BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0180.0048.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773804.1| hypothetical protein bll7164 [Bradyrhizobium ja...   156   8e-37
ref|YP_783614.1| hypothetical protein RPE_4715 [Rhodopseudomonas...   154   5e-36
ref|YP_002974796.1| hypothetical protein Rleg_0962 [Rhizobium le...    94   7e-18
ref|YP_766942.1| hypothetical protein RL1336 [Rhizobium legumino...    92   3e-17
ref|ZP_03528577.1| hypothetical protein RetlC8_18159 [Rhizobium ...    88   5e-16

>ref|NP_773804.1| hypothetical protein bll7164 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52429.1| bll7164 [Bradyrhizobium japonicum USDA 110]
          Length = 189

 Score =  156 bits (395), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 89/116 (76%)

Query: 8   AEIIRSLFAAYLANDRASVEAAFAEDFRFSTPYGENIDKPTYFAECWRDSGWIGRHEIER 67
           A +IR LFAAYLANDR  V  A A+DFRF++P+ +++DK TYF  CWRD+GWI RHEIER
Sbjct: 74  ARLIRDLFAAYLANDRQRVSEALADDFRFTSPFDDDLDKATYFERCWRDTGWIARHEIER 133

Query: 68  IMVDGLEAFVTYRCVARDGKSFRNTEFFVFDGDKVSRIDVYFGPSHQDGELVRQER 123
           I V G EAFVTYRC+A DG+SFRNTEF  F G ++ R++VYFG + QDG  + Q R
Sbjct: 134 IFVVGDEAFVTYRCLATDGRSFRNTEFLSFAGGRIRRVEVYFGAAFQDGRFLPQPR 189


>ref|YP_783614.1| hypothetical protein RPE_4715 [Rhodopseudomonas palustris BisA53]
 gb|ABJ08634.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 123

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 94/119 (78%), Gaps = 1/119 (0%)

Query: 1   MTATGHRAEIIRSLFAAYLANDRASVEAAFAEDFRFSTPYGENIDKPTYFAECWRDSGWI 60
           MTA   +A++IR+LFAAYLA DR +VE  FAEDFRF++P+ + +DK TYF  CWR S WI
Sbjct: 1   MTALS-KADVIRNLFAAYLAEDRDAVEGIFAEDFRFTSPFDDRLDKATYFERCWRGSDWI 59

Query: 61  GRHEIERIMVDGLEAFVTYRCVARDGKSFRNTEFFVFDGDKVSRIDVYFGPSHQDGELV 119
            +H++ERI++DG  A VTYRCVA DGKSFRNTE   FDG++++ I+VYFG +++DGE V
Sbjct: 60  AQHKLERIVIDGDTAIVTYRCVATDGKSFRNTEIMAFDGERIAAIEVYFGAAYRDGEFV 118


>ref|YP_002974796.1| hypothetical protein Rleg_0962 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gb|ACS55257.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 114

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 63/104 (60%)

Query: 7   RAEIIRSLFAAYLANDRASVEAAFAEDFRFSTPYGENIDKPTYFAECWRDSGWIGRHEIE 66
           R + +R L+AAYL + +  V A   EDF FS+P  ++ID+ TYF  CW         +IE
Sbjct: 8   REQTVRQLYAAYLDDRKDIVGAMLTEDFTFSSPRDDHIDRATYFERCWPKEPVFRGFDIE 67

Query: 67  RIMVDGLEAFVTYRCVARDGKSFRNTEFFVFDGDKVSRIDVYFG 110
            + +DG EA V YR   RDG SFRN E   F GDK++ +DVYFG
Sbjct: 68  FLAIDGDEAVVRYRAEKRDGGSFRNIESLRFRGDKIASVDVYFG 111


>ref|YP_766942.1| hypothetical protein RL1336 [Rhizobium leguminosarum bv. viciae
           3841]
 emb|CAK06833.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 114

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 63/104 (60%)

Query: 7   RAEIIRSLFAAYLANDRASVEAAFAEDFRFSTPYGENIDKPTYFAECWRDSGWIGRHEIE 66
           R + +R L+AAYL + +  V A   EDF FS+P  ++ID+ TYF  CW         +IE
Sbjct: 8   REQTVRHLYAAYLDDRKDIVGAMLTEDFTFSSPRDDHIDRATYFERCWPKEPVFRGFDIE 67

Query: 67  RIMVDGLEAFVTYRCVARDGKSFRNTEFFVFDGDKVSRIDVYFG 110
            + +DG EA V YR    DG SFRN E F F GDK++ +DVYFG
Sbjct: 68  FLAIDGDEAVVRYRAEKWDGGSFRNIECFRFRGDKIASVDVYFG 111


>ref|ZP_03528577.1| hypothetical protein RetlC8_18159 [Rhizobium etli CIAT 894]
          Length = 113

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 61/110 (55%)

Query: 1   MTATGHRAEIIRSLFAAYLANDRASVEAAFAEDFRFSTPYGENIDKPTYFAECWRDSGWI 60
           M     R + +R L+ AYLA+ +  V A   EDF FS+P  ++ID+  YF  CW      
Sbjct: 1   MNEMRSRQQTVRDLYTAYLADRKDLVGAMLTEDFAFSSPRDDHIDRAAYFKRCWPKEPVF 60

Query: 61  GRHEIERIMVDGLEAFVTYRCVARDGKSFRNTEFFVFDGDKVSRIDVYFG 110
              EIE + VDG EA V YR    DG SF N E   F GD+++ ++VYFG
Sbjct: 61  RTIEIEFLAVDGDEAAVRYRAEKLDGASFANMESLRFRGDRITSVEVYFG 110