BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0182.0014.p         (157 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771624.1| transcriptional regulator [Bradyrhizobium japon...   151   3e-35
ref|YP_001240632.1| hypothetical protein BBta_4699 [Bradyrhizobi...   125   2e-27
ref|YP_001220441.1| MarR family transcriptional regulator [Brady...   124   4e-27
ref|ZP_08630361.1| transcriptional regulator, MarR family [Brady...   115   2e-24
ref|NP_945892.1| MarR family transcriptional regulator [Rhodopse...   110   6e-23

>ref|NP_771624.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50249.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 185

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 99/135 (73%), Gaps = 1/135 (0%)

Query: 2   WEIRSISAWLEELARSRADVLGITGPQWMILMAVAYLGKENGVPVNMVSKLMHVDPSFVT 61
           WEI SI+ +LEEL +  A  LGI+GPQW+ILMA++ L K++GVPVN+VSKL+HVDPSFVT
Sbjct: 42  WEISSINMYLEELRQFWARTLGISGPQWLILMAISDLDKDDGVPVNVVSKLLHVDPSFVT 101

Query: 62  THSKLLEKNGFLRRKHCASDARVVQMTLTAKTRKRLASLAGQ-EALDELASDEFGVNGSS 120
           T SKLLEK G LRR+    DARVV+++L  KT+K +ASL  Q + + E    EF  N  +
Sbjct: 102 TQSKLLEKKGLLRRRPSPIDARVVRLSLVDKTQKHIASLNEQYKTIREFVFQEFDENELT 161

Query: 121 EFIAKLAAVRRRLEK 135
           EF  KLA ++ RLEK
Sbjct: 162 EFTTKLATLKNRLEK 176


>ref|YP_001240632.1| hypothetical protein BBta_4699 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36726.1| transcriptional regulator, MarR family [Bradyrhizobium sp. BTAi1]
          Length = 160

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/134 (50%), Positives = 88/134 (65%), Gaps = 1/134 (0%)

Query: 3   EIRSISAWLEELARSRADVLGITGPQWMILMAVAYLGKENGVPVNMVSKLMHVDPSFVTT 62
           EI +I+  LEEL    A  +GI+GPQWMILMA++ L +  GV VN  +K +HVDPSFVTT
Sbjct: 18  EIATINVHLEELRYFWAKRIGISGPQWMILMAISELDQGEGVAVNAAAKRLHVDPSFVTT 77

Query: 63  HSKLLEKNGFLRRKHCASDARVVQMTLTAKTRKRLASLAGQEA-LDELASDEFGVNGSSE 121
            SKLLEK GF+ RK    DARVV+M+LTAKT +  + L   +A +     +EF  +  S 
Sbjct: 78  QSKLLEKKGFVHRKPAPEDARVVRMSLTAKTSEHFSELETHQAQIFGFIFEEFDASELST 137

Query: 122 FIAKLAAVRRRLEK 135
           F  KLAA++ R EK
Sbjct: 138 FTDKLAALKERFEK 151


>ref|YP_001220441.1| MarR family transcriptional regulator [Bradyrhizobium sp. BTAi1]
 gb|ABQ39769.1| putative Transcriptional regulatory protein, MarR family
           [Bradyrhizobium sp. BTAi1]
          Length = 168

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/135 (48%), Positives = 92/135 (68%), Gaps = 1/135 (0%)

Query: 2   WEIRSISAWLEELARSRADVLGITGPQWMILMAVAYLGKENGVPVNMVSKLMHVDPSFVT 61
           WEI  I+ +L +L +  A  L I+GPQWMIL+A++ L + +GVPVN VSK++ VD SFVT
Sbjct: 25  WEIVHINIYLMKLCQFWAKALNISGPQWMILLAISDLDEGDGVPVNAVSKMLQVDSSFVT 84

Query: 62  THSKLLEKNGFLRRKHCASDARVVQMTLTAKTRKRLASLAG-QEALDELASDEFGVNGSS 120
           T SK LEK+G L R    +DARVV+M+LT ++   L+ LA  QEA+  LA + FG +  +
Sbjct: 85  TQSKRLEKSGLLHRNSSPTDARVVRMSLTDQSHDHLSRLAARQEAIGALAFEVFGSDELA 144

Query: 121 EFIAKLAAVRRRLEK 135
           EF  KL+ ++ RL K
Sbjct: 145 EFFEKLSNLKSRLGK 159


>ref|ZP_08630361.1| transcriptional regulator, MarR family [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP06740.1| transcriptional regulator, MarR family [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 156

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 86/136 (63%), Gaps = 1/136 (0%)

Query: 1   MWEIRSISAWLEELARSRADVLGITGPQWMILMAVAYLGKENGVPVNMVSKLMHVDPSFV 60
           +W++ SI+  LEE+  + A +L IT PQW+ILMAV  L +  G+ V  VS  +HVDPSFV
Sbjct: 12  IWDVISINTHLEEIRSNWARMLDITCPQWLILMAVNDLDQGKGISVREVSTKLHVDPSFV 71

Query: 61  TTHSKLLEKNGFLRRKHCASDARVVQMTLTAKTRKRLASLAGQEAL-DELASDEFGVNGS 119
           TT +K LEK+GF+RR     DARVV M+LT K  K++A+L  Q+ + D L   +F     
Sbjct: 72  TTQTKSLEKHGFMRRVASKEDARVVLMSLTEKAHKQIANLYSQQVVADNLVFSDFSTQTF 131

Query: 120 SEFIAKLAAVRRRLEK 135
            +   KL+ ++ RL K
Sbjct: 132 RDLTDKLSTLKERLAK 147


>ref|NP_945892.1| MarR family transcriptional regulator [Rhodopseudomonas palustris
           CGA009]
 emb|CAE25983.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris
           CGA009]
          Length = 177

 Score =  110 bits (276), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 93/142 (65%), Gaps = 1/142 (0%)

Query: 4   IRSISAWLEELARSRADVLGITGPQWMILMAVAYLGKENGVPVNMVSKLMHVDPSFVTTH 63
           + S++ +L+E+ + RA  LGI+GPQ+ +LMAV  L + +GV +  V+K +HVDPSF+TT 
Sbjct: 36  VASVTVFLDEIRQFRAKSLGISGPQFALLMAVMDLEQGDGVSIRHVAKAVHVDPSFITTQ 95

Query: 64  SKLLEKNGFLRRKHCASDARVVQMTLTAKTRKRLASLAGQE-ALDELASDEFGVNGSSEF 122
           SKLLEK G +RR+  + DARVV+++L+ K  K++A+LA  E  L+    ++       + 
Sbjct: 96  SKLLEKKGLVRRQVDSHDARVVKLSLSDKAYKQIAALATDERDLNSFIFEDISGEALEQL 155

Query: 123 IAKLAAVRRRLEKVYRESGSGL 144
            ++L  ++ RLEK   +  SGL
Sbjct: 156 TSQLGDLQNRLEKATVKLASGL 177