BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0182.0016.p         (72 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB55896.1| FixS [Bradyrhizobium elkanii]                         143   7e-33
ref|NP_769410.1| FixS protein [Bradyrhizobium japonicum USDA 110...    76   2e-12
ref|YP_529906.1| cytochrome oxidase maturation protein, cbb3-typ...    75   3e-12
ref|YP_765308.1| putative fixS protein [Rhizobium leguminosarum ...    72   3e-11
ref|YP_770489.1| putative component of cation pump [Rhizobium le...    72   3e-11

>dbj|BAB55896.1| FixS [Bradyrhizobium elkanii]
          Length = 72

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/72 (98%), Positives = 71/72 (98%)

Query: 1  MEVLIYLVPLALSLGFLGRLGFLWSLKSGQYDDLDGAAWRAIADEEPDQPPVPVQIVPTD 60
          MEVLIYLVPLALSLGFLG LGFLWSLKSGQYDDLDGAAWRAIADEEPDQPPVPVQIVPTD
Sbjct: 1  MEVLIYLVPLALSLGFLGLLGFLWSLKSGQYDDLDGAAWRAIADEEPDQPPVPVQIVPTD 60

Query: 61 QRICGSGRRREY 72
          QRICGSGRRREY
Sbjct: 61 QRICGSGRRREY 72


>ref|NP_769410.1| FixS protein [Bradyrhizobium japonicum USDA 110]
 emb|CAA64890.1| fixS [Bradyrhizobium japonicum]
 emb|CAA06286.1| FixS protein [Bradyrhizobium japonicum]
 dbj|BAC48035.1| FixS protein [Bradyrhizobium japonicum USDA 110]
          Length = 55

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 42/49 (85%)

Query: 1  MEVLIYLVPLALSLGFLGRLGFLWSLKSGQYDDLDGAAWRAIADEEPDQ 49
          ME+L+ LVPLAL LG  G + FLWSL+SGQYDDLDGAAWRAIAD+EP Q
Sbjct: 1  MEILVILVPLALMLGGAGLVAFLWSLRSGQYDDLDGAAWRAIADDEPPQ 49


>ref|YP_529906.1| cytochrome oxidase maturation protein, cbb3-type
          [Rhodopseudomonas palustris BisB18]
 gb|ABD85587.1| cytochrome oxidase maturation protein, cbb3-type
          [Rhodopseudomonas palustris BisB18]
          Length = 59

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 42/46 (91%)

Query: 1  MEVLIYLVPLALSLGFLGRLGFLWSLKSGQYDDLDGAAWRAIADEE 46
          MEV+++LVPLAL LG +G +GFLWSL+SGQY+DLDGAAWRAI D+E
Sbjct: 1  MEVMVFLVPLALCLGLVGLIGFLWSLRSGQYEDLDGAAWRAIFDDE 46


>ref|YP_765308.1| putative fixS protein [Rhizobium leguminosarum bv. viciae 3841]
 emb|CAK03721.1| putative fixS protein [Rhizobium leguminosarum bv. viciae 3841]
          Length = 52

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 41/49 (83%)

Query: 1  MEVLIYLVPLALSLGFLGRLGFLWSLKSGQYDDLDGAAWRAIADEEPDQ 49
          M +LIYL+P+AL +G +G L FLWSLKSGQYDDL GAAWR +A++E DQ
Sbjct: 1  MNMLIYLIPIALLMGGIGLLAFLWSLKSGQYDDLQGAAWRILAEDETDQ 49


>ref|YP_770489.1| putative component of cation pump [Rhizobium leguminosarum bv.
          viciae 3841]
 ref|YP_002973132.1| cytochrome oxidase maturation protein, cbb3-type [Rhizobium
          leguminosarum bv. trifolii WSM1325]
 emb|CAA04808.1| FixS protein [Rhizobium leguminosarum]
 emb|CAK10436.1| putative component of cation pump [Rhizobium leguminosarum bv.
          viciae 3841]
 gb|ACS59171.1| cytochrome oxidase maturation protein, cbb3-type [Rhizobium
          leguminosarum bv. trifolii WSM1325]
          Length = 52

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 41/49 (83%)

Query: 1  MEVLIYLVPLALSLGFLGRLGFLWSLKSGQYDDLDGAAWRAIADEEPDQ 49
          M +LIYL+P+AL +G +G L FLWSLKSGQYDDL GAAWR +A++E DQ
Sbjct: 1  MNMLIYLIPIALLMGGIGLLAFLWSLKSGQYDDLQGAAWRILAEDETDQ 49