BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0180.0073.p (176 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_578711.1| Holliday junction DNA helicase RuvA [Nitrobacte... 310 6e-83 ref|YP_571289.1| Holliday junction DNA helicase RuvA [Rhodopseud... 306 7e-82 ref|NP_768176.1| Holliday junction DNA helicase RuvA [Bradyrhizo... 305 1e-81 ref|ZP_08627437.1| holliday junction DNA helicase RuvA [Bradyrhi... 303 6e-81 ref|ZP_01045382.1| Holliday junction DNA helicase motor protein ... 303 9e-81 >ref|YP_578711.1| Holliday junction DNA helicase RuvA [Nitrobacter hamburgensis X14] gb|ABE64251.1| Holliday junction DNA helicase subunit RuvA [Nitrobacter hamburgensis X14] Length = 206 Score = 310 bits (794), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 151/167 (90%), Positives = 160/167 (95%) Query: 1 MIGKLKGLIDSYGEDYVILDVGGVGYQVHCAGRTLQALPSPGGAAVLSIETYVREDQIKL 60 MIGKLKG+IDSYGEDYVILDVGGVGYQVHCA RTLQALPSPG AAVLSIETYVREDQIKL Sbjct: 2 MIGKLKGIIDSYGEDYVILDVGGVGYQVHCASRTLQALPSPGAAAVLSIETYVREDQIKL 61 Query: 61 FGFRSDHEREWFRLLQTVQGVGAKVALAVLGTLPPTDLANAIALRDKAAVARTPGVGPKV 120 +GFR+DHEREWFRLLQTVQGVGA+VALAVLGTL P DLANAIALRDKA+VARTPGVGPKV Sbjct: 62 YGFRTDHEREWFRLLQTVQGVGARVALAVLGTLSPADLANAIALRDKASVARTPGVGPKV 121 Query: 121 AERIVSELKDKAPGFADVDPAVVHLSGAIDNNRAPRPVTDAISALVN 167 AERIV+ELKDKAP FA+VDPAVVHL+GAID+ RAPRPV DAISALVN Sbjct: 122 AERIVTELKDKAPAFANVDPAVVHLAGAIDDARAPRPVRDAISALVN 168 >ref|YP_571289.1| Holliday junction DNA helicase RuvA [Rhodopseudomonas palustris BisB5] sp|Q130V1.1|RUVA_RHOPS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gb|ABE41388.1| Holliday junction DNA helicase subunit RuvA [Rhodopseudomonas palustris BisB5] Length = 205 Score = 306 bits (784), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 150/167 (89%), Positives = 156/167 (93%) Query: 1 MIGKLKGLIDSYGEDYVILDVGGVGYQVHCAGRTLQALPSPGGAAVLSIETYVREDQIKL 60 MIGKLKGLIDSYGEDYVILDV GVGYQVHC+ RTLQALPSPG AA LSIETYVREDQIKL Sbjct: 1 MIGKLKGLIDSYGEDYVILDVHGVGYQVHCSSRTLQALPSPGEAATLSIETYVREDQIKL 60 Query: 61 FGFRSDHEREWFRLLQTVQGVGAKVALAVLGTLPPTDLANAIALRDKAAVARTPGVGPKV 120 FGFR+DHEREWFRLLQTVQ VGAKVALAVL TLPP DLANAIALRDKAAVARTPGVGPKV Sbjct: 61 FGFRTDHEREWFRLLQTVQSVGAKVALAVLSTLPPNDLANAIALRDKAAVARTPGVGPKV 120 Query: 121 AERIVSELKDKAPGFADVDPAVVHLSGAIDNNRAPRPVTDAISALVN 167 AERIVSELKDK P ++VDPAVV LSGA+D+NRAPRPVTDAISALVN Sbjct: 121 AERIVSELKDKVPALSNVDPAVVQLSGALDDNRAPRPVTDAISALVN 167 >ref|NP_768176.1| Holliday junction DNA helicase RuvA [Bradyrhizobium japonicum USDA 110] sp|Q89U81.1|RUVA_BRAJA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA dbj|BAC46801.1| holliday junction DNA helicase [Bradyrhizobium japonicum USDA 110] Length = 205 Score = 305 bits (782), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 150/167 (89%), Positives = 159/167 (95%) Query: 1 MIGKLKGLIDSYGEDYVILDVGGVGYQVHCAGRTLQALPSPGGAAVLSIETYVREDQIKL 60 MIGKLKGLIDSYGED+VILDVGGVGYQVHC+ RTLQ LPSPG AAVLSIETYVREDQIKL Sbjct: 1 MIGKLKGLIDSYGEDFVILDVGGVGYQVHCSTRTLQHLPSPGEAAVLSIETYVREDQIKL 60 Query: 61 FGFRSDHEREWFRLLQTVQGVGAKVALAVLGTLPPTDLANAIALRDKAAVARTPGVGPKV 120 FGFR+D EREWFRLLQTVQGVGAKVALAVLGTL P+DLANAIALRDKAAVARTPGVGPKV Sbjct: 61 FGFRTDQEREWFRLLQTVQGVGAKVALAVLGTLAPSDLANAIALRDKAAVARTPGVGPKV 120 Query: 121 AERIVSELKDKAPGFADVDPAVVHLSGAIDNNRAPRPVTDAISALVN 167 AERIV+ELKDKAP FA+VDPAVVHL+GA+D+ RAPRPV DAISALVN Sbjct: 121 AERIVTELKDKAPAFANVDPAVVHLAGAVDDQRAPRPVADAISALVN 167 >ref|ZP_08627437.1| holliday junction DNA helicase RuvA [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10063.1| holliday junction DNA helicase RuvA [Bradyrhizobiaceae bacterium SG-6C] Length = 205 Score = 303 bits (777), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 149/167 (89%), Positives = 155/167 (92%) Query: 1 MIGKLKGLIDSYGEDYVILDVGGVGYQVHCAGRTLQALPSPGGAAVLSIETYVREDQIKL 60 MIGKLKGLIDSYGEDYVILDV GVGYQVHC+ RTLQALP PG AA+LSIETYVREDQIKL Sbjct: 1 MIGKLKGLIDSYGEDYVILDVQGVGYQVHCSARTLQALPQPGEAAMLSIETYVREDQIKL 60 Query: 61 FGFRSDHEREWFRLLQTVQGVGAKVALAVLGTLPPTDLANAIALRDKAAVARTPGVGPKV 120 FGFR+D EREWFRLLQTVQGVGAKVALAVL TLPPTDLANAIALRDKAAVARTPGVGPKV Sbjct: 61 FGFRTDMEREWFRLLQTVQGVGAKVALAVLSTLPPTDLANAIALRDKAAVARTPGVGPKV 120 Query: 121 AERIVSELKDKAPGFADVDPAVVHLSGAIDNNRAPRPVTDAISALVN 167 AERIV+ELKDK P F VDPAVVHLSGA+D+N APRPV DAISALVN Sbjct: 121 AERIVTELKDKTPAFGSVDPAVVHLSGALDDNLAPRPVADAISALVN 167 >ref|ZP_01045382.1| Holliday junction DNA helicase motor protein [Nitrobacter sp. Nb-311A] gb|EAQ36710.1| Holliday junction DNA helicase motor protein [Nitrobacter sp. Nb-311A] Length = 205 Score = 303 bits (775), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 148/167 (88%), Positives = 159/167 (95%) Query: 1 MIGKLKGLIDSYGEDYVILDVGGVGYQVHCAGRTLQALPSPGGAAVLSIETYVREDQIKL 60 MIGKLKG+IDSYGEDYVILDVGGVGYQVHCA RTLQALPSPG AAVLSIETYVREDQIKL Sbjct: 1 MIGKLKGIIDSYGEDYVILDVGGVGYQVHCASRTLQALPSPGEAAVLSIETYVREDQIKL 60 Query: 61 FGFRSDHEREWFRLLQTVQGVGAKVALAVLGTLPPTDLANAIALRDKAAVARTPGVGPKV 120 FGFR+DHEREWFRLLQ+VQGVGA+VALAVLGTL P DLA+A+ALRDKA+VARTPGVGPKV Sbjct: 61 FGFRTDHEREWFRLLQSVQGVGARVALAVLGTLSPADLASAVALRDKASVARTPGVGPKV 120 Query: 121 AERIVSELKDKAPGFADVDPAVVHLSGAIDNNRAPRPVTDAISALVN 167 AERIV+ELKDKAP FA+VDPAVVHL GA+D+ RAP PVTDAISALVN Sbjct: 121 AERIVTELKDKAPSFANVDPAVVHLVGAVDDRRAPGPVTDAISALVN 167