BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0180.0014.p         (153 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001205682.1| putative TRAP-type C4-dicarboxylate transpor...   266   7e-70
ref|NP_947883.1| TRAP dicarboxylate family transporter subunit D...   265   1e-69
ref|YP_001991795.1| TRAP dicarboxylate transporter subunit DctM ...   265   2e-69
ref|YP_001240022.1| putative TRAP-type C4-dicarboxylate transpor...   265   2e-69
ref|YP_532397.1| TRAP C4-dicarboxylate transport system permease...   263   8e-69

>ref|YP_001205682.1| putative TRAP-type C4-dicarboxylate transport system large permease
           component DctM [Bradyrhizobium sp. ORS 278]
 emb|CAL77456.1| putative TRAP-type C4-dicarboxylate transporter, DctM subunit;
           putative membrane component [Bradyrhizobium sp. ORS 278]
          Length = 452

 Score =  266 bits (680), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 134/142 (94%), Positives = 139/142 (97%)

Query: 1   MTVFGIGISYGLATLFAMFSGMPIAFALGAVAVVFMAIYMPAASLDTVTQNVYEEMASIT 60
           M+VFGIGI+YGL+TLFAMF+GMPIAFALGAVAVVFMAIYMP ASLDTVTQNVYEEMASIT
Sbjct: 1   MSVFGIGIAYGLSTLFAMFAGMPIAFALGAVAVVFMAIYMPTASLDTVTQNVYEEMASIT 60

Query: 61  LLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC 120
           LLSIPLFILKGAAIG+SRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC
Sbjct: 61  LLSIPLFILKGAAIGRSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC 120

Query: 121 SAIGSAGIPEMRKRGYSGXPAA 142
           SAIGSAGIPEMRKRGYSG  AA
Sbjct: 121 SAIGSAGIPEMRKRGYSGGFAA 142


>ref|NP_947883.1| TRAP dicarboxylate family transporter subunit DctM
           [Rhodopseudomonas palustris CGA009]
 emb|CAE27982.1| TrapT family, dctM subunit, C4-dicarboxylate transport
           [Rhodopseudomonas palustris CGA009]
          Length = 452

 Score =  265 bits (678), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 134/138 (97%), Positives = 135/138 (97%)

Query: 1   MTVFGIGISYGLATLFAMFSGMPIAFALGAVAVVFMAIYMPAASLDTVTQNVYEEMASIT 60
           MTV GIGISYGLATL AMFSGMPIAFALGAVA+VFMAIYMP ASLDTVTQNVYEEMASIT
Sbjct: 1   MTVLGIGISYGLATLAAMFSGMPIAFALGAVALVFMAIYMPHASLDTVTQNVYEEMASIT 60

Query: 61  LLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC 120
           LLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC
Sbjct: 61  LLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC 120

Query: 121 SAIGSAGIPEMRKRGYSG 138
           SAIGSAGIPEMRKRGYSG
Sbjct: 121 SAIGSAGIPEMRKRGYSG 138


>ref|YP_001991795.1| TRAP dicarboxylate transporter subunit DctM [Rhodopseudomonas
           palustris TIE-1]
 gb|ACF01320.1| TRAP dicarboxylate transporter, DctM subunit [Rhodopseudomonas
           palustris TIE-1]
          Length = 452

 Score =  265 bits (677), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 134/138 (97%), Positives = 135/138 (97%)

Query: 1   MTVFGIGISYGLATLFAMFSGMPIAFALGAVAVVFMAIYMPAASLDTVTQNVYEEMASIT 60
           MTV GIGISYGLATL AMFSGMPIAFALGAVA+VFMAIYMP ASLDTVTQNVYEEMASIT
Sbjct: 1   MTVLGIGISYGLATLAAMFSGMPIAFALGAVALVFMAIYMPHASLDTVTQNVYEEMASIT 60

Query: 61  LLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC 120
           LLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC
Sbjct: 61  LLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC 120

Query: 121 SAIGSAGIPEMRKRGYSG 138
           SAIGSAGIPEMRKRGYSG
Sbjct: 121 SAIGSAGIPEMRKRGYSG 138


>ref|YP_001240022.1| putative TRAP-type C4-dicarboxylate transporter, DctM subunit
           [Bradyrhizobium sp. BTAi1]
 gb|ABQ36116.1| putative TRAP-type C4-dicarboxylate transporter, DctM subunit
           [Bradyrhizobium sp. BTAi1]
          Length = 452

 Score =  265 bits (677), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 134/142 (94%), Positives = 139/142 (97%)

Query: 1   MTVFGIGISYGLATLFAMFSGMPIAFALGAVAVVFMAIYMPAASLDTVTQNVYEEMASIT 60
           M+VFGIGI+YG ATLFAMF+GMPIAFALGAVAVVFMAIYMP+ASLDTVTQNVYEEMASIT
Sbjct: 1   MSVFGIGIAYGAATLFAMFAGMPIAFALGAVAVVFMAIYMPSASLDTVTQNVYEEMASIT 60

Query: 61  LLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC 120
           LLSIPLFILKGAAIG+SRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC
Sbjct: 61  LLSIPLFILKGAAIGRSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC 120

Query: 121 SAIGSAGIPEMRKRGYSGXPAA 142
           SAIGSAGIPEMRKRGYSG  AA
Sbjct: 121 SAIGSAGIPEMRKRGYSGGFAA 142


>ref|YP_532397.1| TRAP C4-dicarboxylate transport system permease DctM
           [Rhodopseudomonas palustris BisB18]
 gb|ABD88078.1| TRAP dicarboxylate transporter- DctM subunit [Rhodopseudomonas
           palustris BisB18]
          Length = 452

 Score =  263 bits (671), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 132/138 (95%), Positives = 136/138 (98%)

Query: 1   MTVFGIGISYGLATLFAMFSGMPIAFALGAVAVVFMAIYMPAASLDTVTQNVYEEMASIT 60
           M+V GIGISYG+ATL AMFSGMPIAFALGAVAV+FMAIYMPAASLDTVTQNVYEEMASIT
Sbjct: 1   MSVLGIGISYGVATLLAMFSGMPIAFALGAVAVLFMAIYMPAASLDTVTQNVYEEMASIT 60

Query: 61  LLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC 120
           LLSIPLFILKGAAIGKSRAGQDLYSALHAWL+RVPGGLGVANVFACALFAAMAGSSPATC
Sbjct: 61  LLSIPLFILKGAAIGKSRAGQDLYSALHAWLNRVPGGLGVANVFACALFAAMAGSSPATC 120

Query: 121 SAIGSAGIPEMRKRGYSG 138
           SAIGSAGIPEMRKRGYSG
Sbjct: 121 SAIGSAGIPEMRKRGYSG 138