BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0180.0043.p (167 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242678.1| hypothetical protein BBta_6885 [Bradyrhizobi... 246 6e-64 ref|NP_773800.1| hypothetical protein bll7160 [Bradyrhizobium ja... 239 7e-62 ref|YP_578705.1| hypothetical protein Nham_3516 [Nitrobacter ham... 219 9e-56 ref|YP_534598.1| hypothetical protein RPC_4757 [Rhodopseudomonas... 218 2e-55 ref|YP_571273.1| hypothetical protein RPD_4153 [Rhodopseudomonas... 211 2e-53 >ref|YP_001242678.1| hypothetical protein BBta_6885 [Bradyrhizobium sp. BTAi1] gb|ABQ38772.1| hypothetical protein BBta_6885 [Bradyrhizobium sp. BTAi1] Length = 162 Score = 246 bits (629), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 125/163 (76%), Positives = 136/163 (83%), Gaps = 3/163 (1%) Query: 5 MAYTADVNRWRGPVEEP-YRPYFYATPWHPLKIAGIILGFMIWWPIGLALLFFTLGSRKM 63 MAYTADVNRWRG EE YRP+ +PWHP IA +LGF+IWWPIGLALLFFTLGSRKM Sbjct: 1 MAYTADVNRWRGSEEEQRYRPHMLESPWHPGWIAVTVLGFIIWWPIGLALLFFTLGSRKM 60 Query: 64 ACWSHNDMDRWQNKMERMQDKMERMKSRMERRGFPFGGFGPPSSGNRAFDEYRQDTLRRL 123 ACW N DRWQNKMERMQ KM+RM+ +MERRGF FG P SSGNRAFDEYR +TLRRL Sbjct: 61 ACW--NGGDRWQNKMERMQWKMDRMRDKMERRGFGFGFSQPASSGNRAFDEYRMETLRRL 118 Query: 124 EEEQVEFKNFLDRLRHAKDKEEFDAFMAQHKTRPTPPTDQPPQ 166 EEEQ EF++FL RLRHAKDKEEFDAFMAQHK RPTPP +QPPQ Sbjct: 119 EEEQQEFRDFLTRLRHAKDKEEFDAFMAQHKPRPTPPNEQPPQ 161 >ref|NP_773800.1| hypothetical protein bll7160 [Bradyrhizobium japonicum USDA 110] dbj|BAC52425.1| bll7160 [Bradyrhizobium japonicum USDA 110] Length = 177 Score = 239 bits (611), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 132/165 (80%), Positives = 140/165 (84%), Gaps = 4/165 (2%) Query: 4 EMAYTADVNRWRGPVEEPY-RPYFYATPWHPLKIAGIILGFMIWWPIGLALLFFTLGSRK 62 EMAYTADVNRWRGP ++ Y RP+ TPWHP IA ILGF+IWWPIGLALLFFTLGSRK Sbjct: 16 EMAYTADVNRWRGPSDQHYERPHMLDTPWHPGWIAVTILGFIIWWPIGLALLFFTLGSRK 75 Query: 63 MACWSHNDMDRWQNKMERMQDKMERMKSRMERRGFPFGGFGPPSSGNRAFDEYRQDTLRR 122 M CWSH D RWQNKMERMQ KM+RM+ RMERRGF FG FGPPSSGNRAFDEYR +TL+R Sbjct: 76 MGCWSHQD--RWQNKMERMQYKMDRMRGRMERRGFGFG-FGPPSSGNRAFDEYRTETLQR 132 Query: 123 LEEEQVEFKNFLDRLRHAKDKEEFDAFMAQHKTRPTPPTDQPPQG 167 LEEEQVEFKNFLDRLRHAKDKEEFD FMAQHKTRPTPP QG Sbjct: 133 LEEEQVEFKNFLDRLRHAKDKEEFDQFMAQHKTRPTPPPTDQQQG 177 >ref|YP_578705.1| hypothetical protein Nham_3516 [Nitrobacter hamburgensis X14] gb|ABE64245.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 165 Score = 219 bits (559), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 120/165 (72%), Positives = 133/165 (80%), Gaps = 8/165 (4%) Query: 5 MAYTADVNRWRGPVEEPYR-----PYFYATPWHPLKIAGIILGFMIWWPIGLALLFFTLG 59 MA TAD +RW GP P + P F PWHPL+I I+LGFM+WWPIGLALLFFTLG Sbjct: 1 MANTADYDRWNGPNNVPGQGCDRYPRFMGAPWHPLRIVLIVLGFMLWWPIGLALLFFTLG 60 Query: 60 SRKMACWSHNDMDRWQNKMERMQDKMERMKSRMERRGFPFGGFGPPSSGNRAFDEYRQDT 119 SRKM CWS+ DR++NKM+RMQ KMERM+ MERRGF F GFG PSSGNRAFDEYR +T Sbjct: 61 SRKMGCWSN---DRFENKMQRMQYKMERMRDHMERRGFGFRGFGTPSSGNRAFDEYRMET 117 Query: 120 LRRLEEEQVEFKNFLDRLRHAKDKEEFDAFMAQHKTRPTPPTDQP 164 LRRLEEEQ EFK+FLDRLRHAKDKEEFDAFMAQH+ RPTPP DQP Sbjct: 118 LRRLEEEQTEFKDFLDRLRHAKDKEEFDAFMAQHRPRPTPPNDQP 162 >ref|YP_534598.1| hypothetical protein RPC_4757 [Rhodopseudomonas palustris BisB18] gb|ABD90279.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 156 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 112/163 (68%), Positives = 126/163 (77%), Gaps = 7/163 (4%) Query: 5 MAYTADVNRWRGPVEEPYRPYFYATPWHPLKIAGIILGFMIWWPIGLALLFFTLGSRKMA 64 MA AD+NRW G +E Y P +PWHP I +LGF+IWWPIGLALLFFTLGSRKM Sbjct: 1 MANAADLNRWGGSADERY-PPMSRSPWHPGWIIVTVLGFIIWWPIGLALLFFTLGSRKMG 59 Query: 65 CWSHNDMDRWQNKMERMQDKMERMKSRMERRGFPFGGFGPPSSGNRAFDEYRQDTLRRLE 124 CW D +R+Q+KMERMQDKMERM+ RM+R GF GFGPPSSGNRAFDEYR+ TLRRLE Sbjct: 60 CW---DSNRFQHKMERMQDKMERMRGRMDRSGF---GFGPPSSGNRAFDEYREATLRRLE 113 Query: 125 EEQVEFKNFLDRLRHAKDKEEFDAFMAQHKTRPTPPTDQPPQG 167 EEQ EFK+FL+RLR AKDK EFD FMAQH+ RP P TD PQ Sbjct: 114 EEQTEFKDFLERLRQAKDKAEFDQFMAQHRPRPNPSTDGQPQA 156 >ref|YP_571273.1| hypothetical protein RPD_4153 [Rhodopseudomonas palustris BisB5] gb|ABE41372.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 156 Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 109/163 (66%), Positives = 124/163 (76%), Gaps = 7/163 (4%) Query: 5 MAYTADVNRWRGPVEEPYRPYFYATPWHPLKIAGIILGFMIWWPIGLALLFFTLGSRKMA 64 MA AD NRW GP ++ Y+P ++ W P I + GF++WWPIGLALLF+TL SR M Sbjct: 1 MANAADYNRW-GPTQQRYQPALRSS-WSPGWILLTVAGFIVWWPIGLALLFYTLWSRNMG 58 Query: 65 CWSHNDMDRWQNKMERMQDKMERMKSRMERRGFPFGGFGPPSSGNRAFDEYRQDTLRRLE 124 CW D R+ NKMERMQ KMERM+ RM+R GF GFGPPSSGNRAFDEYR DTLRRLE Sbjct: 59 CWDRGD--RFSNKMERMQYKMERMRERMDRSGF---GFGPPSSGNRAFDEYRTDTLRRLE 113 Query: 125 EEQVEFKNFLDRLRHAKDKEEFDAFMAQHKTRPTPPTDQPPQG 167 EEQV+FK FLDRLRHAKDKEEFDAFMAQH+T+P P D P QG Sbjct: 114 EEQVQFKEFLDRLRHAKDKEEFDAFMAQHRTKPAPSPDAPQQG 156