BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0182.0031.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769230.1| hypothetical protein bll2590 [Bradyrhizobium ja... 262 4e-68 ref|YP_780658.1| UspA domain-containing protein [Rhodopseudomona... 171 1e-40 ref|YP_533895.1| hypothetical protein RPC_4050 [Rhodopseudomonas... 164 2e-38 ref|YP_568484.1| hypothetical protein RPD_1345 [Rhodopseudomonas... 161 8e-38 ref|YP_484987.1| hypothetical protein RPB_1366 [Rhodopseudomonas... 157 1e-36 >ref|NP_769230.1| hypothetical protein bll2590 [Bradyrhizobium japonicum USDA 110] dbj|BAC47855.1| bll2590 [Bradyrhizobium japonicum USDA 110] Length = 316 Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 137/264 (51%), Positives = 177/264 (67%), Gaps = 1/264 (0%) Query: 1 VRAAVNGSISFALSTGAHLDVVAIGYERTIIPLAALSGVAVTSVFEIEQARALERAEAAL 60 +R ++GSIS A AHLD VA+GY T G AV +VFE+E+ RA+ERAEAAL Sbjct: 53 MRPVIDGSISLAAHFNAHLDAVAVGYVATSAAYVMEGGAAVAAVFELERERAVERAEAAL 112 Query: 61 RVFDLRARSSGISYASRALSAVPAEARRSICASARVHDMTIVTQPQSGYESYDNVIPKDV 120 VF A ++GISY R + A+PA+A S+ AR+HD++IV QP S+DN +P+++ Sbjct: 113 AVFGSEAANAGISYTCRPIGAIPADAAGSLGEMARLHDLSIVLQPNPEQGSFDNDLPREI 172 Query: 121 LLQAGKPVLYLPSVIHGSFSARRIGICWDGSRLAARALHDAMPLLREADALTIIAMTDAH 180 L AG PVL+LP G+F A RIGICWDGSRLAARA+ DA P L A+ + II + +A Sbjct: 173 LFHAGGPVLFLPYTFRGAFKANRIGICWDGSRLAARAMRDAAPFLARAEEIVIITINEAD 232 Query: 181 KVPAESSADHLGRYLERSGLPAKIVSLPAPQS-VHRALLSLVADESLDLLVMGGYVRSRL 239 VP E SA +L R+L R GL + V L A +S + +LSL ADESLDLLVMGGY SRL Sbjct: 233 TVPGEVSAGNLARHLGRRGLSTRTVGLSATRSEIQPTILSLAADESLDLLVMGGYGHSRL 292 Query: 240 QERLLGGISGNLLRANVIPVLMSH 263 QER+LGG++ +L A +P LMSH Sbjct: 293 QERVLGGVTRAMLEAMTVPTLMSH 316 >ref|YP_780658.1| UspA domain-containing protein [Rhodopseudomonas palustris BisA53] gb|ABJ05678.1| UspA domain protein [Rhodopseudomonas palustris BisA53] Length = 277 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 94/260 (36%), Positives = 149/260 (57%), Gaps = 2/260 (0%) Query: 5 VNGSISFALSTGAHLDVVAIGYERTIIPLAALSGVAVTSVFEIEQARALERAEAALRVFD 64 ++ +IS A AHLD +A Y+ I P + A + L++A L F+ Sbjct: 19 IDSAISLAQLFDAHLDGIACAYQ-PINPSIVVGASAAYFAEATQYNTDLDQAARRLDQFE 77 Query: 65 LRARSSGISYASRALSAVPAEARRSICASARVHDMTIVTQPQSGYESYDNVIPKDVLLQA 124 + R +G+S+ R ++ PA A ++ R++D+ IV QP S+ + +P+ +L + Sbjct: 78 IAVRQTGLSHGGRTIADSPALANEALSEIGRLYDLNIVAQPDPSRPSHYDGLPEALLFNS 137 Query: 125 GKPVLYLPSVIHGSFSARRIGICWDGSRLAARALHDAMPLLREADALTIIAMTDAHKVPA 184 G+P+L +P + G S R+ ICWD SR AARA+HDA+PLLR+A + I+ + + + P Sbjct: 138 GRPLLLVPYIHSGPISPDRVLICWDASRPAARAVHDALPLLRKAQTIEIVTINEDEEAPG 197 Query: 185 ESSADHLGRYLERSGLPAKIVSLP-APQSVHRALLSLVADESLDLLVMGGYVRSRLQERL 243 E+ D L +L R L A AP ++H A+LSL AD S DL+VMGGY SRL+E + Sbjct: 198 EACCDRLIDHLARHDLAATANKFDCAPGAIHSAILSLAADTSADLMVMGGYGHSRLREFI 257 Query: 244 LGGISGNLLRANVIPVLMSH 263 LGG++ + ++ +P LM+H Sbjct: 258 LGGVTRGMFKSLTVPTLMAH 277 >ref|YP_533895.1| hypothetical protein RPC_4050 [Rhodopseudomonas palustris BisB18] gb|ABD89576.1| UspA [Rhodopseudomonas palustris BisB18] Length = 277 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 146/260 (56%), Gaps = 2/260 (0%) Query: 5 VNGSISFALSTGAHLDVVAIGYERTIIPLAALSGVAVTSVFEIEQARALERAEAALRVFD 64 ++ +IS A AHLD +A Y+ I P + A + L+ A L F+ Sbjct: 19 IDCAISVAKLFDAHLDGIACAYQ-PINPAIVVGASAAYFADATQYNTDLDLAAQRLDQFE 77 Query: 65 LRARSSGISYASRALSAVPAEARRSICASARVHDMTIVTQPQSGYESYDNVIPKDVLLQA 124 + RSSG+ + R L PA A +++ +R++D++IV Q S+ + +P+ VL + Sbjct: 78 IAVRSSGLLHGGRTLCDSPALANQTLSEISRLYDLSIVAQADRARPSHHDALPEAVLFNS 137 Query: 125 GKPVLYLPSVIHGSFSARRIGICWDGSRLAARALHDAMPLLREADALTIIAMTDAHKVPA 184 G+P+L +P + G R+ ICWDGSR AARA+ DA P L +A + I+A+ + VP Sbjct: 138 GQPMLLMPYIHTGPLKLDRVLICWDGSRPAARAVRDATPFLHKAAQIEIVAINEDDDVPE 197 Query: 185 ESSADHLGRYLERSGLPAKIVSLPA-PQSVHRALLSLVADESLDLLVMGGYVRSRLQERL 243 E S+D L +L R L A P ++H A+LSL AD S DLLVMGGY SR++E + Sbjct: 198 ELSSDALVAHLARHDLAASANKFACEPANIHSAILSLAADTSADLLVMGGYGHSRIREFV 257 Query: 244 LGGISGNLLRANVIPVLMSH 263 LGG++ + ++ +P LMSH Sbjct: 258 LGGVTRGMFKSLTVPALMSH 277 >ref|YP_568484.1| hypothetical protein RPD_1345 [Rhodopseudomonas palustris BisB5] gb|ABE38583.1| UspA [Rhodopseudomonas palustris BisB5] Length = 277 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 147/260 (56%), Gaps = 2/260 (0%) Query: 5 VNGSISFALSTGAHLDVVAIGYERTIIPLAALSGVAVTSVFEIEQARALERAEAALRVFD 64 V ++S A + GAHLD + Y+ I P + A + + A A L F+ Sbjct: 19 VGCAVSIAKAFGAHLDGIVCTYQ-PINPAIVVGASAAYYAAANQYNTDNDEAAARLDQFE 77 Query: 65 LRARSSGISYASRALSAVPAEARRSICASARVHDMTIVTQPQSGYESYDNVIPKDVLLQA 124 + AR++GI++ +R++ P A S+ +R++D+++V QP + + +P+ +L + Sbjct: 78 IAARAAGITHGARSICDTPVLANESLSEISRLYDLSVVPQPDRAKPGHQDPLPESILFNS 137 Query: 125 GKPVLYLPSVIHGSFSARRIGICWDGSRLAARALHDAMPLLREADALTIIAMTDAHKVPA 184 GKP+L +P + G R+ ICWDG R AARA+HDAMP LR A + ++A+ + + Sbjct: 138 GKPMLMVPYIHTGPMQLDRMLICWDGGRQAARAVHDAMPFLRRAKTIDVVAVNEDEEDVG 197 Query: 185 ESSADHLGRYLERSGLPAKIVSLPAPQ-SVHRALLSLVADESLDLLVMGGYVRSRLQERL 243 +SS D L +L R L A +P ++H +LSL AD D+LVMGGY SRL+E + Sbjct: 198 QSSTDALLAHLLRHDLAATAHRYTSPPGNIHNTILSLAADLGADMLVMGGYGHSRLREFI 257 Query: 244 LGGISGNLLRANVIPVLMSH 263 LGG++ + ++ +P L+SH Sbjct: 258 LGGVTRGIFKSLTLPALISH 277 >ref|YP_484987.1| hypothetical protein RPB_1366 [Rhodopseudomonas palustris HaA2] gb|ABD06076.1| UspA [Rhodopseudomonas palustris HaA2] Length = 277 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 149/262 (56%), Gaps = 6/262 (2%) Query: 5 VNGSISFALSTGAHLDVVAIGYERTIIPLAALSGVAVTSVFEIEQARALERAEAALRV-- 62 V+ ++S A + AHLD + Y+ I A + G + + Q + EAA R+ Sbjct: 19 VDCAVSVAKAFDAHLDGIVCTYQP--INPAVVVGASAAYYAAVNQYNT-DNDEAAARLDQ 75 Query: 63 FDLRARSSGISYASRALSAVPAEARRSICASARVHDMTIVTQPQSGYESYDNVIPKDVLL 122 F++ AR++GI++ +R++ P A S+ +R++D+ +V QP + + +P+ +L Sbjct: 76 FEIAARAAGITHGARSICDTPVLANESLSEISRLYDLCVVPQPDRTKPGHQDPLPESILF 135 Query: 123 QAGKPVLYLPSVIHGSFSARRIGICWDGSRLAARALHDAMPLLREADALTIIAMTDAHKV 182 +GKP+L +P + G R+ ICWDG R AARA+HDAMP LR A + ++A+ + + Sbjct: 136 NSGKPLLMVPYIHSGPMRLDRMLICWDGGRQAARAVHDAMPFLRRAKTIDVLAVNEDEEE 195 Query: 183 PAESSADHLGRYLERSGLPAKIVSLPA-PQSVHRALLSLVADESLDLLVMGGYVRSRLQE 241 +++ D L +L R L A + P ++H +LSL AD D+LVMGGY SRL+E Sbjct: 196 VGQATTDALLAHLLRHDLAATAHHFTSPPTNIHNTILSLAADIGADMLVMGGYGHSRLRE 255 Query: 242 RLLGGISGNLLRANVIPVLMSH 263 +LGG++ + + +P L+SH Sbjct: 256 FILGGVTRGIFKTLTLPALISH 277