAIARDVVARFRQPAKTWIDRVAPEPPAYSACELYGIIPKDARA 299 +SGT+DY SE IA+AR++V R+ K +D PE P Y ELYGIIP D R Sbjct: 238 RISGTADYAVDSESQGIALAREIVGTLRRRTKQPVDMREPEAPYYDPDELYGIIPDDIRK 297 Query: 300 QFDMREIIARLVDGSRFHEYQPRYGTSLVCGFARLHGYQVGILANNGVLFSDSSLKGAHF 359 QFDMRE+IARLVDGS FHEY+P YGT+LVCG+A L GY++GILANNGVLFS+++ K +F Sbjct: 298 QFDMREVIARLVDGSLFHEYKPDYGTTLVCGYAWLWGYKIGILANNGVLFSEAAEKATNF 357 Query: 360 IQLCDKNRTPLLFLQNVTGFMVGREYERRGITKDGAKLIMAVSGASVPKFTIVCNSSHGA 419 ++LCD++ PLLFL N+TGFM+GR+YE RGITKDGA++IM S VPKF+++C++S GA Sbjct: 358 MELCDRDGVPLLFLHNITGFMIGRDYEHRGITKDGARMIMVQSNVRVPKFSVLCHASFGA 417 Query: 420 GTYAMSGRAFDPRFVFSWPNSQISAMGAEQAAGVLTHVKARQLARAGGRLSEQELAAIRE 479 G Y M+GR ++PRF+F+WP+SQ + MGAEQAA L V+ LAR G + E+ AI + Sbjct: 418 GNYGMAGRGYEPRFLFAWPHSQCATMGAEQAARTLAQVRIAALAREGRQPDPAEIQAIHD 477 Query: 480 PILEEYHERSSAYYATSEIWDDGILDPVDTRTALAIALSASLNAPIDAPQYGVFRL 535 I +Y +S Y+ TSE+ DDG+LD VDTR AL IALSASLNAP + GV R+ Sbjct: 478 QIHRDYTRSNSVYHQTSELRDDGVLDMVDTRNALGIALSASLNAPFGERRQGVLRI 533 >ref|YP_001431105.1| propionyl-CoA carboxylase [Roseiflexus castenholzii DSM 13941] gb|ABU57087.1| Propionyl-CoA carboxylase [Roseiflexus castenholzii DSM 13941] Length = 535 Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust. Identities = 296/537 (55%), Positives = 382/537 (71%), Gaps = 4/537 (0%) Query: 1 MQRIGSVADVNSQAFRRNDCHNRQLAAELKERQRAARFHRPERDFERLRRQNKLFVRERL 60 M I S D +S FR N L +L+ R AR P ER R + KL VRER+ Sbjct: 1 MTTIKSFVDPHSATFRANAEAYATLLDDLRRRLAEARAGGPPEARERHRARGKLLVRERI 60 Query: 61 AALLDPETPFLELSTLAANKAYDGEVPSAAQVVGIGIVAGREVIVHADDASVKSGAWYPL 120 LLDP TPFLE+ LAA++ YD VP+A V GIG VAGREV++ A+DA+VK G +YPL Sbjct: 61 ERLLDPATPFLEIGALAAHEVYDEPVPAAGIVTGIGRVAGREVMIVANDATVKGGTYYPL 120 Query: 121 SVKKIVRALDIAIENRLPVVHLCDCAGGFLPLQAEFFADRYHAGRILRNQSILSKMGVPQ 180 +VKK +RA +IA +N LP ++L D G FLPLQAE F DR H GRI NQ+ +S G+ Q Sbjct: 121 TVKKHLRAQEIAEQNYLPCIYLVDSGGAFLPLQAEVFPDRDHFGRIFYNQARMSAKGIAQ 180 Query: 181 VAIVMGHCTAAGAYVPALSEYNIMVEGTGAIFLGGPPVVKAATGEHVSAEDLGGALMHTN 240 +A VMG CTA GAYVPA+S+ ++V G G IFLGGPP+VKAATGE VSAEDLGGA++HT+ Sbjct: 181 IAAVMGSCTAGGAYVPAMSDEVVIVRGAGTIFLGGPPLVKAATGEEVSAEDLGGAVVHTH 240 Query: 241 VSGTSDYVASSEMHAIAIARDVVARF--RQPAKTWIDRVAPEPPAYSACELYGIIPKDAR 298 +SG +D++A +++HA+AI R +V R+PA W R PE P Y ELYGIIP+D R Sbjct: 241 ISGVADHLAENDLHALAIVRSIVEHLGPRRPA-LWEWR-EPEAPLYDPRELYGIIPRDPR 298 Query: 299 AQFDMREIIARLVDGSRFHEYQPRYGTSLVCGFARLHGYQVGILANNGVLFSDSSLKGAH 358 + +D+RE+IAR+VDGSR HE++P YG +LVCGFA + G VGI+ANNGVLFS+S+LKG H Sbjct: 299 SSYDVREVIARIVDGSRMHEFKPTYGETLVCGFAHIAGAPVGIIANNGVLFSESALKGTH 358 Query: 359 FIQLCDKNRTPLLFLQNVTGFMVGREYERRGITKDGAKLIMAVSGASVPKFTIVCNSSHG 418 FI+LC PL+FLQN+TGFMVG+EYE+RGI KDGAK++MAV+ A VPKFT+V S G Sbjct: 359 FIELCCARGIPLVFLQNITGFMVGKEYEQRGIAKDGAKMVMAVANAQVPKFTVVIGGSFG 418 Query: 419 AGTYAMSGRAFDPRFVFSWPNSQISAMGAEQAAGVLTHVKARQLARAGGRLSEQELAAIR 478 AG YAM GRA++PR ++ WPN++IS MG +QAA VL V+ L G +S E A Sbjct: 419 AGNYAMCGRAYEPRQLWMWPNARISVMGGQQAASVLLTVRLDALRARGLDMSSAEREAFT 478 Query: 479 EPILEEYHERSSAYYATSEIWDDGILDPVDTRTALAIALSASLNAPIDAPQYGVFRL 535 PIL Y S YYAT+ +WDDG++DP DTRT LA+ L+A+ +AP++ ++GVFR+ Sbjct: 479 APILATYEREGSPYYATARLWDDGVIDPADTRTVLALGLAAAAHAPVETTRFGVFRM 535 >ref|ZP_08778379.1| carboxyl transferase [Candidatus Odyssella thessalonicensis L13] Length = 534 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 279/527 (52%), Positives = 377/527 (71%), Gaps = 5/527 (0%) Query: 11 NSQAFRRNDCHNRQLAAELKERQRAARFHRP--ERDFERLRRQNKLFVRERLAALLDPET 68 NS F +N L +LK Q+ R H+ + +R + +NKL RER+ LLD + Sbjct: 11 NSSDFVKNQAMMLSLVDDLK--QKLDRIHQGGGKNARQRHKDRNKLLARERIDLLLDVGS 68 Query: 69 PFLELSTLAANKAYDGEVPSAAQVVGIGIVAGREVIVHADDASVKSGAWYPLSVKKIVRA 128 PFLE LA ++ Y+ +VP+A + GIG + GRE I+ A+DA+VK G +YPL+VKK +RA Sbjct: 69 PFLEFGALAGDQVYEDDVPAAGIITGIGRIHGRECIIVANDATVKGGTYYPLTVKKHLRA 128 Query: 129 LDIAIENRLPVVHLCDCAGGFLPLQAEFFADRYHAGRILRNQSILSKMGVPQVAIVMGHC 188 +IA+EN LP ++L D G FLPLQA+ F DR H GRI NQ+ LS G+PQ+AIVMG C Sbjct: 129 QEIALENNLPCLYLVDSGGAFLPLQAQVFPDRDHFGRIFYNQAQLSAKGIPQIAIVMGSC 188 Query: 189 TAAGAYVPALSEYNIMVEGTGAIFLGGPPVVKAATGEHVSAEDLGGALMHTNVSGTSDYV 248 TA GAYVPA+ + +I+V+GTG IFLGGPP+VKAATGE V+AE+LGG +H SG D++ Sbjct: 189 TAGGAYVPAMCDQSIIVKGTGTIFLGGPPLVKAATGEEVTAEELGGGDLHARTSGVVDHL 248 Query: 249 ASSEMHAIAIARDVVARFRQPAKTWIDRVAPEPPAYSACELYGIIPKDARAQFDMREIIA 308 A S+ HA+ IAR +V P W+ + A E P Y+ +LYGI+P D R +D+REIIA Sbjct: 249 AHSDEHALQIARQIVETLPHPTP-WLSQAAVEAPLYNEEDLYGILPTDVRQPYDVREIIA 307 Query: 309 RLVDGSRFHEYQPRYGTSLVCGFARLHGYQVGILANNGVLFSDSSLKGAHFIQLCDKNRT 368 R+VDGSR E++P YGT+LVCGFAR++GYQVGI+ANNG+LFS+S+LKGAHFI+LC + + Sbjct: 308 RIVDGSRLDEFKPLYGTTLVCGFARIYGYQVGIIANNGILFSESALKGAHFIELCCQRKI 367 Query: 369 PLLFLQNVTGFMVGREYERRGITKDGAKLIMAVSGASVPKFTIVCNSSHGAGTYAMSGRA 428 PL+FLQN++GFMVG +YE GI +DGAKL+ AV+ A+VPKFT+ S GAG YAM GRA Sbjct: 368 PLVFLQNISGFMVGSKYEAGGIARDGAKLVHAVACANVPKFTVTIGGSFGAGNYAMCGRA 427 Query: 429 FDPRFVFSWPNSQISAMGAEQAAGVLTHVKARQLARAGGRLSEQELAAIREPILEEYHER 488 + PRF+++WPNS+IS MG EQAA VL+ ++ LA+ G Q+L + I +Y E Sbjct: 428 YSPRFMWTWPNSRISVMGGEQAATVLSLIRQDALAQKGEVWPAQDLEEFKNAIRSKYEEE 487 Query: 489 SSAYYATSEIWDDGILDPVDTRTALAIALSASLNAPIDAPQYGVFRL 535 S YYA++ +WDDG++DP DTR L ++++ASLN PID ++GVFR+ Sbjct: 488 GSPYYASARLWDDGVIDPKDTRRVLGLSIAASLNKPIDDMKFGVFRM 534