BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0178.0002.p         (115 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001236788.1| hypothetical protein BBta_0610 [Bradyrhizobi...   232   2e-59
ref|YP_779951.1| IS66 Orf2 family protein [Rhodopseudomonas palu...   227   5e-58
ref|ZP_01225914.1| IS66 orf2 like protein [Aurantimonas manganox...   187   4e-46
gb|AEH82403.1| probabable insertion sequence transposase protein...   185   2e-45
ref|ZP_04679718.1| transposon-related protein [Ochrobactrum inte...   185   2e-45

>ref|YP_001236788.1| hypothetical protein BBta_0610 [Bradyrhizobium sp. BTAi1]
 ref|YP_001242184.1| hypothetical protein BBta_6362 [Bradyrhizobium sp. BTAi1]
 gb|ABQ32882.1| hypothetical protein BBta_0610 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38278.1| hypothetical protein BBta_6362 [Bradyrhizobium sp. BTAi1]
          Length = 115

 Score =  232 bits (591), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 113/115 (98%), Positives = 114/115 (99%)

Query: 1   MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLKRDPHAGDLYVFRGRRGDLIKIIWHD 60
           MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLKRDPH GDLYVFRGRRGDLIKIIWHD
Sbjct: 1   MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLKRDPHVGDLYVFRGRRGDLIKIIWHD 60

Query: 61  GQGACLFTKRLERGRFLWPSLADGVVTISVAQLSYLLSGIDWRMPQATWRPQASG 115
           GQGACLFTKRLERGRFLWPS+ADGVVTISVAQLSYLLSGIDWRMPQATWRPQASG
Sbjct: 61  GQGACLFTKRLERGRFLWPSVADGVVTISVAQLSYLLSGIDWRMPQATWRPQASG 115


>ref|YP_779951.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
 ref|YP_780065.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
 ref|YP_781355.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
 ref|YP_782427.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
 ref|YP_782919.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
 gb|ABJ04971.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
 gb|ABJ05085.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
 gb|ABJ06375.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
 gb|ABJ07447.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
 gb|ABJ07939.1| IS66 Orf2 family protein [Rhodopseudomonas palustris BisA53]
          Length = 115

 Score =  227 bits (578), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 110/115 (95%), Positives = 113/115 (98%)

Query: 1   MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLKRDPHAGDLYVFRGRRGDLIKIIWHD 60
           MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESL+RDPH GDLYVFRGRRGDLIKIIWHD
Sbjct: 1   MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLQRDPHVGDLYVFRGRRGDLIKIIWHD 60

Query: 61  GQGACLFTKRLERGRFLWPSLADGVVTISVAQLSYLLSGIDWRMPQATWRPQASG 115
           GQGACLFTKRLERGRFLWPSLADGVVTISVAQLSYLLSGIDWRMP+ TWRPQA+G
Sbjct: 61  GQGACLFTKRLERGRFLWPSLADGVVTISVAQLSYLLSGIDWRMPRETWRPQATG 115


>ref|ZP_01225914.1| IS66 orf2 like protein [Aurantimonas manganoxydans SI85-9A1]
 gb|EAS51325.1| IS66 orf2 like protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 115

 Score =  187 bits (476), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 89/115 (77%), Positives = 97/115 (84%)

Query: 1   MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLKRDPHAGDLYVFRGRRGDLIKIIWHD 60
           MI +P  VRVWLATGH DMR+GFP L+ LVQE+LKRDP +G L+VFRGRRGDLIK+IWHD
Sbjct: 1   MIPVPSGVRVWLATGHVDMRKGFPGLSLLVQETLKRDPASGHLFVFRGRRGDLIKVIWHD 60

Query: 61  GQGACLFTKRLERGRFLWPSLADGVVTISVAQLSYLLSGIDWRMPQATWRPQASG 115
           GQGACLF KRLERGRF+WPS ADG VTIS AQL YLL GIDWR PQ TWRP A G
Sbjct: 61  GQGACLFVKRLERGRFIWPSPADGAVTISPAQLGYLLEGIDWRHPQRTWRPSAGG 115


>gb|AEH82403.1| probabable insertion sequence transposase protein [Sinorhizobium
           meliloti SM11]
          Length = 115

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 85/115 (73%), Positives = 98/115 (85%)

Query: 1   MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLKRDPHAGDLYVFRGRRGDLIKIIWHD 60
           MI +P  VRVWLATG+TDMRRGFP L+ +VQE+LKRDP +G L+VFRGR G LIK+IWHD
Sbjct: 1   MIPVPSGVRVWLATGYTDMRRGFPGLSLMVQETLKRDPMSGHLFVFRGRSGGLIKVIWHD 60

Query: 61  GQGACLFTKRLERGRFLWPSLADGVVTISVAQLSYLLSGIDWRMPQATWRPQASG 115
           GQGACLFTK+LERGRF+WPS ADG V I+ AQL YLL GIDWRMPQ TWRP ++G
Sbjct: 61  GQGACLFTKKLERGRFIWPSAADGTVVITPAQLGYLLEGIDWRMPQKTWRPSSAG 115


>ref|ZP_04679718.1| transposon-related protein [Ochrobactrum intermedium LMG 3301]
 gb|EEQ95224.1| transposon-related protein [Ochrobactrum intermedium LMG 3301]
          Length = 121

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/115 (73%), Positives = 97/115 (84%)

Query: 1   MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLKRDPHAGDLYVFRGRRGDLIKIIWHD 60
           MI +P  V+VWLATGHTDMR+GFP L+ +VQE+LKRDP  G L+VFRGR G LIK+IWHD
Sbjct: 7   MIPVPAGVKVWLATGHTDMRKGFPGLSLMVQEALKRDPMCGHLFVFRGRGGGLIKVIWHD 66

Query: 61  GQGACLFTKRLERGRFLWPSLADGVVTISVAQLSYLLSGIDWRMPQATWRPQASG 115
           GQGACLFTK+LERGRF+WPS ADG V I+ AQL YLL GIDWRMPQ TWRP ++G
Sbjct: 67  GQGACLFTKKLERGRFIWPSAADGTVVITPAQLGYLLEGIDWRMPQKTWRPTSAG 121