BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0181.0002.p         (161 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001203602.1| chemotaxis protein CheW [Bradyrhizobium sp. ...   261   2e-68
ref|NP_768833.1| purine-binding chemotaxis protein [Bradyrhizobi...   261   4e-68
ref|YP_001236712.1| CheW protein [Bradyrhizobium sp. BTAi1] >gi|...   259   1e-67
ref|YP_001242372.1| CheW protein [Bradyrhizobium sp. BTAi1] >gi|...   259   1e-67
ref|YP_001208803.1| chemotaxis protein CheW [Bradyrhizobium sp. ...   259   1e-67

>ref|YP_001203602.1| chemotaxis protein CheW [Bradyrhizobium sp. ORS 278]
 emb|CAL75365.1| Chemotaxis protein cheW [Bradyrhizobium sp. ORS 278]
          Length = 156

 Score =  261 bits (668), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/149 (87%), Positives = 143/149 (95%)

Query: 1   MTSKTETSEGAMAEYVTAVIGGQLFGLPISRVQDVFMPERLTRVPLASSEIAGVLNLRGR 60
           M+SK ET+EGA+ EYVTA+IGGQLFGLPISRVQDVFMPER+TRVPL+S+EIAGVLNLRGR
Sbjct: 1   MSSKIETTEGAVVEYVTAMIGGQLFGLPISRVQDVFMPERVTRVPLSSAEIAGVLNLRGR 60

Query: 61  IVTVVDMRARLGLPKADDGQLPMAVGVDQRGESYGLLIDQIGEVLRLPDDSREDNPVNLD 120
           IVTVVDMRARLGL KADDG+ PMAVGVD RGESYGLLIDQIGEVLRLP++SRE+NPVNLD
Sbjct: 61  IVTVVDMRARLGLAKADDGKPPMAVGVDLRGESYGLLIDQIGEVLRLPEESREENPVNLD 120

Query: 121 PRMAKLAGGVARLDGQLMVVLDVDRVLEL 149
           PRMAKLAGGV RLDGQLMV+LDVDRVLEL
Sbjct: 121 PRMAKLAGGVHRLDGQLMVILDVDRVLEL 149


>ref|NP_768833.1| purine-binding chemotaxis protein [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC47458.1| cheW [Bradyrhizobium japonicum USDA 110]
          Length = 156

 Score =  261 bits (666), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 129/152 (84%), Positives = 144/152 (94%)

Query: 1   MTSKTETSEGAMAEYVTAVIGGQLFGLPISRVQDVFMPERLTRVPLASSEIAGVLNLRGR 60
           M +KT+++EGAM EYVTA+IGGQLFGLPISRVQDVFMPER+TRVPL+S EIAGVLNLRGR
Sbjct: 1   MANKTQSTEGAMVEYVTAMIGGQLFGLPISRVQDVFMPERVTRVPLSSREIAGVLNLRGR 60

Query: 61  IVTVVDMRARLGLPKADDGQLPMAVGVDQRGESYGLLIDQIGEVLRLPDDSREDNPVNLD 120
           IVTVVDMRARLGLP+ +DG++PMAVGVD RGESYGLLIDQIGEVLRLP+D +E+NPVNLD
Sbjct: 61  IVTVVDMRARLGLPRPEDGKVPMAVGVDLRGESYGLLIDQIGEVLRLPEDGKEENPVNLD 120

Query: 121 PRMAKLAGGVARLDGQLMVVLDVDRVLELVPK 152
           PRMAKLAGGV RLDGQLMVVLDVDRVLEL P+
Sbjct: 121 PRMAKLAGGVHRLDGQLMVVLDVDRVLELAPE 152


>ref|YP_001236712.1| CheW protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ32806.1| CheW protein [Bradyrhizobium sp. BTAi1]
          Length = 157

 Score =  259 bits (662), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 129/153 (84%), Positives = 143/153 (93%)

Query: 1   MTSKTETSEGAMAEYVTAVIGGQLFGLPISRVQDVFMPERLTRVPLASSEIAGVLNLRGR 60
           M+SK E ++GA +E+VTAVIGGQLFGLPISRVQDVFMPER+TRVPL+S+EIAGVLNLRGR
Sbjct: 1   MSSKIEATDGAASEFVTAVIGGQLFGLPISRVQDVFMPERVTRVPLSSAEIAGVLNLRGR 60

Query: 61  IVTVVDMRARLGLPKADDGQLPMAVGVDQRGESYGLLIDQIGEVLRLPDDSREDNPVNLD 120
           IVTV+DMRARLGL +ADDG+ PMAVGVD RGESYGLLIDQIGEVLRLP+ SRE+NPVNLD
Sbjct: 61  IVTVIDMRARLGLARADDGKPPMAVGVDLRGESYGLLIDQIGEVLRLPEASREENPVNLD 120

Query: 121 PRMAKLAGGVARLDGQLMVVLDVDRVLELVPKT 153
           PRMAK AGGV RLDGQLMVVLDVDRVLEL+PK 
Sbjct: 121 PRMAKFAGGVHRLDGQLMVVLDVDRVLELLPKA 153


>ref|YP_001242372.1| CheW protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ38466.1| CheW protein [Bradyrhizobium sp. BTAi1]
          Length = 157

 Score =  259 bits (661), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 130/148 (87%), Positives = 142/148 (95%)

Query: 2   TSKTETSEGAMAEYVTAVIGGQLFGLPISRVQDVFMPERLTRVPLASSEIAGVLNLRGRI 61
           +SK ET++GA+AEYVTAVIGGQLFGLPISRVQDVFMPERLTRVPL+S EIAGVLNLRGRI
Sbjct: 3   SSKIETTDGAVAEYVTAVIGGQLFGLPISRVQDVFMPERLTRVPLSSVEIAGVLNLRGRI 62

Query: 62  VTVVDMRARLGLPKADDGQLPMAVGVDQRGESYGLLIDQIGEVLRLPDDSREDNPVNLDP 121
           VTV+DMRARLGL +ADDG+ PMAVGVD RGESYGLLIDQIGEVLRLP++SRE+NPVNLDP
Sbjct: 63  VTVIDMRARLGLARADDGKPPMAVGVDLRGESYGLLIDQIGEVLRLPEESREENPVNLDP 122

Query: 122 RMAKLAGGVARLDGQLMVVLDVDRVLEL 149
           RMAKLAGGV RLDGQLMV+LDVDRVLEL
Sbjct: 123 RMAKLAGGVHRLDGQLMVILDVDRVLEL 150


>ref|YP_001208803.1| chemotaxis protein CheW [Bradyrhizobium sp. ORS 278]
 emb|CAL80588.1| Chemotaxis protein cheW [Bradyrhizobium sp. ORS 278]
          Length = 157

 Score =  259 bits (661), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 129/153 (84%), Positives = 143/153 (93%)

Query: 1   MTSKTETSEGAMAEYVTAVIGGQLFGLPISRVQDVFMPERLTRVPLASSEIAGVLNLRGR 60
           M+SK ET++GA +E+VTA+IGGQLFGLPISRVQDVFMPER+TRVPL+S+EIAGVLNLRGR
Sbjct: 1   MSSKIETTDGAASEFVTAMIGGQLFGLPISRVQDVFMPERVTRVPLSSAEIAGVLNLRGR 60

Query: 61  IVTVVDMRARLGLPKADDGQLPMAVGVDQRGESYGLLIDQIGEVLRLPDDSREDNPVNLD 120
           IVTVVDMRARLGL KA+DG+ PMAVGVD RGESYGLLIDQIGEVLRLP+  REDNPVNLD
Sbjct: 61  IVTVVDMRARLGLAKAEDGKPPMAVGVDLRGESYGLLIDQIGEVLRLPEAGREDNPVNLD 120

Query: 121 PRMAKLAGGVARLDGQLMVVLDVDRVLELVPKT 153
           PRMAK AGGV RLDGQLMV+LDVDRVLEL+PK 
Sbjct: 121 PRMAKFAGGVHRLDGQLMVILDVDRVLELLPKA 153