BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0180.0063.p (321 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773812.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium jap... 513 e-143 ref|YP_001242693.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium ... 503 e-140 ref|YP_001203297.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium ... 481 e-134 ref|NP_106146.1| putative 2-hydroxyacid dehydrogenase [Mesorhizo... 318 6e-85 ref|YP_004139295.1| NAD-binding D-isomer specific 2-hydroxyacid ... 317 1e-84 >ref|NP_773812.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC52437.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 321 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 249/321 (77%), Positives = 274/321 (85%) Query: 1 MGKGALALLINGGSENWSSARWKARFDAVCPDRRVVLLPDGALDPAEVHYAAVWKPKPGE 60 M KG LA+LIN +NW RWKARFD+VC RRVVLLPD ALDPAEVHYAAVWKP PG+ Sbjct: 1 MTKGTLAVLINSTQQNWLPERWKARFDSVCGGRRVVLLPDTALDPAEVHYAAVWKPVPGD 60 Query: 61 LAAFKNLRVIFNLGAGVDALTADRSLPDVPLVRVAVSDLTDRMTEYVVLHVLMHHRQELY 120 L +F NLR IFNLGAGVDAL AD+SLPDVPLVRVAV DLT+RMTEYVVLHVLMHHRQELY Sbjct: 61 LGSFPNLRAIFNLGAGVDALMADKSLPDVPLVRVAVPDLTNRMTEYVVLHVLMHHRQELY 120 Query: 121 LRESQRVKRWAPDYQWAASAITVGVMGLGTLGAASAQALRALGFRVVGWSRSEKRIDGIA 180 LR+SQR KRW P YQW ASA+TVGVMGLGTLGA +A LR LGFRV GWSRS + I+G+ Sbjct: 121 LRQSQREKRWEPKYQWPASAVTVGVMGLGTLGADAADVLRRLGFRVAGWSRSPRTIEGVE 180 Query: 181 CYHGADGLDAFLRETNILVCLLPLTPDTRHVLNRDAFAKLNRESPLGAPVIINAGRGGLQ 240 C+HG G+DAFLR T+ILV LLPLTPDT +LNRD F KLNR+SPLGAPV+INAGRGGLQ Sbjct: 181 CFHGTAGIDAFLRATDILVSLLPLTPDTHGILNRDVFTKLNRKSPLGAPVLINAGRGGLQ 240 Query: 241 NEADILRALDDGTLGAASLDVFETEPLPEASPFWSHPKVVLTPHNAADTDADEISKYVAQ 300 NEADIL LDDGTLGAASLDVF EP P+ S FW+HPKV+LTPHNAADTDA+ IS YVA+ Sbjct: 241 NEADILACLDDGTLGAASLDVFVQEPQPKDSRFWTHPKVLLTPHNAADTDAEAISAYVAE 300 Query: 301 QIARFEAGGALENLVDRKRGY 321 QIARFEAGGALEN+VDR RGY Sbjct: 301 QIARFEAGGALENVVDRTRGY 321 >ref|YP_001242693.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ38787.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 321 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 246/321 (76%), Positives = 270/321 (84%) Query: 1 MGKGALALLINGGSENWSSARWKARFDAVCPDRRVVLLPDGALDPAEVHYAAVWKPKPGE 60 M KGALALLI+GG++NWS RWK RFD VC DR VVLLPD LDPAEVHYAAVWKP PGE Sbjct: 1 MSKGALALLIHGGTDNWSPQRWKTRFDDVCGDRPVVLLPDAGLDPAEVHYAAVWKPVPGE 60 Query: 61 LAAFKNLRVIFNLGAGVDALTADRSLPDVPLVRVAVSDLTDRMTEYVVLHVLMHHRQELY 120 LA F NLRVIFNLGAGVDAL AD++LP VPLVRVAV DLT RMTEYVVLHVLMHHRQELY Sbjct: 61 LAGFPNLRVIFNLGAGVDALMADKTLPSVPLVRVAVDDLTARMTEYVVLHVLMHHRQELY 120 Query: 121 LRESQRVKRWAPDYQWAASAITVGVMGLGTLGAASAQALRALGFRVVGWSRSEKRIDGIA 180 LRESQRVKRWAP YQW A+AI VG++GLGTLG +A+ LR +GF+V GWSRSEK++ GI Sbjct: 121 LRESQRVKRWAPKYQWPAAAIGVGILGLGTLGIDAAEVLRRIGFQVAGWSRSEKQVAGIE 180 Query: 181 CYHGADGLDAFLRETNILVCLLPLTPDTRHVLNRDAFAKLNRESPLGAPVIINAGRGGLQ 240 +HG LDAFL T+ILV LLPLT +TR +L+R FAKL R SPLGAP++INAGRGGLQ Sbjct: 181 TFHGGAQLDAFLERTDILVSLLPLTANTRGILDRKMFAKLRRSSPLGAPIMINAGRGGLQ 240 Query: 241 NEADILRALDDGTLGAASLDVFETEPLPEASPFWSHPKVVLTPHNAADTDADEISKYVAQ 300 NEADIL LDDGTLGA SLDVF EPLP SPFW+HPKVVLTPHNAADTDAD IS+YVA+ Sbjct: 241 NEADILACLDDGTLGAVSLDVFGQEPLPADSPFWTHPKVVLTPHNAADTDADAISRYVAE 300 Query: 301 QIARFEAGGALENLVDRKRGY 321 QIA FE GGAL NLVDR RGY Sbjct: 301 QIASFETGGALRNLVDRVRGY 321 >ref|YP_001203297.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL75060.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 347 Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust. Identities = 244/321 (76%), Positives = 271/321 (84%) Query: 1 MGKGALALLINGGSENWSSARWKARFDAVCPDRRVVLLPDGALDPAEVHYAAVWKPKPGE 60 M KGALALLI+GG++NWS RWKARF+ VC DR VVLLPD LDPA+VHYAAVWKP PGE Sbjct: 27 MTKGALALLIHGGTDNWSPQRWKARFNDVCADRPVVLLPDANLDPADVHYAAVWKPVPGE 86 Query: 61 LAAFKNLRVIFNLGAGVDALTADRSLPDVPLVRVAVSDLTDRMTEYVVLHVLMHHRQELY 120 LA F NLRVIFNLGAGVDAL AD++LP VPLVRVAV DLT RMTE+VVLHVLMHHRQELY Sbjct: 87 LAGFPNLRVIFNLGAGVDALMADKTLPGVPLVRVAVDDLTQRMTEWVVLHVLMHHRQELY 146 Query: 121 LRESQRVKRWAPDYQWAASAITVGVMGLGTLGAASAQALRALGFRVVGWSRSEKRIDGIA 180 LRESQRVKRWAP YQW A+AI VG++GLGTLG +A+ L+ +GF+V GWSRSEK+IDGI Sbjct: 147 LRESQRVKRWAPKYQWPAAAINVGILGLGTLGLDAAEVLKRIGFQVAGWSRSEKQIDGIE 206 Query: 181 CYHGADGLDAFLRETNILVCLLPLTPDTRHVLNRDAFAKLNRESPLGAPVIINAGRGGLQ 240 +HGA LDAFL T+ILV LLPLTPDTR +L+R F L R SPLGAP++INAGRGGLQ Sbjct: 207 TFHGAAQLDAFLARTDILVSLLPLTPDTRGILDRKMFTGLRRSSPLGAPIMINAGRGGLQ 266 Query: 241 NEADILRALDDGTLGAASLDVFETEPLPEASPFWSHPKVVLTPHNAADTDADEISKYVAQ 300 +EADIL LDDGTLGA SLDVF EPLP SPFW+HPKVVLTPHNAADTDAD IS+YVA+ Sbjct: 267 DEADILACLDDGTLGAVSLDVFGQEPLPADSPFWTHPKVVLTPHNAADTDADAISRYVAE 326 Query: 301 QIARFEAGGALENLVDRKRGY 321 QIA FEAGG L N VDR RGY Sbjct: 327 QIATFEAGGTLRNTVDRTRGY 347 >ref|NP_106146.1| putative 2-hydroxyacid dehydrogenase [Mesorhizobium loti MAFF303099] dbj|BAB51932.1| putative 2-hydroxyacid dehydrogenase [Mesorhizobium loti MAFF303099] Length = 313 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 169/321 (52%), Positives = 214/321 (66%), Gaps = 8/321 (2%) Query: 1 MGKGALALLINGGSENWSSARWKARFDAVCPDRRVVLLPDGALDPAEVHYAAVWKPKPGE 60 M KG + L + G + RW+ A +R VVL PDGA DP+ + YA VWK KP Sbjct: 1 MEKGRILLAVTG----FHPQRWRELLSA---EREVVLEPDGAKDPS-ITYAVVWKQKPNL 52 Query: 61 LAAFKNLRVIFNLGAGVDALTADRSLPDVPLVRVAVSDLTDRMTEYVVLHVLMHHRQELY 120 L++ NLR IF++GAGVD + AD LPDVP+V+V +LT MTEYVV VL HHRQ L Sbjct: 53 LSSLPNLRAIFSIGAGVDHIFADPGLPDVPIVKVVADNLTQYMTEYVVWRVLDHHRQGLL 112 Query: 121 LRESQRVKRWAPDYQWAASAITVGVMGLGTLGAASAQALRALGFRVVGWSRSEKRIDGIA 180 R+ Q+ K W Q A I+VG+MGLG LG A+A L +LGF V GWSR+E+ + G+A Sbjct: 113 YRQQQQKKIWHEPPQRPAGDISVGIMGLGNLGRAAASVLLSLGFAVNGWSRTERPMQGVA 172 Query: 181 CYHGADGLDAFLRETNILVCLLPLTPDTRHVLNRDAFAKLNRESPLGAPVIINAGRGGLQ 240 Y G GL FL+ T+ILV LLPLTPDT+ ++N +L + + LG V+INAGRG LQ Sbjct: 173 TYSGEAGLIPFLKATDILVVLLPLTPDTQGIINYGVLKELRKRNGLGGSVLINAGRGRLQ 232 Query: 241 NEADILRALDDGTLGAASLDVFETEPLPEASPFWSHPKVVLTPHNAADTDADEISKYVAQ 300 +ADI+RALDDGTL ASLDVFE EPLP+ SP W+HPKV +TPH AA +D ++ + + Sbjct: 233 KDADIVRALDDGTLKEASLDVFEVEPLPKTSPLWNHPKVFVTPHAAATSDPMHLAPTMLR 292 Query: 301 QIARFEAGGALENLVDRKRGY 321 Q+ FE G LENLVDRK GY Sbjct: 293 QMDAFERGEKLENLVDRKAGY 313 >ref|YP_004139295.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV09245.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 313 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 168/321 (52%), Positives = 213/321 (66%), Gaps = 8/321 (2%) Query: 1 MGKGALALLINGGSENWSSARWKARFDAVCPDRRVVLLPDGALDPAEVHYAAVWKPKPGE 60 M KG + L + G + RW+ D + +R VVL PDGA DP+ + YA VWK KP Sbjct: 1 MEKGRILLAVTG----FHPQRWR---DLLSAEREVVLEPDGASDPS-ITYAVVWKQKPNI 52 Query: 61 LAAFKNLRVIFNLGAGVDALTADRSLPDVPLVRVAVSDLTDRMTEYVVLHVLMHHRQELY 120 LA+ NLR IF++GAGVD + AD LPDVP+V++ +LT MTEYVV VL HHRQ L Sbjct: 53 LASLPNLRAIFSIGAGVDHIFADPGLPDVPIVKIVADNLTQYMTEYVVWRVLDHHRQGLL 112 Query: 121 LRESQRVKRWAPDYQWAASAITVGVMGLGTLGAASAQALRALGFRVVGWSRSEKRIDGIA 180 R Q K W Q A I+VG+MGLG+LG A+A L +LGF V GWSR++K + G+A Sbjct: 113 YRSQQSKKIWHEPQQRPAGDISVGIMGLGSLGRAAASVLLSLGFAVNGWSRTDKAMQGVA 172 Query: 181 CYHGADGLDAFLRETNILVCLLPLTPDTRHVLNRDAFAKLNRESPLGAPVIINAGRGGLQ 240 Y G GL FL+ T+ILV LLPLTP+T+ ++N +L + + LG V+INAGRG LQ Sbjct: 173 TYSGEAGLIPFLKATDILVVLLPLTPETKGIINYGVLKELRKRNGLGGSVLINAGRGRLQ 232 Query: 241 NEADILRALDDGTLGAASLDVFETEPLPEASPFWSHPKVVLTPHNAADTDADEISKYVAQ 300 +ADILRALDDGTL ASLDVFE EPLP+ SP W HPKV +TPH AA +D ++ + + Sbjct: 233 KDADILRALDDGTLKEASLDVFEVEPLPKTSPLWGHPKVFVTPHAAATSDPVHLAPIMLR 292 Query: 301 QIARFEAGGALENLVDRKRGY 321 Q+ FE G L+NLVDRK GY Sbjct: 293 QMDAFERGEKLDNLVDRKAGY 313