BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0180.0044.p         (213 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_534599.1| TetR family transcriptional regulator [Rhodopse...   249   1e-64
ref|NP_946464.1| TetR family transcriptional regulator [Rhodopse...   248   4e-64
ref|YP_001990319.1| TetR family transcriptional regulator [Rhodo...   248   4e-64
ref|ZP_01045373.1| Transcriptional regulatory protein, TetR fami...   244   6e-63
ref|NP_773801.1| transcriptional regulator [Bradyrhizobium japon...   244   9e-63

>ref|YP_534599.1| TetR family transcriptional regulator [Rhodopseudomonas palustris
           BisB18]
 gb|ABD90280.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris
           BisB18]
          Length = 236

 Score =  249 bits (637), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 120/138 (86%), Positives = 130/138 (94%)

Query: 1   MSWRKDQGRAERGYHHGNLKEALLQAALDLISKKGPAGFTFADAARMAGVSPAAPYRHFR 60
           MSWRK+  R ERGYHHGNLKEALLQAAL LI++KGP GFTFADAARMAGVSPAAPYRHFR
Sbjct: 1   MSWRKEPRRPERGYHHGNLKEALLQAALGLIAEKGPGGFTFADAARMAGVSPAAPYRHFR 60

Query: 61  DRDELIASIAQRGFEQFESLLTQAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFES 120
           DRDEL++S+AQRGFEQFE++LT AWDDGRPDTV+AFERVGKAYLAFAR EPAFYSAMFES
Sbjct: 61  DRDELLSSVAQRGFEQFEAVLTAAWDDGRPDTVSAFERVGKAYLAFARNEPAFYSAMFES 120

Query: 121 GLPVDSNPTLMAASERAF 138
           G+PVD NPTLMAASERAF
Sbjct: 121 GVPVDLNPTLMAASERAF 138


>ref|NP_946464.1| TetR family transcriptional regulator [Rhodopseudomonas palustris
           CGA009]
 emb|CAE26556.1| probable transcriptional regulator, TetR family [Rhodopseudomonas
           palustris CGA009]
          Length = 234

 Score =  248 bits (633), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 116/138 (84%), Positives = 129/138 (93%)

Query: 1   MSWRKDQGRAERGYHHGNLKEALLQAALDLISKKGPAGFTFADAARMAGVSPAAPYRHFR 60
           MSWRK+QGRAERGYHHGNLKEALLQAAL LI++KGP GFTFADAARMAGVSPAAPYRHFR
Sbjct: 1   MSWRKEQGRAERGYHHGNLKEALLQAALGLIAEKGPGGFTFADAARMAGVSPAAPYRHFR 60

Query: 61  DRDELIASIAQRGFEQFESLLTQAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFES 120
           DRDEL+++IAQRGFE FE +LT+AWDDGRPDTVTAF RVG+AYLAFAR EPA+YSAMFES
Sbjct: 61  DRDELLSNIAQRGFELFEQVLTKAWDDGRPDTVTAFMRVGRAYLAFARSEPAYYSAMFES 120

Query: 121 GLPVDSNPTLMAASERAF 138
           G+P+D NP L+ ASERAF
Sbjct: 121 GVPIDVNPMLLTASERAF 138


>ref|YP_001990319.1| TetR family transcriptional regulator [Rhodopseudomonas palustris
           TIE-1]
 gb|ACE99843.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris
           TIE-1]
          Length = 234

 Score =  248 bits (633), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 116/138 (84%), Positives = 129/138 (93%)

Query: 1   MSWRKDQGRAERGYHHGNLKEALLQAALDLISKKGPAGFTFADAARMAGVSPAAPYRHFR 60
           MSWRK+QGRAERGYHHGNLKEALLQAAL LI++KGP GFTFADAARMAGVSPAAPYRHFR
Sbjct: 1   MSWRKEQGRAERGYHHGNLKEALLQAALGLIAEKGPGGFTFADAARMAGVSPAAPYRHFR 60

Query: 61  DRDELIASIAQRGFEQFESLLTQAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFES 120
           DRDEL+++IAQRGFE FE +LT+AWDDGRPDTVTAF RVG+AYLAFAR EPA+YSAMFES
Sbjct: 61  DRDELLSNIAQRGFELFEQVLTKAWDDGRPDTVTAFMRVGRAYLAFARSEPAYYSAMFES 120

Query: 121 GLPVDSNPTLMAASERAF 138
           G+P+D NP L+ ASERAF
Sbjct: 121 GVPIDVNPMLLTASERAF 138


>ref|ZP_01045373.1| Transcriptional regulatory protein, TetR family protein
           [Nitrobacter sp. Nb-311A]
 gb|EAQ36701.1| Transcriptional regulatory protein, TetR family protein
           [Nitrobacter sp. Nb-311A]
          Length = 237

 Score =  244 bits (623), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 118/139 (84%), Positives = 129/139 (92%)

Query: 1   MSWRKDQGRAERGYHHGNLKEALLQAALDLISKKGPAGFTFADAARMAGVSPAAPYRHFR 60
           MSWRKD  R ERGYHHGNLKEALLQAAL LI++KG AGFTFADAAR AGVSPAAPYRHFR
Sbjct: 1   MSWRKDHRRPERGYHHGNLKEALLQAALGLIAEKGAAGFTFADAARSAGVSPAAPYRHFR 60

Query: 61  DRDELIASIAQRGFEQFESLLTQAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFES 120
           DRDEL+ASIAQRGFEQFE+LLT+AWDDGRPDTV+AFERVG+AYLAFAR EPA+YSAMFES
Sbjct: 61  DRDELLASIAQRGFEQFETLLTKAWDDGRPDTVSAFERVGRAYLAFARNEPAYYSAMFES 120

Query: 121 GLPVDSNPTLMAASERAFA 139
           G+P+D NP L AASERAF+
Sbjct: 121 GVPIDVNPMLSAASERAFS 139


>ref|NP_773801.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52426.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 246

 Score =  244 bits (622), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 120/138 (86%), Positives = 129/138 (93%)

Query: 1   MSWRKDQGRAERGYHHGNLKEALLQAALDLISKKGPAGFTFADAARMAGVSPAAPYRHFR 60
           MSWRK+  RAERGYHHGNLKEALLQAAL LI++KG AGFTFADAARMAGVS AAPYRHFR
Sbjct: 1   MSWRKETRRAERGYHHGNLKEALLQAALGLIAEKGAAGFTFADAARMAGVSAAAPYRHFR 60

Query: 61  DRDELIASIAQRGFEQFESLLTQAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFES 120
           DRDEL++SIAQRGFEQFE+ LT AWDDGRPDTVTAFERVG+AYLAFAREEPAFY+AMFES
Sbjct: 61  DRDELLSSIAQRGFEQFEARLTAAWDDGRPDTVTAFERVGRAYLAFAREEPAFYNAMFES 120

Query: 121 GLPVDSNPTLMAASERAF 138
           GLPVD+NP L AASERAF
Sbjct: 121 GLPVDANPALQAASERAF 138