BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0176.0027.p (246 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_487684.1| AMP-dependent synthetase and ligase [Rhodopseud... 429 e-118 ref|YP_004108469.1| AMP-dependent synthetase and ligase [Rhodops... 426 e-117 ref|NP_948638.1| putative long-chain-fatty-acid CoA ligase [Rhod... 421 e-116 ref|YP_001992695.1| AMP-dependent synthetase and ligase [Rhodops... 421 e-116 ref|YP_570938.1| AMP-dependent synthetase and ligase [Rhodopseud... 415 e-114 >ref|YP_487684.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris HaA2] gb|ABD08773.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris HaA2] Length = 518 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 208/246 (84%), Positives = 219/246 (89%) Query: 1 LKRISYGASVISDAVLMRAMKALPHVEFTQAYGMTELSPIATLLHWKEHIGDGRAKGRHR 60 LK I YGAS IS+AVL RA ALPHV+FTQAYGMTELSPIATLLHWKEHIGDG+AKGR R Sbjct: 273 LKNIIYGASPISEAVLARASAALPHVQFTQAYGMTELSPIATLLHWKEHIGDGKAKGRQR 332 Query: 61 GAGRATLGAEVKIVDAEDKVAPTGTVGEIAVRGDMVMMGYWERPEETARAVIDGWMHTGD 120 AGRATLG EV+IVDA+D+ P GTVGEI VRGD VMMGYWERPEETARA+ GWMHTGD Sbjct: 333 AAGRATLGCEVRIVDADDQPVPYGTVGEICVRGDNVMMGYWERPEETARALAGGWMHTGD 392 Query: 121 GGYMDEDGFVYVVDRVKDMIISGGENVYSAEVENALAQHAAVAQCAVIGIPSERWGEQVH 180 GGYMDE GFVYVVDRVKDMIISGGENVYS EVENA+AQH AVAQCAVIGIP E WGEQVH Sbjct: 393 GGYMDEHGFVYVVDRVKDMIISGGENVYSVEVENAVAQHPAVAQCAVIGIPHEAWGEQVH 452 Query: 181 AVVVMKGGASATPEELMEHCKALIAGYKCPRSVDITATPLPLSGAGKILKRELRKPYWEN 240 AVVV K GAS T +EL+ HCKALIAGYKCPRSVDIT TPLPLSGAGKILKRELR+PYWEN Sbjct: 453 AVVVTKAGASVTADELIAHCKALIAGYKCPRSVDITETPLPLSGAGKILKRELRQPYWEN 512 Query: 241 RERRVS 246 RERRVS Sbjct: 513 RERRVS 518 >ref|YP_004108469.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris DX-1] gb|ADU43736.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris DX-1] Length = 518 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 206/246 (83%), Positives = 220/246 (89%) Query: 1 LKRISYGASVISDAVLMRAMKALPHVEFTQAYGMTELSPIATLLHWKEHIGDGRAKGRHR 60 LK I YGAS IS+AVL RA ALP+V+FTQAYGMTELSPIATLLHWKEHIGDG+AKGR R Sbjct: 273 LKNIVYGASPISEAVLARASAALPNVQFTQAYGMTELSPIATLLHWKEHIGDGKAKGRQR 332 Query: 61 GAGRATLGAEVKIVDAEDKVAPTGTVGEIAVRGDMVMMGYWERPEETARAVIDGWMHTGD 120 AGRATLG EV+IVDAED+ P GTVGEI VRGD VMMGYWERPEETARA++ GWMHTGD Sbjct: 333 AAGRATLGCEVRIVDAEDRTVPYGTVGEICVRGDNVMMGYWERPEETARALLGGWMHTGD 392 Query: 121 GGYMDEDGFVYVVDRVKDMIISGGENVYSAEVENALAQHAAVAQCAVIGIPSERWGEQVH 180 GGYMDE GFVYVVDRVKDMIISGGENVYS EVENA+AQH AVAQCAVIGIP E WGEQVH Sbjct: 393 GGYMDEHGFVYVVDRVKDMIISGGENVYSVEVENAVAQHPAVAQCAVIGIPHEAWGEQVH 452 Query: 181 AVVVMKGGASATPEELMEHCKALIAGYKCPRSVDITATPLPLSGAGKILKRELRKPYWEN 240 AVVV K GA+ T +EL+ HCKALIAGYKCPRSV+IT TPLPLSGAGKILKRELR+PYWEN Sbjct: 453 AVVVTKAGATVTADELIAHCKALIAGYKCPRSVEITETPLPLSGAGKILKRELRQPYWEN 512 Query: 241 RERRVS 246 RERRVS Sbjct: 513 RERRVS 518 >ref|NP_948638.1| putative long-chain-fatty-acid CoA ligase [Rhodopseudomonas palustris CGA009] emb|CAE28740.1| putative long-chain-fatty-acid CoA ligase [Rhodopseudomonas palustris CGA009] Length = 518 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 204/246 (82%), Positives = 219/246 (89%) Query: 1 LKRISYGASVISDAVLMRAMKALPHVEFTQAYGMTELSPIATLLHWKEHIGDGRAKGRHR 60 LK I YGAS IS+AVL RA ALP+V+FTQAYGMTELSPIATLLHWKEHIG+G+AKGR R Sbjct: 273 LKNIVYGASPISEAVLARASAALPNVQFTQAYGMTELSPIATLLHWKEHIGEGKAKGRQR 332 Query: 61 GAGRATLGAEVKIVDAEDKVAPTGTVGEIAVRGDMVMMGYWERPEETARAVIDGWMHTGD 120 AGRATLG EV+IVDA+D+ P GTVGEI VRGD VMMGYWERPEETARA+ GWMHTGD Sbjct: 333 AAGRATLGCEVRIVDADDRTVPYGTVGEICVRGDNVMMGYWERPEETARALAGGWMHTGD 392 Query: 121 GGYMDEDGFVYVVDRVKDMIISGGENVYSAEVENALAQHAAVAQCAVIGIPSERWGEQVH 180 GGYMDE GFVYVVDRVKDMIISGGENVYS EVENA+AQH AVAQCAVIGIP E WGEQVH Sbjct: 393 GGYMDEHGFVYVVDRVKDMIISGGENVYSVEVENAVAQHPAVAQCAVIGIPHEAWGEQVH 452 Query: 181 AVVVMKGGASATPEELMEHCKALIAGYKCPRSVDITATPLPLSGAGKILKRELRKPYWEN 240 AVVV K GA+ T EEL+ HCKALIAGYKCPRSV+IT TPLPLSGAGKILKRELR+PYWE+ Sbjct: 453 AVVVTKAGATVTAEELIAHCKALIAGYKCPRSVEITETPLPLSGAGKILKRELRQPYWES 512 Query: 241 RERRVS 246 RERRVS Sbjct: 513 RERRVS 518 >ref|YP_001992695.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris TIE-1] gb|ACF02220.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris TIE-1] Length = 518 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 204/246 (82%), Positives = 219/246 (89%) Query: 1 LKRISYGASVISDAVLMRAMKALPHVEFTQAYGMTELSPIATLLHWKEHIGDGRAKGRHR 60 LK I YGAS IS+AVL RA ALP+V+FTQAYGMTELSPIATLLHWKEHIG+G+AKGR R Sbjct: 273 LKNIVYGASPISEAVLARASAALPNVQFTQAYGMTELSPIATLLHWKEHIGEGKAKGRQR 332 Query: 61 GAGRATLGAEVKIVDAEDKVAPTGTVGEIAVRGDMVMMGYWERPEETARAVIDGWMHTGD 120 AGRATLG EV+IVDA+D+ P GTVGEI VRGD VMMGYWERPEETARA+ GWMHTGD Sbjct: 333 AAGRATLGCEVRIVDADDRTVPYGTVGEICVRGDNVMMGYWERPEETARALAGGWMHTGD 392 Query: 121 GGYMDEDGFVYVVDRVKDMIISGGENVYSAEVENALAQHAAVAQCAVIGIPSERWGEQVH 180 GGYMDE GFVYVVDRVKDMIISGGENVYS EVENA+AQH AVAQCAVIGIP E WGEQVH Sbjct: 393 GGYMDEHGFVYVVDRVKDMIISGGENVYSVEVENAVAQHPAVAQCAVIGIPHEAWGEQVH 452 Query: 181 AVVVMKGGASATPEELMEHCKALIAGYKCPRSVDITATPLPLSGAGKILKRELRKPYWEN 240 AVVV K GA+ T EEL+ HCKALIAGYKCPRSV+IT TPLPLSGAGKILKRELR+PYWE+ Sbjct: 453 AVVVTKAGATVTAEELIAHCKALIAGYKCPRSVEITETPLPLSGAGKILKRELRQPYWES 512 Query: 241 RERRVS 246 RERRVS Sbjct: 513 RERRVS 518 >ref|YP_570938.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris BisB5] gb|ABE41037.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris BisB5] Length = 518 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/246 (82%), Positives = 216/246 (87%) Query: 1 LKRISYGASVISDAVLMRAMKALPHVEFTQAYGMTELSPIATLLHWKEHIGDGRAKGRHR 60 LK I+YGAS IS+AVL RA ALP V+FTQAYGMTELSPIATLLHWKEHIG+G+AKGR R Sbjct: 273 LKNITYGASPISEAVLARASAALPDVQFTQAYGMTELSPIATLLHWKEHIGEGKAKGRQR 332 Query: 61 GAGRATLGAEVKIVDAEDKVAPTGTVGEIAVRGDMVMMGYWERPEETARAVIDGWMHTGD 120 AG A LG EV+IVDA+D P GTVGEI VRGD VMMGYWERPEETARA+ GWMHTGD Sbjct: 333 AAGCAALGCEVRIVDADDTPLPHGTVGEICVRGDNVMMGYWERPEETARALAGGWMHTGD 392 Query: 121 GGYMDEDGFVYVVDRVKDMIISGGENVYSAEVENALAQHAAVAQCAVIGIPSERWGEQVH 180 GGYMDE GFV+VVDRVKDMIISGGENVYS EVENA+AQH AVAQCAVIGIP E WGEQVH Sbjct: 393 GGYMDEHGFVFVVDRVKDMIISGGENVYSVEVENAVAQHPAVAQCAVIGIPHEAWGEQVH 452 Query: 181 AVVVMKGGASATPEELMEHCKALIAGYKCPRSVDITATPLPLSGAGKILKRELRKPYWEN 240 AVVV K GA+ T +EL+ HCKALIAGYKCPRSVDIT TPLPLSGAGKILKRELR+PYWEN Sbjct: 453 AVVVTKAGATVTADELIAHCKALIAGYKCPRSVDITETPLPLSGAGKILKRELRQPYWEN 512 Query: 241 RERRVS 246 RERRVS Sbjct: 513 RERRVS 518