BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0180.0046.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001203310.1| hypothetical protein BRADO1166 [Bradyrhizobi...   218   3e-55
ref|YP_001242681.1| hypothetical protein BBta_6888 [Bradyrhizobi...   216   7e-55
ref|NP_773803.1| hypothetical protein bll7163 [Bradyrhizobium ja...   214   3e-54
ref|YP_578707.1| hypothetical protein Nham_3518 [Nitrobacter ham...   196   1e-48
ref|ZP_02188729.1| DGPF protein [alpha proteobacterium BAL199] >...   187   7e-46

>ref|YP_001203310.1| hypothetical protein BRADO1166 [Bradyrhizobium sp. ORS 278]
 emb|CAL75073.1| conserved hypothetical protein with DGPF domain (modular protein)
           [Bradyrhizobium sp. ORS 278]
          Length = 208

 Score =  218 bits (554), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 106/136 (77%), Positives = 117/136 (86%), Gaps = 1/136 (0%)

Query: 1   MRFMMLMIPLGYESAPAKLELDPERVAAMMRYNQALKDAGVLITLEGLHPPATGARVKFD 60
           MRFMMLMIPLGYESAP  + LDPERVAAMMRYN+ALKDAGVLITLEGLHPP+ GARV F 
Sbjct: 71  MRFMMLMIPLGYESAPPDVRLDPERVAAMMRYNEALKDAGVLITLEGLHPPSMGARVSFP 130

Query: 61  TGVPVVIDGPFTEAKEVIGGFWMIEVASRAEAIEWARKCPATANEMIEIRQVQEMADFSE 120
            G PVV DGPF EAKEV+GG+WMIEV SR EA+ WA++CPA+ NE+IEIRQVQEM+DFSE
Sbjct: 131 GGRPVVTDGPFAEAKEVLGGYWMIEVGSREEAVAWAKRCPASENEIIEIRQVQEMSDFSE 190

Query: 121 EVQQAAATF-EHPQGG 135
           EVQQAAA F E P  G
Sbjct: 191 EVQQAAAGFSELPHAG 206


>ref|YP_001242681.1| hypothetical protein BBta_6888 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38775.1| hypothetical protein BBta_6888 [Bradyrhizobium sp. BTAi1]
          Length = 138

 Score =  216 bits (551), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 106/136 (77%), Positives = 118/136 (86%), Gaps = 1/136 (0%)

Query: 1   MRFMMLMIPLGYESAPAKLELDPERVAAMMRYNQALKDAGVLITLEGLHPPATGARVKFD 60
           MRFMMLMIPLGYESAP  ++LDPERVAAMMRYN+ALK+AGVLITLEGLHPP+ GARV F 
Sbjct: 1   MRFMMLMIPLGYESAPPDVQLDPERVAAMMRYNEALKEAGVLITLEGLHPPSMGARVSFA 60

Query: 61  TGVPVVIDGPFTEAKEVIGGFWMIEVASRAEAIEWARKCPATANEMIEIRQVQEMADFSE 120
            G P+V DGPF EAKEV+GGFWMIEVASR EAI WA++CPA+ NE+IEIRQVQEM DFS+
Sbjct: 61  GGQPMVTDGPFAEAKEVLGGFWMIEVASREEAIAWAKQCPASDNEIIEIRQVQEMTDFSD 120

Query: 121 EVQQAAATF-EHPQGG 135
           EVQQAAA F E P  G
Sbjct: 121 EVQQAAAGFAELPHAG 136


>ref|NP_773803.1| hypothetical protein bll7163 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52428.1| bll7163 [Bradyrhizobium japonicum USDA 110]
          Length = 134

 Score =  214 bits (546), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 103/129 (79%), Positives = 113/129 (87%)

Query: 1   MRFMMLMIPLGYESAPAKLELDPERVAAMMRYNQALKDAGVLITLEGLHPPATGARVKFD 60
           MRFMMLMIPLGYE+AP  ++LDPERVAAMMRYN+AL DAGVLITL+GLHPPA GARV F 
Sbjct: 1   MRFMMLMIPLGYETAPPDVQLDPERVAAMMRYNEALNDAGVLITLDGLHPPAMGARVSFA 60

Query: 61  TGVPVVIDGPFTEAKEVIGGFWMIEVASRAEAIEWARKCPATANEMIEIRQVQEMADFSE 120
           TG PVV DGPFTEAKEV+GG+WMIEVASRAEAI WA+KCPA  NE+IEIRQVQEM DF  
Sbjct: 61  TGEPVVTDGPFTEAKEVLGGYWMIEVASRAEAIGWAKKCPAAVNEVIEIRQVQEMTDFPP 120

Query: 121 EVQQAAATF 129
           +VQ AAA F
Sbjct: 121 DVQAAAAGF 129


>ref|YP_578707.1| hypothetical protein Nham_3518 [Nitrobacter hamburgensis X14]
 gb|ABE64247.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 139

 Score =  196 bits (498), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/138 (69%), Positives = 111/138 (80%)

Query: 1   MRFMMLMIPLGYESAPAKLELDPERVAAMMRYNQALKDAGVLITLEGLHPPATGARVKFD 60
           MRFMMLMIP GYE+A      D + VAAMMRYNQ LKDAGVLITL+GLHPP+ GARV F 
Sbjct: 1   MRFMMLMIPKGYETAAPGTMPDAKAVAAMMRYNQDLKDAGVLITLDGLHPPSMGARVSFA 60

Query: 61  TGVPVVIDGPFTEAKEVIGGFWMIEVASRAEAIEWARKCPATANEMIEIRQVQEMADFSE 120
            G P+V DGPFTEAK+V+GG+WMI+VASR EAI WA +CPA++NE+IEIRQVQEMADF  
Sbjct: 61  EGKPLVTDGPFTEAKDVLGGYWMIDVASRDEAIAWATRCPASSNEIIEIRQVQEMADFPA 120

Query: 121 EVQQAAATFEHPQGGWGK 138
           +VQ+AAA FE  QG   K
Sbjct: 121 DVQEAAAGFEAMQGKSAK 138


>ref|ZP_02188729.1| DGPF protein [alpha proteobacterium BAL199]
 gb|EDP64557.1| DGPF protein [alpha proteobacterium BAL199]
          Length = 140

 Score =  187 bits (474), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 88/138 (63%), Positives = 108/138 (78%)

Query: 1   MRFMMLMIPLGYESAPAKLELDPERVAAMMRYNQALKDAGVLITLEGLHPPATGARVKFD 60
           MRFMMLMIP GYE+A   ++L  +RV AMM+YN+AL+ AGVL+ L+GLHPP+ GARV F 
Sbjct: 1   MRFMMLMIPKGYETAGPGIDLPVDRVEAMMKYNEALQKAGVLLALDGLHPPSAGARVSFA 60

Query: 61  TGVPVVIDGPFTEAKEVIGGFWMIEVASRAEAIEWARKCPATANEMIEIRQVQEMADFSE 120
            G P V DGPFTEAKEV+GG+WMI+V SR EAIEWA +CP   NE IEIRQVQEM+D+SE
Sbjct: 61  GGKPTVTDGPFTEAKEVVGGYWMIQVKSREEAIEWASRCPGADNETIEIRQVQEMSDYSE 120

Query: 121 EVQQAAATFEHPQGGWGK 138
           +VQ+AAA+    Q   G+
Sbjct: 121 DVQKAAASLPGMQDSVGQ 138