BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0177.0021.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001993157.1| urease accessory protein UreD [Rhodopseudomo...   205   2e-51
ref|YP_004108036.1| Urease accessory protein UreD [Rhodopseudomo...   205   2e-51
sp|Q6N3M9.2|URED_RHOPA RecName: Full=Urease accessory protein ureD    203   7e-51
ref|NP_949002.1| urease accessory protein UreD [Rhodopseudomonas...   202   1e-50
ref|YP_001203187.1| putative urease accessory protein UreD [Brad...   199   9e-50

>ref|YP_001993157.1| urease accessory protein UreD [Rhodopseudomonas palustris TIE-1]
 gb|ACF02682.1| Urease accessory protein UreD [Rhodopseudomonas palustris TIE-1]
          Length = 305

 Score =  205 bits (522), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 98/126 (77%), Positives = 111/126 (88%)

Query: 1   VFGRAAMGETMRHGEFVDRWRMRRGGRLVFAETIRLDGEIGEKLARPAIAGGGCAIGTTL 60
           +FGR+AMGETM+HG FVDRWRMRRGG+LVFAET+RLDGEIG    RPA+  GG AIGT L
Sbjct: 180 IFGRSAMGETMQHGRFVDRWRMRRGGKLVFAETVRLDGEIGSLFGRPAVMNGGVAIGTAL 239

Query: 61  IVPGDEALVARIREASDSFGGEVGISAWNGFAMARFCAQDAARLRADMMTVLGRASAVPL 120
           IVPGD ALV R+REA+D+FG EVGISAWNGFAMARFCAQ+AA+LRADMMTVLGRA+   L
Sbjct: 240 IVPGDAALVERLREAADTFGAEVGISAWNGFAMARFCAQNAAKLRADMMTVLGRAAGRAL 299

Query: 121 PRLWLN 126
           PRLWL+
Sbjct: 300 PRLWLS 305


>ref|YP_004108036.1| Urease accessory protein UreD [Rhodopseudomonas palustris DX-1]
 gb|ADU43303.1| Urease accessory protein UreD [Rhodopseudomonas palustris DX-1]
          Length = 278

 Score =  205 bits (521), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 98/126 (77%), Positives = 112/126 (88%)

Query: 1   VFGRAAMGETMRHGEFVDRWRMRRGGRLVFAETIRLDGEIGEKLARPAIAGGGCAIGTTL 60
           +FGR+AMGETM+HG FVDRWRMRRGG+LVFAET+RLDGEIG+ LARPA+A  G AIGT L
Sbjct: 153 IFGRSAMGETMQHGHFVDRWRMRRGGKLVFAETVRLDGEIGDLLARPAVAKAGVAIGTAL 212

Query: 61  IVPGDEALVARIREASDSFGGEVGISAWNGFAMARFCAQDAARLRADMMTVLGRASAVPL 120
           IVPGD ALV R+REA+D  G E+GISAWNGFAMARFCAQ+AA+LRADMMTVLGRA+   L
Sbjct: 213 IVPGDAALVERLREAADRSGAELGISAWNGFAMARFCAQNAAKLRADMMTVLGRAAGRAL 272

Query: 121 PRLWLN 126
           PRLWL+
Sbjct: 273 PRLWLS 278


>sp|Q6N3M9.2|URED_RHOPA RecName: Full=Urease accessory protein ureD
          Length = 279

 Score =  203 bits (516), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 96/126 (76%), Positives = 110/126 (87%)

Query: 1   VFGRAAMGETMRHGEFVDRWRMRRGGRLVFAETIRLDGEIGEKLARPAIAGGGCAIGTTL 60
           +FGR+AMGETM+HG FVDRWRMRRGG+LVFAET+RLDG+I     RPA+  GG AIGT L
Sbjct: 154 IFGRSAMGETMQHGRFVDRWRMRRGGKLVFAETVRLDGDIASLFGRPAVLNGGVAIGTAL 213

Query: 61  IVPGDEALVARIREASDSFGGEVGISAWNGFAMARFCAQDAARLRADMMTVLGRASAVPL 120
           IVPGD ALV R+REA+D+FG EVGISAWNGFAMARFCAQ+AARLRADMMT+LGRA+   L
Sbjct: 214 IVPGDAALVERLREAADTFGAEVGISAWNGFAMARFCAQNAARLRADMMTILGRAAGRAL 273

Query: 121 PRLWLN 126
           PRLWL+
Sbjct: 274 PRLWLS 279


>ref|NP_949002.1| urease accessory protein UreD [Rhodopseudomonas palustris CGA009]
 emb|CAE29105.1| possible urease accessory protein D [Rhodopseudomonas palustris
           CGA009]
          Length = 305

 Score =  202 bits (515), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 96/126 (76%), Positives = 110/126 (87%)

Query: 1   VFGRAAMGETMRHGEFVDRWRMRRGGRLVFAETIRLDGEIGEKLARPAIAGGGCAIGTTL 60
           +FGR+AMGETM+HG FVDRWRMRRGG+LVFAET+RLDG+I     RPA+  GG AIGT L
Sbjct: 180 IFGRSAMGETMQHGRFVDRWRMRRGGKLVFAETVRLDGDIASLFGRPAVLNGGVAIGTAL 239

Query: 61  IVPGDEALVARIREASDSFGGEVGISAWNGFAMARFCAQDAARLRADMMTVLGRASAVPL 120
           IVPGD ALV R+REA+D+FG EVGISAWNGFAMARFCAQ+AARLRADMMT+LGRA+   L
Sbjct: 240 IVPGDAALVERLREAADTFGAEVGISAWNGFAMARFCAQNAARLRADMMTILGRAAGRAL 299

Query: 121 PRLWLN 126
           PRLWL+
Sbjct: 300 PRLWLS 305


>ref|YP_001203187.1| putative urease accessory protein UreD [Bradyrhizobium sp. ORS 278]
 sp|A4YM24.1|URED1_BRASO RecName: Full=Urease accessory protein ureD 1
 emb|CAL74950.1| Putative urease accessory protein UreD [Bradyrhizobium sp. ORS 278]
          Length = 278

 Score =  199 bits (507), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 100/126 (79%), Positives = 109/126 (86%)

Query: 1   VFGRAAMGETMRHGEFVDRWRMRRGGRLVFAETIRLDGEIGEKLARPAIAGGGCAIGTTL 60
           VFGR AMGE MR GEFVDRWR+RRGG+LVFAET+RLDG+IG+KLA+PAIA G  AIGT L
Sbjct: 153 VFGRTAMGERMREGEFVDRWRLRRGGKLVFAETVRLDGDIGDKLAQPAIANGATAIGTAL 212

Query: 61  IVPGDEALVARIREASDSFGGEVGISAWNGFAMARFCAQDAARLRADMMTVLGRASAVPL 120
           IVPGD ALV RIRE+  +  GE G+SAWNGFAMARFCAQDAA LRADMM VLG ASAVPL
Sbjct: 213 IVPGDGALVERIRESLPASRGEAGLSAWNGFAMARFCAQDAASLRADMMAVLGCASAVPL 272

Query: 121 PRLWLN 126
           PRLWLN
Sbjct: 273 PRLWLN 278