BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0179.0006.p         (215 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774826.1| hypothetical protein blr8186 [Bradyrhizobium ja...   440   e-122
ref|ZP_08627700.1| hypothetical protein CSIRO_0762 [Bradyrhizobi...   433   e-120
ref|YP_001523927.1| hypothetical protein AZC_1011 [Azorhizobium ...   245   4e-63
ref|YP_487960.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris...   240   1e-61
gb|AEG03644.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium...   239   2e-61

>ref|NP_774826.1| hypothetical protein blr8186 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53451.1| blr8186 [Bradyrhizobium japonicum USDA 110]
          Length = 224

 Score =  440 bits (1131), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MRFSVFGAMAIVLSGCASRSGLVEADIISTPSEYAQLVDGVYTLPAVDISGVDPAMLRQR 60
           MRFSVFGAMAIVLSGCASRSGLVEADIISTPSEYAQLVDGVYTLPAVDISGVDPAMLRQR
Sbjct: 10  MRFSVFGAMAIVLSGCASRSGLVEADIISTPSEYAQLVDGVYTLPAVDISGVDPAMLRQR 69

Query: 61  VDYTTNEPVGTIVIDTAAHQLYLVEGDGKAMRYGIGVGKDGLAFAGTATIRRKAEWPHWT 120
           VDYTTNEPVGTIVIDTAAHQLYLVEGDGKAMRYGIGVGKDGLAFAGTATIRRKAEWPHWT
Sbjct: 70  VDYTTNEPVGTIVIDTAAHQLYLVEGDGKAMRYGIGVGKDGLAFAGTATIRRKAEWPHWT 129

Query: 121 PTKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGRAVS 180
           PTKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGRAVS
Sbjct: 130 PTKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGRAVS 189

Query: 181 SGCIRLINQDIIDLYSRVKIGSRVVVIQGGRAVSS 215
           SGCIRLINQDIIDLYSRVKIGSRVVVIQGGRAVSS
Sbjct: 190 SGCIRLINQDIIDLYSRVKIGSRVVVIQGGRAVSS 224


>ref|ZP_08627700.1| hypothetical protein CSIRO_0762 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09604.1| hypothetical protein CSIRO_0762 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 215

 Score =  433 bits (1114), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/215 (98%), Positives = 212/215 (98%)

Query: 1   MRFSVFGAMAIVLSGCASRSGLVEADIISTPSEYAQLVDGVYTLPAVDISGVDPAMLRQR 60
           MRFSVFGAMAIVLSGCASRSGLVEADI STPSEYAQLVDGVYTLPAVDIS VDPAMLRQR
Sbjct: 1   MRFSVFGAMAIVLSGCASRSGLVEADITSTPSEYAQLVDGVYTLPAVDISRVDPAMLRQR 60

Query: 61  VDYTTNEPVGTIVIDTAAHQLYLVEGDGKAMRYGIGVGKDGLAFAGTATIRRKAEWPHWT 120
           VDYTTNEPVGTIVIDTAAHQLYLVEGDGKAMRYGIGVGKDGLAFAGTATIRRKAEWPHWT
Sbjct: 61  VDYTTNEPVGTIVIDTAAHQLYLVEGDGKAMRYGIGVGKDGLAFAGTATIRRKAEWPHWT 120

Query: 121 PTKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGRAVS 180
           PTKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGRAVS
Sbjct: 121 PTKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGRAVS 180

Query: 181 SGCIRLINQDIIDLYSRVKIGSRVVVIQGGRAVSS 215
           SGCIRLINQDIIDLYSR KIGSRVVVIQGGRAVSS
Sbjct: 181 SGCIRLINQDIIDLYSRAKIGSRVVVIQGGRAVSS 215


>ref|YP_001523927.1| hypothetical protein AZC_1011 [Azorhizobium caulinodans ORS 571]
 dbj|BAF87009.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 220

 Score =  245 bits (625), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 115/208 (55%), Positives = 149/208 (71%), Gaps = 1/208 (0%)

Query: 2   RFSVFGAMAIVLSGCASRSGLVEADIISTPSEYAQLVDGVYTLPAVDISGVDPAMLRQRV 61
           R ++     ++L+ C + S       +  P  Y ++V   + +PAVD SG+DP +LRQ V
Sbjct: 14  RRALVLGTPLLLAACVTNSPPPVVQTLGDP-RYGEVVGEPFEVPAVDTSGLDPRLLRQVV 72

Query: 62  DYTTNEPVGTIVIDTAAHQLYLVEGDGKAMRYGIGVGKDGLAFAGTATIRRKAEWPHWTP 121
           DY +  PVGTIV+D     LYLVE DGKA+RYG+GVGK G ++ G ATI+RK +WPHWTP
Sbjct: 73  DYPSKYPVGTIVVDVPNRYLYLVEKDGKAIRYGVGVGKQGYSYRGWATIKRKEKWPHWTP 132

Query: 122 TKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGRAVSS 181
           T NM+ ++P RY   A+G+ GG  NPLGPRALYL+ G+RDTMFR+HGT EP+TIG  VSS
Sbjct: 133 TPNMIAKQPERYKPYAAGLPGGETNPLGPRALYLYDGDRDTMFRLHGTIEPDTIGTEVSS 192

Query: 182 GCIRLINQDIIDLYSRVKIGSRVVVIQG 209
           GCIRL+NQDIIDLY RV +G+RV+VI  
Sbjct: 193 GCIRLLNQDIIDLYERVPLGTRVIVINN 220


>ref|YP_487960.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gb|ABD09049.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 217

 Score =  240 bits (612), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 119/211 (56%), Positives = 151/211 (71%), Gaps = 13/211 (6%)

Query: 6   FGAMAIVLSGCASRSGLVEADIISTP----------SEYAQLVDGVYTLPAVDISGVDPA 55
             A+A+ L GC ++S   EA++   P          + YA +    + +  +D   + PA
Sbjct: 9   LAAVAVTLGGCVTQS---EAELDLGPPKSTVGPAIAARYAAIDTDKHPIAGIDPEDLQPA 65

Query: 56  MLRQRVDYTTNEPVGTIVIDTAAHQLYLVEGDGKAMRYGIGVGKDGLAFAGTATIRRKAE 115
            +RQ VDY T+EP GT+V+D     LYLV   GKA+RYG+GVGK GLAF+GTA + RKAE
Sbjct: 66  YVRQLVDYKTDEPPGTVVVDPHRRFLYLVMEGGKALRYGVGVGKAGLAFSGTAHVGRKAE 125

Query: 116 WPHWTPTKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETI 175
           WPHWTPTKNM+ REP RYG  ASGM GG  NPLGPRALYLF+  +DT++RIHGTTEPETI
Sbjct: 126 WPHWTPTKNMIAREPQRYGKWASGMDGGATNPLGPRALYLFKDGKDTLYRIHGTTEPETI 185

Query: 176 GRAVSSGCIRLINQDIIDLYSRVKIGSRVVV 206
           G+AVSSGCIR++NQD+IDLY+RV  G++VVV
Sbjct: 186 GQAVSSGCIRMLNQDVIDLYARVPKGAKVVV 216


>gb|AEG03644.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 246

 Score =  239 bits (609), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 117/175 (66%), Positives = 133/175 (76%)

Query: 34  YAQLVDGVYTLPAVDISGVDPAMLRQRVDYTTNEPVGTIVIDTAAHQLYLVEGDGKAMRY 93
           Y    +  + LPA DIS V+P  LRQ+V Y T+EP GT+VIDT    LYLV+G G A+RY
Sbjct: 47  YGAKSEEKFPLPATDISKVEPRFLRQQVPYVTHEPPGTVVIDTENRFLYLVQGGGMALRY 106

Query: 94  GIGVGKDGLAFAGTATIRRKAEWPHWTPTKNMMNREPARYGHLASGMAGGLGNPLGPRAL 153
           GIGVGK GL F G A + RKAEWP WTPT +M+ REP RYG LA GM  GL NPLGPRAL
Sbjct: 107 GIGVGKAGLEFEGEARVGRKAEWPRWTPTSDMVAREPERYGPLAGGMDPGLRNPLGPRAL 166

Query: 154 YLFQGERDTMFRIHGTTEPETIGRAVSSGCIRLINQDIIDLYSRVKIGSRVVVIQ 208
           YL+QG RDT+FRIHGTTE  +IG+AVSSGCIRL N DIIDLYSRV  GSRVVV+Q
Sbjct: 167 YLYQGNRDTLFRIHGTTEAWSIGKAVSSGCIRLFNPDIIDLYSRVPEGSRVVVLQ 221