BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0180.0088.p         (107 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_768159.1| thiamine-phosphate pyrophosphorylase [Bradyrhiz...   149   2e-34
ref|ZP_08627451.1| thiamin-phosphate pyrophosphorylase [Bradyrhi...   144   4e-33
ref|YP_534615.1| thiamine monophosphate synthase [Rhodopseudomon...   138   3e-31
ref|YP_578724.1| thiamine monophosphate synthase [Nitrobacter ha...   137   5e-31
ref|YP_319343.1| thiamine monophosphate synthase [Nitrobacter wi...   133   1e-29

>ref|NP_768159.1| thiamine-phosphate pyrophosphorylase [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC46784.1| bll1519 [Bradyrhizobium japonicum USDA 110]
          Length = 186

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/104 (70%), Positives = 82/104 (78%)

Query: 1   MAAGEAGADYVLFGEPDANGQRPSREAIAERLEWWDELFEPPCVGFATSREEAEAFAAAG 60
           M AGE GADY+LFGEPDA GQRPS EAIAERL+WW ELFEPPCVGFATS EEA  FAA+G
Sbjct: 81  MDAGEIGADYLLFGEPDAKGQRPSSEAIAERLDWWAELFEPPCVGFATSLEEAYDFAASG 140

Query: 61  ADFVLVGDFIWSDPRGAKAALVEIGDAIARAHAGTFGKAKADGK 104
           ADFVLVG+F+W+DPRGAKAAL+E    I +AHA         G+
Sbjct: 141 ADFVLVGEFVWADPRGAKAALIEADATIKKAHAAALASQNPAGE 184


>ref|ZP_08627451.1| thiamin-phosphate pyrophosphorylase [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP10077.1| thiamin-phosphate pyrophosphorylase [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 226

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 82/104 (78%)

Query: 1   MAAGEAGADYVLFGEPDANGQRPSREAIAERLEWWDELFEPPCVGFATSREEAEAFAAAG 60
           M AGEAGADYVLFGEPDANG+RPS +AI ERL+WW ELFEPPCV FAT+ EEA  FAAAG
Sbjct: 123 MVAGEAGADYVLFGEPDANGERPSADAICERLDWWAELFEPPCVAFATAVEEAGLFAAAG 182

Query: 61  ADFVLVGDFIWSDPRGAKAALVEIGDAIARAHAGTFGKAKADGK 104
           ADFVL+G+FIW D RGAK AL+E G A+AR    +  +A   G+
Sbjct: 183 ADFVLLGNFIWQDSRGAKTALIEAGKAVARGFEKSVAQAAVTGE 226


>ref|YP_534615.1| thiamine monophosphate synthase [Rhodopseudomonas palustris BisB18]
 gb|ABD90296.1| thiamine monophosphate synthase [Rhodopseudomonas palustris BisB18]
          Length = 230

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/96 (69%), Positives = 78/96 (81%)

Query: 1   MAAGEAGADYVLFGEPDANGQRPSREAIAERLEWWDELFEPPCVGFATSREEAEAFAAAG 60
           M AGEAGADYVLFGEPDA+GQRP+++AIAERL+WW ELFEPPCVG+A +  EA+ FAAAG
Sbjct: 123 MLAGEAGADYVLFGEPDADGQRPAQDAIAERLQWWAELFEPPCVGYAATLAEAQDFAAAG 182

Query: 61  ADFVLVGDFIWSDPRGAKAALVEIGDAIARAHAGTF 96
           ADFVLVGD IW DPRGA AAL +   AIA+ +    
Sbjct: 183 ADFVLVGDMIWDDPRGADAALGDARAAIAQGYQSLL 218


>ref|YP_578724.1| thiamine monophosphate synthase [Nitrobacter hamburgensis X14]
 gb|ABE64264.1| thiamine monophosphate synthase [Nitrobacter hamburgensis X14]
          Length = 233

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/92 (71%), Positives = 76/92 (82%)

Query: 1   MAAGEAGADYVLFGEPDANGQRPSREAIAERLEWWDELFEPPCVGFATSREEAEAFAAAG 60
           M AGEAGADYVLFGEPD  G+RPS +AIAERL WW ELFEPPCVG+ATS +EA  FAA+G
Sbjct: 123 MIAGEAGADYVLFGEPDEAGERPSADAIAERLAWWAELFEPPCVGYATSIDEARTFAASG 182

Query: 61  ADFVLVGDFIWSDPRGAKAALVEIGDAIARAH 92
           ADF+L GDFIW+DPRGA AA ++  DAI + H
Sbjct: 183 ADFILAGDFIWNDPRGAAAAAMDTIDAIRQGH 214


>ref|YP_319343.1| thiamine monophosphate synthase [Nitrobacter winogradskyi Nb-255]
 gb|ABA05991.1| thiamine monophosphate synthase [Nitrobacter winogradskyi Nb-255]
          Length = 233

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/102 (63%), Positives = 73/102 (71%)

Query: 1   MAAGEAGADYVLFGEPDANGQRPSREAIAERLEWWDELFEPPCVGFATSREEAEAFAAAG 60
           M AGEAGADYVLFGEPD  G RPS EAIAERL WW ELFEPPCV  A + +EA  FAA+G
Sbjct: 123 MVAGEAGADYVLFGEPDETGDRPSAEAIAERLTWWAELFEPPCVAHAMNIDEARLFAASG 182

Query: 61  ADFVLVGDFIWSDPRGAKAALVEIGDAIARAHAGTFGKAKAD 102
           ADF+LV D +W+D RGA  AL +I  AIAR H    G  + D
Sbjct: 183 ADFILVDDIVWTDTRGAALALADIATAIARGHESQGGAERTD 224