BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0182.0033.p         (158 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769111.1| hypothetical protein bll2471 [Bradyrhizobium ja...   181   5e-44
ref|YP_004110152.1| hemerythrin HHE cation-binding domain-contai...   116   1e-24
ref|NP_947005.1| hemerythrin HHE cation binding region [Rhodopse...   110   8e-23
ref|YP_001239996.1| hypothetical protein BBta_4024 [Bradyrhizobi...   108   2e-22
ref|YP_533672.1| hemerythrin HHE cation binding region [Rhodopse...   105   2e-21

>ref|NP_769111.1| hypothetical protein bll2471 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47736.1| bll2471 [Bradyrhizobium japonicum USDA 110]
          Length = 187

 Score =  181 bits (458), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 96/136 (70%), Positives = 108/136 (79%)

Query: 1   VYHHPQEDLIFSKLRTRDPDAAAIVGDLAHEHQEVIDRLHHFAQAIDAILADREILRQDV 60
           VYHHPQEDL+F+KL+ RDP AAA VGDLA EHQ+  + L   A A+D +LADRE+LRQDV
Sbjct: 51  VYHHPQEDLVFAKLQIRDPAAAAKVGDLAREHQKGAELLRRVAHAVDNVLADRELLRQDV 110

Query: 61  GNIVRDFILRERHHMMWEERDFFPAAVKALSAEDWTEIASARTDHGDLLFSETAEATSDA 120
             IVRDFI  ER H+M E+RDFFPAA+KAL  EDWTEIASA T+  D LFSE AE T DA
Sbjct: 111 DAIVRDFIEHERRHIMKEDRDFFPAALKALEPEDWTEIASAMTNPEDPLFSEAAEETFDA 170

Query: 121 LRAHILQLEQEAEAER 136
           LRA ILQLEQEAEAER
Sbjct: 171 LRARILQLEQEAEAER 186


>ref|YP_004110152.1| hemerythrin HHE cation-binding domain-containing protein
           [Rhodopseudomonas palustris DX-1]
 gb|ADU45419.1| Hemerythrin HHE cation binding domain protein [Rhodopseudomonas
           palustris DX-1]
          Length = 195

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 86/136 (63%)

Query: 3   HHPQEDLIFSKLRTRDPDAAAIVGDLAHEHQEVIDRLHHFAQAIDAILADREILRQDVGN 62
           HHP+ED+++  L+ R P  A  VGD+  EH+  +DRL HFA+ +D +LAD+E+ RQ   +
Sbjct: 55  HHPKEDVVYQILKERSPAVAGTVGDIEKEHELEVDRLAHFAKVVDDVLADQELPRQTFHS 114

Query: 63  IVRDFILRERHHMMWEERDFFPAAVKALSAEDWTEIASARTDHGDLLFSETAEATSDALR 122
             +DFI  +R HM+ EE+  FPAA++ L+ EDW++I S   D  D +F     +    L 
Sbjct: 115 AAQDFIEHQRRHMLKEEQLLFPAALETLTPEDWSKIDSRIDDRKDPMFDGETASKFQNLY 174

Query: 123 AHILQLEQEAEAERSS 138
           A IL+ EQE EAERS 
Sbjct: 175 ATILRWEQETEAERSK 190


>ref|NP_947005.1| hemerythrin HHE cation binding region [Rhodopseudomonas palustris
           CGA009]
 ref|YP_001990856.1| Hemerythrin HHE cation binding domain-containing protein
           [Rhodopseudomonas palustris TIE-1]
 emb|CAE27100.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
 gb|ACF00381.1| Hemerythrin HHE cation binding domain protein [Rhodopseudomonas
           palustris TIE-1]
          Length = 196

 Score =  110 bits (275), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 85/138 (61%)

Query: 3   HHPQEDLIFSKLRTRDPDAAAIVGDLAHEHQEVIDRLHHFAQAIDAILADREILRQDVGN 62
           HHP+ED+++  L+ R+P  A  VGD+  EH+  +DRL +FA+ +D +LAD+E+ RQ    
Sbjct: 55  HHPKEDVVYRILKERNPAVAGTVGDIEKEHELEVDRLANFAKVVDDVLADQELPRQTFHA 114

Query: 63  IVRDFILRERHHMMWEERDFFPAAVKALSAEDWTEIASARTDHGDLLFSETAEATSDALR 122
             RDFI  +R HM+ EE+  FPAA++ L+ EDW +I +   D  D +F     +    L 
Sbjct: 115 AARDFIEHQRRHMLKEEQLLFPAALETLTPEDWAKIDARIDDRKDPMFDGETASKFQNLY 174

Query: 123 AHILQLEQEAEAERSSVA 140
           A IL+ EQE  A+RS  +
Sbjct: 175 ATILRWEQETAADRSKTS 192


>ref|YP_001239996.1| hypothetical protein BBta_4024 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36090.1| hypothetical protein BBta_4024 [Bradyrhizobium sp. BTAi1]
          Length = 193

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/138 (46%), Positives = 83/138 (60%)

Query: 3   HHPQEDLIFSKLRTRDPDAAAIVGDLAHEHQEVIDRLHHFAQAIDAILADREILRQDVGN 62
           HHP+E++IFS+LR RDP AAA  GD+  EH+    RL  FA A++A+LAD+EILR+    
Sbjct: 55  HHPKEEMIFSRLRERDPAAAATYGDVDDEHESEAQRLRGFADAVNAVLADQEILRESFHA 114

Query: 63  IVRDFILRERHHMMWEERDFFPAAVKALSAEDWTEIASARTDHGDLLFSETAEATSDALR 122
            V  FI  +R H+  EE   FPAA+ AL AEDW +I +  +D  D LF          L 
Sbjct: 115 AVHQFIDSQREHLRKEETLLFPAALHALRAEDWADIDARMSDEKDPLFDGDVAEKFHNLE 174

Query: 123 AHILQLEQEAEAERSSVA 140
             IL+ EQEAE  R + A
Sbjct: 175 RTILRWEQEAEQARLAAA 192


>ref|YP_533672.1| hemerythrin HHE cation binding region [Rhodopseudomonas palustris
           BisB18]
 gb|ABD89353.1| Hemerythrin HHE cation binding region [Rhodopseudomonas palustris
           BisB18]
          Length = 196

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 83/138 (60%)

Query: 3   HHPQEDLIFSKLRTRDPDAAAIVGDLAHEHQEVIDRLHHFAQAIDAILADREILRQDVGN 62
           HHP+ED++F  L+ R+P  AA VGD+  EH+   +RL  F+Q ID ILAD+EI RQ V  
Sbjct: 55  HHPKEDVVFDILKQRNPAVAAAVGDVQSEHRLEAERLRRFSQMIDDILADQEIPRQTVHI 114

Query: 63  IVRDFILRERHHMMWEERDFFPAAVKALSAEDWTEIASARTDHGDLLFSETAEATSDALR 122
              DFI  +R HM  EE   FPAA++ L+A DW +I +   D  D +F    EA    L 
Sbjct: 115 AAEDFIDHQRRHMAKEEHLLFPAALETLTAADWAKIDARVDDRKDPMFDGAVEARFQNLH 174

Query: 123 AHILQLEQEAEAERSSVA 140
           + IL+ E+E E +R  ++
Sbjct: 175 STILRWEKETEEQRLKMS 192