BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0180.0025.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_353729.2| 2-dehydro-3-deoxygalactonate kinase [Agrobacter...   107   8e-22
ref|YP_002543562.1| 2-dehydro-3-deoxygalactonokinase protein [Ag...   105   2e-21
gb|EGP59024.1| 2-dehydro-3-deoxygalactonate kinase [Agrobacteriu...   105   3e-21
ref|YP_004277954.1| 2-keto-3-deoxy-galactonokinase [Agrobacteriu...   103   9e-21
ref|ZP_08528877.1| 2-dehydro-3-deoxygalactonate kinase [Agrobact...   103   1e-20

>ref|NP_353729.2| 2-dehydro-3-deoxygalactonate kinase [Agrobacterium tumefaciens
          str. C58]
 gb|AAK86514.2| 2-dehydro-3-deoxygalactonate kinase [Agrobacterium tumefaciens
          str. C58]
          Length = 304

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 59/72 (81%)

Query: 1  MSGISYVAVDWGTSSFRLWLMGAGGKVLGERRSDEGMTAAARTGFAAVLQSHLDALGVQA 60
          MS  +++AVDWGT+SFRLWL+   G VL ERRS EGMT A RTGFA VLQ+HLDA+G  A
Sbjct: 1  MSEPAFIAVDWGTTSFRLWLLSRSGAVLAERRSAEGMTTAMRTGFADVLQAHLDAIGAPA 60

Query: 61 DLPVVICGMAGA 72
          DLPV++CGMAGA
Sbjct: 61 DLPVLVCGMAGA 72


>ref|YP_002543562.1| 2-dehydro-3-deoxygalactonokinase protein [Agrobacterium
          radiobacter K84]
 gb|ACM25637.1| 2-dehydro-3-deoxygalactonokinase protein [Agrobacterium
          radiobacter K84]
          Length = 310

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 57/68 (83%)

Query: 5  SYVAVDWGTSSFRLWLMGAGGKVLGERRSDEGMTAAARTGFAAVLQSHLDALGVQADLPV 64
          +YVAVDWGTSSFRLWL+G    +LGERRS EGMT+AA+TGFA VLQSHL AL    +LPV
Sbjct: 5  AYVAVDWGTSSFRLWLIGEDDSILGERRSGEGMTSAAQTGFAQVLQSHLTALSAPDNLPV 64

Query: 65 VICGMAGA 72
          ++CGMAGA
Sbjct: 65 IVCGMAGA 72


>gb|EGP59024.1| 2-dehydro-3-deoxygalactonate kinase [Agrobacterium tumefaciens
          F2]
          Length = 304

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 58/72 (80%)

Query: 1  MSGISYVAVDWGTSSFRLWLMGAGGKVLGERRSDEGMTAAARTGFAAVLQSHLDALGVQA 60
          MS  +++AVDWGT+SFRLWL+   G VL ERRS EGMT A RTGFA VLQSHLDA+G   
Sbjct: 1  MSEPAFIAVDWGTTSFRLWLLSRSGAVLAERRSAEGMTTAMRTGFAEVLQSHLDAIGAPD 60

Query: 61 DLPVVICGMAGA 72
          +LPV++CGMAGA
Sbjct: 61 NLPVLVCGMAGA 72


>ref|YP_004277954.1| 2-keto-3-deoxy-galactonokinase [Agrobacterium sp. H13-3]
 gb|ADY63634.1| 2-keto-3-deoxy-galactonokinase [Agrobacterium sp. H13-3]
          Length = 304

 Score =  103 bits (257), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 56/72 (77%)

Query: 1  MSGISYVAVDWGTSSFRLWLMGAGGKVLGERRSDEGMTAAARTGFAAVLQSHLDALGVQA 60
          MS  +++AVDWGT+SFRLWL+   G VL ERRS EGMT A RTGF  VLQSHLDA+G   
Sbjct: 1  MSEPAFIAVDWGTTSFRLWLLSRSGAVLAERRSAEGMTTAMRTGFTEVLQSHLDAIGAPE 60

Query: 61 DLPVVICGMAGA 72
           LPV+ICGMAGA
Sbjct: 61 KLPVLICGMAGA 72


>ref|ZP_08528877.1| 2-dehydro-3-deoxygalactonate kinase [Agrobacterium sp. ATCC
          31749]
 gb|EGL64659.1| 2-dehydro-3-deoxygalactonate kinase [Agrobacterium sp. ATCC
          31749]
          Length = 304

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 58/72 (80%)

Query: 1  MSGISYVAVDWGTSSFRLWLMGAGGKVLGERRSDEGMTAAARTGFAAVLQSHLDALGVQA 60
          MS  +++AVDWGT+SFRLWL+   G VL ERRS EGMT A RTGFA VL++HL A+G  A
Sbjct: 1  MSEPAFIAVDWGTTSFRLWLLSRSGAVLAERRSAEGMTTAMRTGFAEVLEAHLKAIGAPA 60

Query: 61 DLPVVICGMAGA 72
          DLPV++CGMAGA
Sbjct: 61 DLPVLVCGMAGA 72