BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0182.0044.p         (136 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774854.2| transposase [Bradyrhizobium japonicum USDA 110]      156   8e-37
ref|YP_319014.1| transposase IS3/IS911 [Nitrobacter winogradskyi...   144   3e-33
ref|YP_317485.1| transposase IS3/IS911 [Nitrobacter winogradskyi...   144   4e-33
ref|YP_002287979.1| transposase IS3 [Oligotropha carboxidovorans...   140   8e-32
ref|YP_576550.1| transposase IS3/IS911 [Nitrobacter hamburgensis...   139   1e-31

>ref|NP_774854.2| transposase [Bradyrhizobium japonicum USDA 110]
          Length = 136

 Score =  156 bits (395), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 78/105 (74%), Positives = 89/105 (84%)

Query: 1   LRKAEFWFVVATRSKDETESGPGKAPAEQGLKDIRRQARRHYSAEEKTRTLLEGLRGEEN 60
           +R+ +FWF+VATRS+DE E   G++ AEQ LKDI RQ RRHYS+EEK R +LEGLRGEEN
Sbjct: 1   MRREDFWFIVATRSEDEAEIRTGQSAAEQVLKDILRQTRRHYSSEEKIRIVLEGLRGEEN 60

Query: 61  ISKLYCREGIVASMHYDRSKEFLEAGKRRLAGDTARAATSGEVKD 105
           IS+L  REGI ASM+Y  SKEFLEAGKRRLAGDTARAATSGEVKD
Sbjct: 61  ISELCRREGIAASMYYGWSKEFLEAGKRRLAGDTARAATSGEVKD 105


>ref|YP_319014.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 ref|YP_319040.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 ref|YP_319466.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 gb|ABA05662.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 gb|ABA05688.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 gb|ABA06114.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
          Length = 124

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/86 (86%), Positives = 77/86 (89%)

Query: 20  SGPGKAPAEQGLKDIRRQARRHYSAEEKTRTLLEGLRGEENISKLYCREGIVASMHYDRS 79
           SGPGKAPAEQ LKDIRRQ RRHYSAEEK R +LEGLRGEENIS+L  REGI ASM+Y  S
Sbjct: 5   SGPGKAPAEQVLKDIRRQTRRHYSAEEKIRIVLEGLRGEENISELCRREGIAASMYYGWS 64

Query: 80  KEFLEAGKRRLAGDTARAATSGEVKD 105
           KEFLEAGKRRLAGDTARAATSGEVKD
Sbjct: 65  KEFLEAGKRRLAGDTARAATSGEVKD 90


>ref|YP_317485.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 ref|YP_317758.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 ref|YP_319482.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 ref|YP_319544.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 ref|YP_319704.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 gb|ABA04133.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 gb|ABA04406.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 gb|ABA06130.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 gb|ABA06192.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
 gb|ABA06352.1| transposase IS3/IS911 [Nitrobacter winogradskyi Nb-255]
          Length = 124

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/86 (86%), Positives = 77/86 (89%)

Query: 20  SGPGKAPAEQGLKDIRRQARRHYSAEEKTRTLLEGLRGEENISKLYCREGIVASMHYDRS 79
           SGPGKAPAEQ LKDIRRQ RRHYSAEEK R +LEGLRGEENIS+L  REGI ASM+Y  S
Sbjct: 5   SGPGKAPAEQVLKDIRRQTRRHYSAEEKIRIVLEGLRGEENISELCRREGIAASMYYGWS 64

Query: 80  KEFLEAGKRRLAGDTARAATSGEVKD 105
           KEFLEAGKRRLAGDTARAATSGEVKD
Sbjct: 65  KEFLEAGKRRLAGDTARAATSGEVKD 90


>ref|YP_002287979.1| transposase IS3 [Oligotropha carboxidovorans OM5]
 ref|YP_004633909.1| transposase [Oligotropha carboxidovorans OM5]
 gb|ACI92114.1| transposase IS3 [Oligotropha carboxidovorans OM5]
 gb|AEI07668.1| transposase [Oligotropha carboxidovorans OM5]
          Length = 115

 Score =  140 bits (352), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 73/95 (76%), Positives = 80/95 (84%)

Query: 20  SGPGKAPAEQGLKDIRRQARRHYSAEEKTRTLLEGLRGEENISKLYCREGIVASMHYDRS 79
           SGPGKAPA+Q LKDIRRQ RR YSAEEK R +LEGLRGEENIS+L  REGI ASM+Y  S
Sbjct: 5   SGPGKAPADQVLKDIRRQTRRQYSAEEKIRIVLEGLRGEENISELCRREGIAASMYYGWS 64

Query: 80  KEFLEAGKRRLAGDTARAATSGEVKDQLKKLKKLR 114
           KEFLEAGKRRLAGDTARAATSG+VKD  +K   L+
Sbjct: 65  KEFLEAGKRRLAGDTARAATSGDVKDLRRKATALK 99


>ref|YP_576550.1| transposase IS3/IS911 [Nitrobacter hamburgensis X14]
 gb|ABE62090.1| transposase IS3/IS911 [Nitrobacter hamburgensis X14]
          Length = 121

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/86 (83%), Positives = 75/86 (87%)

Query: 20  SGPGKAPAEQGLKDIRRQARRHYSAEEKTRTLLEGLRGEENISKLYCREGIVASMHYDRS 79
           SGP KAPAEQ LKDIRRQ RR YSAEEK R +LEGLRGEENIS+L  REGI ASM+Y  S
Sbjct: 5   SGPDKAPAEQVLKDIRRQTRRQYSAEEKIRIVLEGLRGEENISELCRREGIAASMYYGWS 64

Query: 80  KEFLEAGKRRLAGDTARAATSGEVKD 105
           KEFLEAGKRRLAGDTARAATSGEVKD
Sbjct: 65  KEFLEAGKRRLAGDTARAATSGEVKD 90