BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0180.0081.p (457 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242716.1| transketolase [Bradyrhizobium sp. BTAi1] >gi... 523 e-146 ref|YP_001203274.1| transketolase [Bradyrhizobium sp. ORS 278] >... 518 e-145 ref|NP_768164.1| transketolase [Bradyrhizobium japonicum USDA 11... 501 e-139 ref|ZP_08627446.1| transketolase [Bradyrhizobiaceae bacterium SG... 479 e-133 ref|ZP_07027355.1| transketolase [Afipia sp. 1NLS2] >gi|29859090... 463 e-128 >ref|YP_001242716.1| transketolase [Bradyrhizobium sp. BTAi1] gb|ABQ38810.1| transketolase [Bradyrhizobium sp. BTAi1] Length = 661 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 259/300 (86%), Positives = 283/300 (94%) Query: 1 MTQVDHTRMANAIRGLAMDAVEKANSGHPGLPMGAADIATVLFTKFLKFDAADTAWPDRD 60 MTQVDH+RMANAIR LAMDAVEKA SGHPGLPMGAAD+ATVLFT+ LK+DAA AWPDRD Sbjct: 1 MTQVDHSRMANAIRALAMDAVEKAKSGHPGLPMGAADVATVLFTRVLKYDAAAPAWPDRD 60 Query: 61 RFVLSAGHGSMLLYSLLYLTGNKDMTLDQLKHFRQLGSLTPGHPENFHTKGIETTTGPLG 120 RFVLSAGHGSMLLY+LLYLTGN++MTLDQ+K FRQ+ SLTPGHPENF TKGIETTTGPLG Sbjct: 61 RFVLSAGHGSMLLYALLYLTGNEEMTLDQIKRFRQVDSLTPGHPENFRTKGIETTTGPLG 120 Query: 121 QGIATAVGMAVAEKMLAAEFGKKIVNHHTYVLASDGDLMEGISQEAIALAGVWRLNKMIV 180 QGI+TAVGMA+AEKML AE+GKKIV+HHTYVLASDGDLMEGISQEAIA+AG W+LNK+IV Sbjct: 121 QGISTAVGMALAEKMLQAEYGKKIVDHHTYVLASDGDLMEGISQEAIAMAGHWKLNKLIV 180 Query: 181 LYDDNGISIDGPTSISDSVDQVKRFKSAGWAAELIDGHDPQAIAAAITRAQKSNKPSMIA 240 L+DDNGISIDGP SI+DSVDQVKRFKSAGWAAELIDGHDP+AIAAAI RAQKS++PS+IA Sbjct: 181 LWDDNGISIDGPLSIADSVDQVKRFKSAGWAAELIDGHDPEAIAAAIARAQKSSRPSLIA 240 Query: 241 CKTTIGYGAPHKAGTAKVHGEALGADELKAAKEKLGISLEPFSVPDDVLNAWREAGARGA 300 CKTTIGYGAP KAGT+KVHGEALG +ELK AKEKLGISLEPFSVPDDVL AWREAG RGA Sbjct: 241 CKTTIGYGAPTKAGTSKVHGEALGPEELKGAKEKLGISLEPFSVPDDVLAAWREAGRRGA 300 >ref|YP_001203274.1| transketolase [Bradyrhizobium sp. ORS 278] emb|CAL75037.1| Transketolase (TK) [Bradyrhizobium sp. ORS 278] Length = 661 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 257/300 (85%), Positives = 282/300 (94%) Query: 1 MTQVDHTRMANAIRGLAMDAVEKANSGHPGLPMGAADIATVLFTKFLKFDAADTAWPDRD 60 MTQVDH+RMANAIR LAMDAVEKA SGHPGLPMGAAD+ATVLFT+ LK+DAA AWPDRD Sbjct: 1 MTQVDHSRMANAIRALAMDAVEKAKSGHPGLPMGAADVATVLFTRVLKYDAAVPAWPDRD 60 Query: 61 RFVLSAGHGSMLLYSLLYLTGNKDMTLDQLKHFRQLGSLTPGHPENFHTKGIETTTGPLG 120 RFVLSAGHGSMLLY+LLYLTGN++MTLDQ+K FRQ+ SLTPGHPENF TKGIETTTGPLG Sbjct: 61 RFVLSAGHGSMLLYALLYLTGNEEMTLDQIKRFRQVDSLTPGHPENFRTKGIETTTGPLG 120 Query: 121 QGIATAVGMAVAEKMLAAEFGKKIVNHHTYVLASDGDLMEGISQEAIALAGVWRLNKMIV 180 QGI+TAVGMA+AEKML AE+GKKIV+HHTYVLASDGDLMEGISQEAIA+AG W+LNK+IV Sbjct: 121 QGISTAVGMALAEKMLQAEYGKKIVDHHTYVLASDGDLMEGISQEAIAMAGHWKLNKLIV 180 Query: 181 LYDDNGISIDGPTSISDSVDQVKRFKSAGWAAELIDGHDPQAIAAAITRAQKSNKPSMIA 240 L+DDNGISIDGP SI+DSVDQVKRFK+ GWAAELIDGHDP+AIAAAI RAQKS++PS+IA Sbjct: 181 LWDDNGISIDGPLSIADSVDQVKRFKACGWAAELIDGHDPEAIAAAIARAQKSSRPSLIA 240 Query: 241 CKTTIGYGAPHKAGTAKVHGEALGADELKAAKEKLGISLEPFSVPDDVLNAWREAGARGA 300 CKTTIGYGAP KAGT+KVHGEALGA+ELK AKEKLGIS EPFSVPDDVL AWREAG RGA Sbjct: 241 CKTTIGYGAPTKAGTSKVHGEALGAEELKGAKEKLGISQEPFSVPDDVLAAWREAGRRGA 300 >ref|NP_768164.1| transketolase [Bradyrhizobium japonicum USDA 110] dbj|BAC46789.1| transketolase [Bradyrhizobium japonicum USDA 110] Length = 671 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 259/291 (89%), Positives = 278/291 (95%) Query: 2 TQVDHTRMANAIRGLAMDAVEKANSGHPGLPMGAADIATVLFTKFLKFDAADTAWPDRDR 61 TQVDH+RMANAIRGL+MDAVEKA SGHPGLPMGAADIATVLFT+FLKFDAA AWPDRDR Sbjct: 12 TQVDHSRMANAIRGLSMDAVEKAKSGHPGLPMGAADIATVLFTQFLKFDAAAPAWPDRDR 71 Query: 62 FVLSAGHGSMLLYSLLYLTGNKDMTLDQLKHFRQLGSLTPGHPENFHTKGIETTTGPLGQ 121 FVLSAGHGSMLLYSLLYLTGN DMTLDQLK FRQLG LTPGHPENFHTKGIETTTGPLGQ Sbjct: 72 FVLSAGHGSMLLYSLLYLTGNADMTLDQLKQFRQLGGLTPGHPENFHTKGIETTTGPLGQ 131 Query: 122 GIATAVGMAVAEKMLAAEFGKKIVNHHTYVLASDGDLMEGISQEAIALAGVWRLNKMIVL 181 GI+TAVGMA+AEKMLAAEFGKKIV+HHT+VLASDGDLMEG+SQEAIA+AG W+LNK+IVL Sbjct: 132 GISTAVGMALAEKMLAAEFGKKIVDHHTFVLASDGDLMEGVSQEAIAMAGHWKLNKLIVL 191 Query: 182 YDDNGISIDGPTSISDSVDQVKRFKSAGWAAELIDGHDPQAIAAAITRAQKSNKPSMIAC 241 YDDNGISIDGPTSI+DSVDQVKRFKSAGWAAE IDGHD AI AAITRA+KSNKP++IAC Sbjct: 192 YDDNGISIDGPTSIADSVDQVKRFKSAGWAAEKIDGHDQAAITAAITRAKKSNKPTLIAC 251 Query: 242 KTTIGYGAPHKAGTAKVHGEALGADELKAAKEKLGISLEPFSVPDDVLNAW 292 +TTIG+GAPHKAGT+KVHGEALGA+ELKAAKE LGISLEPFSVPDDVL AW Sbjct: 252 RTTIGFGAPHKAGTSKVHGEALGAEELKAAKENLGISLEPFSVPDDVLKAW 302 >ref|ZP_08627446.1| transketolase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10072.1| transketolase [Bradyrhizobiaceae bacterium SG-6C] Length = 661 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 230/298 (77%), Positives = 262/298 (87%) Query: 2 TQVDHTRMANAIRGLAMDAVEKANSGHPGLPMGAADIATVLFTKFLKFDAADTAWPDRDR 61 +VD +RMANAIR LAMDAVEKA SGHPGLPMGAAD+ATVLFT+FLKFDA+D WPDRDR Sbjct: 3 VRVDPSRMANAIRALAMDAVEKAKSGHPGLPMGAADVATVLFTQFLKFDASDPTWPDRDR 62 Query: 62 FVLSAGHGSMLLYSLLYLTGNKDMTLDQLKHFRQLGSLTPGHPENFHTKGIETTTGPLGQ 121 FVLSAGHGSMLLY+LLYLTGN MT+DQ+K+FRQLGSLTPGHPENF T GIETTTGPLGQ Sbjct: 63 FVLSAGHGSMLLYALLYLTGNPTMTIDQIKNFRQLGSLTPGHPENFVTPGIETTTGPLGQ 122 Query: 122 GIATAVGMAVAEKMLAAEFGKKIVNHHTYVLASDGDLMEGISQEAIALAGVWRLNKMIVL 181 GIATAVGMA+AE+ +AAEFG +V+HHTYVLASDGDLMEGISQEAIA AG RLNK+IVL Sbjct: 123 GIATAVGMALAERHMAAEFGGDVVDHHTYVLASDGDLMEGISQEAIAFAGHLRLNKLIVL 182 Query: 182 YDDNGISIDGPTSISDSVDQVKRFKSAGWAAELIDGHDPQAIAAAITRAQKSNKPSMIAC 241 +DDNGISIDG S+SDSVDQVKRF+SAGWAAE IDGHDP+AIA A+TRAQ S++PS+IAC Sbjct: 183 FDDNGISIDGAISLSDSVDQVKRFESAGWAAERIDGHDPKAIADALTRAQTSDRPSLIAC 242 Query: 242 KTTIGYGAPHKAGTAKVHGEALGADELKAAKEKLGISLEPFSVPDDVLNAWREAGARG 299 KTTIG+GAP+KAG+ K HG LGADE+ A++ L PF VP D+L+AWR AG+RG Sbjct: 243 KTTIGFGAPNKAGSEKSHGSPLGADEIAGARKNLKWDAAPFEVPQDILDAWRAAGSRG 300 >ref|ZP_07027355.1| transketolase [Afipia sp. 1NLS2] gb|EFI51111.1| transketolase [Afipia sp. 1NLS2] Length = 668 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 226/298 (75%), Positives = 258/298 (86%) Query: 3 QVDHTRMANAIRGLAMDAVEKANSGHPGLPMGAADIATVLFTKFLKFDAADTAWPDRDRF 62 +VD +RMANAIR LAMDAVEKANSGHPGLPMGAADIATVLFT+FLKFDA D W DRDRF Sbjct: 9 RVDPSRMANAIRALAMDAVEKANSGHPGLPMGAADIATVLFTQFLKFDARDPKWADRDRF 68 Query: 63 VLSAGHGSMLLYSLLYLTGNKDMTLDQLKHFRQLGSLTPGHPENFHTKGIETTTGPLGQG 122 VLSAGHGSMLLY+LLYLTGN+ MT+DQ+K+FRQLGSLTPGHPENF T GIE TTGPLGQG Sbjct: 69 VLSAGHGSMLLYALLYLTGNEAMTIDQIKNFRQLGSLTPGHPENFITPGIEMTTGPLGQG 128 Query: 123 IATAVGMAVAEKMLAAEFGKKIVNHHTYVLASDGDLMEGISQEAIALAGVWRLNKMIVLY 182 I+TAVGMA+AE+ LAAEFG IV+H TYVLASDGDLMEGISQEAIALAG +LNKMIVL+ Sbjct: 129 ISTAVGMALAERHLAAEFGGDIVDHTTYVLASDGDLMEGISQEAIALAGHLKLNKMIVLF 188 Query: 183 DDNGISIDGPTSISDSVDQVKRFKSAGWAAELIDGHDPQAIAAAITRAQKSNKPSMIACK 242 DDNGISIDG S+SDSVDQVKRF++AGWAAE IDGH+ AI AI RAQKS++P++IACK Sbjct: 189 DDNGISIDGAISLSDSVDQVKRFEAAGWAAERIDGHNHDAIVDAIARAQKSDRPTLIACK 248 Query: 243 TTIGYGAPHKAGTAKVHGEALGADELKAAKEKLGISLEPFSVPDDVLNAWREAGARGA 300 TTI +GAP KAGT+K HG LGA+E+ A+++L PF +P D+L AWR AG+RGA Sbjct: 249 TTIAFGAPTKAGTSKSHGSPLGAEEIAGARKQLNWDAPPFEIPADILEAWRAAGSRGA 306