BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0180.0009.p         (52 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771410.1| soluble lytic transglycosylase [Bradyrhizobium ...    56   2e-06

>ref|NP_771410.1| soluble lytic transglycosylase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50035.1| blr4770 [Bradyrhizobium japonicum USDA 110]
          Length = 765

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 31/40 (77%)

Query: 6   KKIRPADMLYAIGEPDIVLYFAADLAEESTDVGMLEALGK 45
           +++R ADMLY IGE D V Y+A DLA+ESTDV  LE LG+
Sbjct: 510 ERVRAADMLYGIGERDTVFYYAEDLAKESTDVAALEGLGE 549