BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0178.0005.p (323 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_444048.1| transposase of insertion sequence NGRIS-33a [Si... 439 e-121 ref|YP_578265.1| transposase IS116/IS110/IS902 [Nitrobacter hamb... 432 e-119 ref|YP_579127.1| transposase IS116/IS110/IS902 [Nitrobacter hamb... 429 e-118 ref|NP_659850.1| insertion sequence transposase protein [Rhizobi... 426 e-117 ref|YP_004534926.1| Y4rJ [Novosphingobium sp. PP1Y] >gi|33393975... 422 e-116 >ref|NP_444048.1| transposase of insertion sequence NGRIS-33a [Sinorhizobium fredii NGR234] sp|P55643.1|Y4RJ_RHISN RecName: Full=Putative transposase y4rJ gb|AAB91835.1| putative transposase of insertion sequence NGRIS-33a [Sinorhizobium fredii NGR234] Length = 396 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 215/301 (71%), Positives = 249/301 (82%), Gaps = 8/301 (2%) Query: 1 LFARFLKLSEKSRAKTGHTYPIVTIQEAGLDGFWVHRVLEKEGIESHVVDPASIATSSRR 60 L ARF +L K+RA+TG +P + IQEAGLDGFW+HRVL+ EGIESHVVDPA I TS RR Sbjct: 58 LLARFAELKRKARARTGRYFPTIVIQEAGLDGFWIHRVLQAEGIESHVVDPAPIPTSRRR 117 Query: 61 RRAKTDRIDGEALLRTLMAYKRGEPRVCAMVRAPSPEEEDRRRICRERKALIVERVAHVN 120 RRAKTD+IDGE L+R L+AYKRGEPRVCAM+R P+PEEEDRRRI RERKAL ERV HVN Sbjct: 118 RRAKTDKIDGETLVRALLAYKRGEPRVCAMLRVPTPEEEDRRRISRERKALTNERVRHVN 177 Query: 121 RLKGLLFSQGITNYEPLRKDRRERLAELRTGDGRMLPAHMKAQICRELDRLELLLEQIRA 180 R+KGLLFSQG++ Y+PLR+DRR RL ELRTGDGR LP H+KAQ+ RELDRLELL+ QI+A Sbjct: 178 RIKGLLFSQGVSGYQPLRRDRRTRLEELRTGDGRPLPTHLKAQVGRELDRLELLIGQIKA 237 Query: 181 VEDERDTLIAAQ-------AATATPSPVTMLINLKGIGAEFAAILWSEGLFRRFDNRRQV 233 VE ERD ++AA A P+P ML+ LKGIG EFAA+LWSEGL R FDNRRQV Sbjct: 238 VEVERDAMLAAAPVGSAHFADCEQPAP-AMLLALKGIGPEFAAVLWSEGLSRHFDNRRQV 296 Query: 234 AAYAGLAPTPWQSGSIDREQGVSKAGNPRLRATLIQMAWLWLRHQPNSALAQWFNERVRR 293 AAYAGLAPTPWQSGS+D +QGVSKAGNPRLR TLIQ AWLWLRHQP+SAL+ WF +R ++ Sbjct: 297 AAYAGLAPTPWQSGSVDHDQGVSKAGNPRLRTTLIQGAWLWLRHQPHSALSLWFKQRGKQ 356 Query: 294 S 294 + Sbjct: 357 N 357 >ref|YP_578265.1| transposase IS116/IS110/IS902 [Nitrobacter hamburgensis X14] gb|ABE63805.1| transposase IS116/IS110/IS902 [Nitrobacter hamburgensis X14] Length = 383 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 205/295 (69%), Positives = 249/295 (84%), Gaps = 2/295 (0%) Query: 1 LFARFLKLSEKSRAKTGHTYPIVTIQEAGLDGFWVHRVLEKEGIESHVVDPASIATSSRR 60 L AR +L K++A+ G + +V+IQEAGLDGFW+HR+LE+EGIES+VVDPASIATS RR Sbjct: 58 LLARLAELQRKAKARAGSGFRVVSIQEAGLDGFWIHRILEREGIESYVVDPASIATSRRR 117 Query: 61 RRAKTDRIDGEALLRTLMAYKRGEPRVCAMVRAPSPEEEDRRRICRERKALIVERVAHVN 120 RRAKTD IDGEAL+R L+AYKRGEPRVCAM+R P+PEEEDRRR+ RERK L ERV HVN Sbjct: 118 RRAKTDEIDGEALVRALLAYKRGEPRVCAMLRVPTPEEEDRRRLVRERKTLTNERVRHVN 177 Query: 121 RLKGLLFSQGITNYEPLRKDRRERLAELRTGDGRMLPAHMKAQICRELDRLELLLEQIRA 180 R+KGLLF QG+ Y+PL +DRR+RL EL TGDGR LP +KAQI RELDR+ELL+EQI+ Sbjct: 178 RVKGLLFGQGVCGYQPLNRDRRKRLEELVTGDGRPLPPALKAQISRELDRIELLIEQIKD 237 Query: 181 VEDERDTLIAAQAATATPSPVTMLINLKGIGAEFAAILWSEGLFRRFDNRRQVAAYAGLA 240 +E R+ ++ A A T++P+P +L+NLKGIG +FAA++WSEGL R FDNRRQVAAYAGLA Sbjct: 238 IEKTREAMMVA-AGTSSPAP-ALLLNLKGIGPQFAAVIWSEGLSRHFDNRRQVAAYAGLA 295 Query: 241 PTPWQSGSIDREQGVSKAGNPRLRATLIQMAWLWLRHQPNSALAQWFNERVRRSG 295 PTPWQSG +DR+QGVSK+GNPRLR TLIQ+AWLWLRHQP+SAL WF ERV ++G Sbjct: 296 PTPWQSGKVDRDQGVSKSGNPRLRTTLIQLAWLWLRHQPDSALTAWFKERVTQNG 350 >ref|YP_579127.1| transposase IS116/IS110/IS902 [Nitrobacter hamburgensis X14] gb|ABE64667.1| transposase IS116/IS110/IS902 [Nitrobacter hamburgensis X14] Length = 417 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 209/296 (70%), Positives = 244/296 (82%), Gaps = 2/296 (0%) Query: 1 LFARFLKLSEKSRAKTGHTYPIVTIQEAGLDGFWVHRVLEKEG-IESHVVDPASIATSSR 59 LF RF L EK++A+TG YP+V I+EAGLDGFW+ R L +E IESHVVD ASIA S R Sbjct: 86 LFVRFGVLREKAQARTGKLYPLVVIEEAGLDGFWIDRRLRREDWIESHVVDAASIAVSRR 145 Query: 60 RRRAKTDRIDGEALLRTLMAYKRGEPRVCAMVRAPSPEEEDRRRICRERKALIVERVAHV 119 RRR KTD+IDGE L+RTL+AYKRGEPRVC+MVR P+ +EEDRRR CRERK L+ ER H+ Sbjct: 146 RRRVKTDKIDGETLVRTLLAYKRGEPRVCSMVRVPTLKEEDRRRTCRERKTLVGERTLHI 205 Query: 120 NRLKGLLFSQGITNYEPLRKDRRERLAELRTGDGRMLPAHMKAQICRELDRLELLLEQIR 179 NR+KGLLF QGIT Y PL +DRRERL ELRTGDG LP H+KAQICRELDRLELL+EQI+ Sbjct: 206 NRIKGLLFGQGITGYAPLHRDRRERLEELRTGDGDALPGHLKAQICRELDRLELLIEQIK 265 Query: 180 AVEDERDTLIAAQAATATPSPVTMLINLKGIGAEFAAILWSEGLFRRFDNRRQVAAYAGL 239 VE ERD L+ A+ PS ML ++GIG EFAAIL++EGL+R FDNRRQ+AAYAGL Sbjct: 266 TVEVERDALL-AEKREDMPSSAAMLREIRGIGPEFAAILYAEGLYRHFDNRRQLAAYAGL 324 Query: 240 APTPWQSGSIDREQGVSKAGNPRLRATLIQMAWLWLRHQPNSALAQWFNERVRRSG 295 APTPW+SGSIDREQGVSKAGNPRLR T++Q++WLWLR QP+SALA WF ERVRR+G Sbjct: 325 APTPWRSGSIDREQGVSKAGNPRLRTTMVQLSWLWLRQQPDSALACWFQERVRRNG 380 >ref|NP_659850.1| insertion sequence transposase protein [Rhizobium etli CFN 42] ref|YP_471727.1| putative insertion sequence transposase protein [Rhizobium etli CFN 42] gb|AAM54863.1| probable insertion sequence transposase protein [Rhizobium etli CFN 42] gb|ABC93000.1| putative insertion sequence transposase protein [Rhizobium etli CFN 42] Length = 388 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 214/297 (72%), Positives = 254/297 (85%), Gaps = 2/297 (0%) Query: 1 LFARFLKLSEKSRAKTGHTYPIVTIQEAGLDGFWVHRVLEKEGIESHVVDPASIATSSRR 60 L RF +L +K+R +TG +PIVTIQEAGLDGFW+HRVLE GIES+VVD ASIATS RR Sbjct: 55 LLDRFEQLQQKARLRTGKLFPIVTIQEAGLDGFWIHRVLETHGIESYVVDAASIATSRRR 114 Query: 61 RRAKTDRIDGEALLRTLMAYKRGEPRVCAMVRAPSPEEEDRRRICRERKALIVERVAHVN 120 RRAKTD+IDGEAL RTL+A+KRGEPRVCAMVRAP P++EDRRRICRERK LI ERV HVN Sbjct: 115 RRAKTDKIDGEALTRTLLAFKRGEPRVCAMVRAPDPKDEDRRRICRERKVLIAERVRHVN 174 Query: 121 RLKGLLFSQGITNYEPLRKDRRERLAELRTGDGRMLPAHMKAQICRELDRLELLLEQIRA 180 R+KGLLF+QG++ Y+PLRKDRR+RL EL+TGDGR LP H+KAQI RELDRLELLLEQI A Sbjct: 175 RVKGLLFAQGVSGYQPLRKDRRQRLEELQTGDGRELPKHLKAQINRELDRLELLLEQIAA 234 Query: 181 VEDERDTLIAA--QAATATPSPVTMLINLKGIGAEFAAILWSEGLFRRFDNRRQVAAYAG 238 VE ER++L++ Q A SP ML++LKG+GAEFAA+LW+E L R FDNRRQ+AAYAG Sbjct: 235 VESERNSLLSMDEQPAVEATSPAAMLLSLKGVGAEFAAVLWTEALSRHFDNRRQIAAYAG 294 Query: 239 LAPTPWQSGSIDREQGVSKAGNPRLRATLIQMAWLWLRHQPNSALAQWFNERVRRSG 295 L PTPW SG+ID EQGVSKAGNPRLR T+IQ++WLWLR+QP SAL++WF +RV+ +G Sbjct: 295 LTPTPWMSGTIDHEQGVSKAGNPRLRTTMIQLSWLWLRNQPASALSRWFVDRVQSNG 351 >ref|YP_004534926.1| Y4rJ [Novosphingobium sp. PP1Y] emb|CCA93108.1| Y4rJ [Novosphingobium sp. PP1Y] Length = 401 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/292 (76%), Positives = 258/292 (88%), Gaps = 1/292 (0%) Query: 1 LFARFLKLSEKSRAKTGHTYPIVTIQEAGLDGFWVHRVLEKEGIESHVVDPASIATSSRR 60 L ARF +L K++A+TG ++PI+ IQEAGLDGFW+HRVL KEGI+SHVVDPASIATS RR Sbjct: 58 LLARFTQLQAKAQARTGRSFPIIVIQEAGLDGFWIHRVLRKEGIKSHVVDPASIATSRRR 117 Query: 61 RRAKTDRIDGEALLRTLMAYKRGEPRVCAMVRAPSPEEEDRRRICRERKALIVERVAHVN 120 RRAKTDRIDGEAL+R L+AYKRGEPRVCAMVR P+PEEEDRRRICRERK LI +R+ H N Sbjct: 118 RRAKTDRIDGEALVRALLAYKRGEPRVCAMVRVPTPEEEDRRRICRERKVLIADRIRHAN 177 Query: 121 RLKGLLFSQGITNYEPLRKDRRERLAELRTGDGRMLPAHMKAQICRELDRLELLLEQIRA 180 R+KGLLF++G+T Y+PLR+DRRERL +L TGDGR LP H+K QI RELDRLELLLEQIRA Sbjct: 178 RIKGLLFARGVTGYQPLRRDRRERLEKLMTGDGRPLPMHLKVQIGRELDRLELLLEQIRA 237 Query: 181 VEDERDTLIAAQAATATPSPVTMLINLKGIGAEFAAILWSEGLFRRFDNRRQVAAYAGLA 240 VE ERD L+AA+ TA P+P ML+++KGIG EFAAILWSEGLFR F NRR+VAAYAGLA Sbjct: 238 VEAERDALLAAE-TTAMPAPAAMLLDIKGIGPEFAAILWSEGLFRHFSNRREVAAYAGLA 296 Query: 241 PTPWQSGSIDREQGVSKAGNPRLRATLIQMAWLWLRHQPNSALAQWFNERVR 292 PTPWQSGS+DREQGVSKAGNPRLR TLIQ+AWLWLR+QP SALAQW+ +RVR Sbjct: 297 PTPWQSGSVDREQGVSKAGNPRLRTTLIQLAWLWLRNQPESALAQWYQQRVR 348