BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0182.0052.p         (109 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002494998.1| IS66 Orf2 family protein [Methylobacterium n...   128   3e-28
ref|ZP_08859721.1| IS66 Orf2 family protein [Ruegeria sp. TW15]       124   4e-27
ref|NP_768422.1| transposase [Bradyrhizobium japonicum USDA 110]...   124   6e-27
ref|YP_001220515.1| IS66 family element, orf2 [Bradyrhizobium sp...   122   1e-26
emb|CAO86212.1| unnamed protein product [Microcystis aeruginosa ...   122   2e-26

>ref|YP_002494998.1| IS66 Orf2 family protein [Methylobacterium nodulans ORS 2060]
 ref|YP_002499516.1| IS66 Orf2 family protein [Methylobacterium nodulans ORS 2060]
 ref|YP_002501419.1| IS66 Orf2 family protein [Methylobacterium nodulans ORS 2060]
 gb|ACL59213.1| IS66 Orf2 family protein [Methylobacterium nodulans ORS 2060]
 gb|ACL61116.1| IS66 Orf2 family protein [Methylobacterium nodulans ORS 2060]
 gb|ACL62506.1| IS66 Orf2 family protein [Methylobacterium nodulans ORS 2060]
          Length = 118

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 81/109 (74%), Gaps = 2/109 (1%)

Query: 3   IWIATQPVDFRRGMDSLALLVSEAFGADPFDGGLWVFRSKRRDRVKILTWDGSGLVLYYK 62
           + +AT+PVDFR+G+D LA LV EA GADPF G ++VFRSKR DR K+L WDGSG+VL  K
Sbjct: 10  VMLATRPVDFRKGIDGLAALVREAMGADPFSGTVYVFRSKRADRTKLLFWDGSGVVLAAK 69

Query: 63  RIE-GQFTWPPIKEGVMSLSHAQLSVLLDGSDWKRV-PMRPVDQPVRAG 109
           R+E GQF WP  ++GV+ L+ AQLS LL+G DWKRV   R V  P  AG
Sbjct: 70  RLEDGQFCWPKAQDGVVRLTAAQLSALLEGLDWKRVHEARQVSAPAVAG 118


>ref|ZP_08859721.1| IS66 Orf2 family protein [Ruegeria sp. TW15]
          Length = 116

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/104 (54%), Positives = 75/104 (72%), Gaps = 1/104 (0%)

Query: 4   WIATQPVDFRRGMDSLALLVSEAFGADPFDGGLWVFRSKRRDRVKILTWDGSGLVLYYKR 63
           ++AT+PVDFR+GMD LA +V   F  DPF G +++FRSKR DR+K++ WDG+GLVL YKR
Sbjct: 11  YVATKPVDFRKGMDGLAAIVLNEFDLDPFSGTIFIFRSKRADRLKLIVWDGTGLVLVYKR 70

Query: 64  IEGQ-FTWPPIKEGVMSLSHAQLSVLLDGSDWKRVPMRPVDQPV 106
           IEG+ F WP +  GVM+++ AQ   L +G DWKRV  R    PV
Sbjct: 71  IEGKGFEWPRVANGVMTMTKAQFEALFEGLDWKRVVARGTRHPV 114


>ref|NP_768422.1| transposase [Bradyrhizobium japonicum USDA 110]
 ref|NP_768800.1| transposase [Bradyrhizobium japonicum USDA 110]
 gb|AAG60767.1|AF322012_72 ID152 [Bradyrhizobium japonicum]
 dbj|BAC47047.1| blr1782 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47425.1| bll2160 [Bradyrhizobium japonicum USDA 110]
          Length = 117

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 1/106 (0%)

Query: 1   LSIWIATQPVDFRRGMDSLALLVSEAFGADPFDGGLWVFRSKRRDRVKILTWDGSGLVLY 60
           + I +AT+PVDFR+G D LA LV E    DPF G ++VFRSKR DR+KI  WDGSGLVL 
Sbjct: 8   VKIMVATRPVDFRKGADGLAALVREQLHHDPFAGTIFVFRSKRADRLKIFAWDGSGLVLL 67

Query: 61  YKRIE-GQFTWPPIKEGVMSLSHAQLSVLLDGSDWKRVPMRPVDQP 105
           +KR+E   F WPPI +GVM LS +QL+ L+DG DW R+  R + QP
Sbjct: 68  WKRLEHSAFRWPPISDGVMRLSASQLAALMDGLDWSRLHARDIGQP 113


>ref|YP_001220515.1| IS66 family element, orf2 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39843.1| Putative transposase; putative IS66 family element, orf2
           [Bradyrhizobium sp. BTAi1]
          Length = 117

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/106 (57%), Positives = 75/106 (70%), Gaps = 1/106 (0%)

Query: 1   LSIWIATQPVDFRRGMDSLALLVSEAFGADPFDGGLWVFRSKRRDRVKILTWDGSGLVLY 60
           L I++ATQPVDFR+G + LALL  E  G DP  G   VFR+KR DRVKI+ WDGSGLV+Y
Sbjct: 8   LMIYVATQPVDFRKGAEGLALLAKETLGHDPMKGVAVVFRAKRADRVKIVVWDGSGLVMY 67

Query: 61  YKRIEGQ-FTWPPIKEGVMSLSHAQLSVLLDGSDWKRVPMRPVDQP 105
           +KR++G  F WPPI  GVM ++ AQLS LL G DW R+    + QP
Sbjct: 68  WKRLDGSGFKWPPIVAGVMRMNAAQLSALLAGMDWTRMHAPRIPQP 113


>emb|CAO86212.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 117

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 82/110 (74%), Gaps = 1/110 (0%)

Query: 1   LSIWIATQPVDFRRGMDSLALLVSEAFGADPFDGGLWVFRSKRRDRVKILTWDGSGLVLY 60
           + +++AT+PVDFR+G+D LAL V E FG DPF G ++VFRSKR DR+K+L WD +G+VL 
Sbjct: 8   VKVFVATRPVDFRKGIDGLALAVQEMFGLDPFCGAVFVFRSKRADRIKLLAWDQTGMVLV 67

Query: 61  YKRIE-GQFTWPPIKEGVMSLSHAQLSVLLDGSDWKRVPMRPVDQPVRAG 109
           +KR+E G+F WP +++GVM +S AQ++ L +G DW+ V      +P+ AG
Sbjct: 68  HKRLEGGKFVWPQVRDGVMRMSSAQMAALFEGLDWRLVRPERARRPLTAG 117