BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0176.0019.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773617.1| transcriptional regulator [Bradyrhizobium japon... 373 e-101 gb|AEG06407.1| transcriptional regulator, GntR family with amino... 363 1e-98 gb|AEH81649.1| transcriptional regulatory protein [Sinorhizobium... 355 4e-96 ref|ZP_03569100.1| transcriptional regulator, GntR family [Burkh... 341 7e-92 ref|YP_003609778.1| GntR family transcriptional regulator [Burkh... 340 2e-91 >ref|NP_773617.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC52242.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 489 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 192/274 (70%), Positives = 220/274 (80%) Query: 2 RVLGLEGRRVWMEDPGFPLTRKGLELARLEVVPIPVDANGVDVEYGLKHAPDAALAVVTP 61 RVLGLE RRVWMEDPGFP+TR GLELA L + PIPVDA+G+DV YGL H PDAAL VVTP Sbjct: 212 RVLGLERRRVWMEDPGFPITRHGLELAGLSLAPIPVDADGIDVSYGLNHEPDAALVVVTP 271 Query: 62 GQQAPLGPPLSPKRRAQLLDWAAQSGAVIIEDDYLGELQLDGRAAPALASLDRAGRVIHL 121 GQQAPLG LS +RR +LLDWAAQ GA +IEDDYL ELQL GRA PALASLDRAGRVIH+ Sbjct: 272 GQQAPLGCTLSLERRLRLLDWAAQKGAWVIEDDYLSELQLKGRATPALASLDRAGRVIHI 331 Query: 122 GSFSKTISPTLRLGFLVAPEPLAAQFADVATCLVPAPGPAVQLSTAEFMRDGHYIRHLRR 181 GSFSKT++PTLRLGFLVAP L +QFA+VA CL PAPGP+VQL+TA+FMRDGHY+RHLRR Sbjct: 332 GSFSKTLTPTLRLGFLVAPPSLTSQFAEVAACLAPAPGPSVQLATAKFMRDGHYMRHLRR 391 Query: 182 TKRAYCDRRDALTTALRSWSNDARVAGLAVMLTLPDKTADVEIARALLAHGLAPAPLSPW 241 TKR Y R DAL LR + D +AGLAV++ LPD T D+ IAR +L+ GLAPAPLSPW Sbjct: 392 TKRVYAARGDALLKTLRPRAKDITIAGLAVLMQLPDGTPDLSIAREMLSFGLAPAPLSPW 451 Query: 242 YVSPKRAQPGLLLGIATVPDRGVPAACRRLFEAI 275 Y A+ GLLLGIAT P++ + A+C RL I Sbjct: 452 YAEAASARSGLLLGIATAPNKRLAASCDRLLGII 485 >gb|AEG06407.1| transcriptional regulator, GntR family with aminotransferase domain [Sinorhizobium meliloti BL225C] Length = 474 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 189/277 (68%), Positives = 218/277 (78%) Query: 2 RVLGLEGRRVWMEDPGFPLTRKGLELARLEVVPIPVDANGVDVEYGLKHAPDAALAVVTP 61 RVL LEGR+ WMEDPGFP TR+GLELARL + PIP+DA+G+DV +G HAPDA L VVT Sbjct: 191 RVLALEGRKAWMEDPGFPFTRRGLELARLSLAPIPIDADGIDVSHGFHHAPDAGLVVVTA 250 Query: 62 GQQAPLGPPLSPKRRAQLLDWAAQSGAVIIEDDYLGELQLDGRAAPALASLDRAGRVIHL 121 GQQAPLGP LS RR +LLDWAAQ+ A +IEDDYL ELQL+GRAAPALASLDRAGRV+H+ Sbjct: 251 GQQAPLGPTLSLVRRLRLLDWAAQTQAWVIEDDYLSELQLNGRAAPALASLDRAGRVVHI 310 Query: 122 GSFSKTISPTLRLGFLVAPEPLAAQFADVATCLVPAPGPAVQLSTAEFMRDGHYIRHLRR 181 GSFSKTISP LRLGFLVAP L ++FA+VA CL P PGPAVQL+TAEF+RDGHY+RHLRR Sbjct: 311 GSFSKTISPALRLGFLVAPPALVSRFAEVAACLAPPPGPAVQLATAEFIRDGHYMRHLRR 370 Query: 182 TKRAYCDRRDALTTALRSWSNDARVAGLAVMLTLPDKTADVEIARALLAHGLAPAPLSPW 241 TKR Y +RDAL L S + +A VAGLAV++ LPD DV IAR LA G+APAPLS W Sbjct: 371 TKRVYSAQRDALLKCLPSNAGEAVVAGLAVLVRLPDGAPDVAIARETLAFGMAPAPLSVW 430 Query: 242 YVSPKRAQPGLLLGIATVPDRGVPAACRRLFEAIRAQ 278 Y SP A+ GLLLG+AT P R + +C RL I A Sbjct: 431 YASPNSAKSGLLLGLATAPQRHLARSCDRLLGIIEAS 467 >gb|AEH81649.1| transcriptional regulatory protein [Sinorhizobium meliloti SM11] Length = 474 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 185/272 (68%), Positives = 213/272 (78%) Query: 7 EGRRVWMEDPGFPLTRKGLELARLEVVPIPVDANGVDVEYGLKHAPDAALAVVTPGQQAP 66 EGR+ WMEDPGFP TR+GLELARL + IP DA+G+DV +G HAPDA L VVT GQQAP Sbjct: 196 EGRKAWMEDPGFPFTRRGLELARLSLASIPTDADGIDVSHGFHHAPDAGLVVVTAGQQAP 255 Query: 67 LGPPLSPKRRAQLLDWAAQSGAVIIEDDYLGELQLDGRAAPALASLDRAGRVIHLGSFSK 126 LGP LS RR +LLDWAAQ+ A +IEDDYL ELQL+GRAAPALASLDRAGRV+H+GSFSK Sbjct: 256 LGPTLSLVRRLRLLDWAAQTHAWVIEDDYLSELQLNGRAAPALASLDRAGRVVHIGSFSK 315 Query: 127 TISPTLRLGFLVAPEPLAAQFADVATCLVPAPGPAVQLSTAEFMRDGHYIRHLRRTKRAY 186 TISP LRLGFLVAP LA++FA+VA CL P PGPAVQL+TAEF+RDGHY+RHLRRTKR Y Sbjct: 316 TISPALRLGFLVAPPALASRFAEVAACLAPPPGPAVQLATAEFIRDGHYMRHLRRTKRVY 375 Query: 187 CDRRDALTTALRSWSNDARVAGLAVMLTLPDKTADVEIARALLAHGLAPAPLSPWYVSPK 246 +RDAL L S + +A VAGLAV++ LPD DV IAR LA G+APAPLS WY SP Sbjct: 376 SAQRDALLKCLPSNAGEAVVAGLAVLVRLPDGAPDVAIARETLAFGMAPAPLSVWYTSPN 435 Query: 247 RAQPGLLLGIATVPDRGVPAACRRLFEAIRAQ 278 A+ GLLLG+AT P R + +C RL I A Sbjct: 436 SAKSGLLLGLATAPQRQLERSCDRLLGIIEAS 467 >ref|ZP_03569100.1| transcriptional regulator, GntR family [Burkholderia multivorans CGD2M] ref|ZP_03575747.1| transcriptional regulator, GntR family [Burkholderia multivorans CGD2] gb|EEE09090.1| transcriptional regulator, GntR family [Burkholderia multivorans CGD2] gb|EEE15007.1| transcriptional regulator, GntR family [Burkholderia multivorans CGD2M] Length = 520 Score = 341 bits (875), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 168/274 (61%), Positives = 209/274 (76%) Query: 2 RVLGLEGRRVWMEDPGFPLTRKGLELARLEVVPIPVDANGVDVEYGLKHAPDAALAVVTP 61 RVLG++GR+VWME+PGF +TRKGLELARL++VP+PVDA+G++V+Y L APDAALAVVTP Sbjct: 239 RVLGIDGRKVWMEEPGFMVTRKGLELARLKIVPVPVDADGINVDYALAQAPDAALAVVTP 298 Query: 62 GQQAPLGPPLSPKRRAQLLDWAAQSGAVIIEDDYLGELQLDGRAAPALASLDRAGRVIHL 121 GQQAPLG LS +RR Q+L+WA + A IIEDDYLGELQL GR APA+ASLD RVIH+ Sbjct: 299 GQQAPLGSTLSLRRRLQMLEWARTNHAWIIEDDYLGELQLQGRPAPAMASLDEGKRVIHV 358 Query: 122 GSFSKTISPTLRLGFLVAPEPLAAQFADVATCLVPAPGPAVQLSTAEFMRDGHYIRHLRR 181 GSFSKTISP LRLGF+VAP L F++V L PAP P +QL+TAEFMR GHYIR +RR Sbjct: 359 GSFSKTISPALRLGFVVAPVELVNAFSEVTATLAPAPSPVIQLATAEFMRRGHYIRRVRR 418 Query: 182 TKRAYCDRRDALTTALRSWSNDARVAGLAVMLTLPDKTADVEIARALLAHGLAPAPLSPW 241 KR Y +RDAL LR + + AGL+V+L LPD D +I R + G+AP+PLS W Sbjct: 419 LKRLYSAQRDALCDQLRMRNAEWITAGLSVLLRLPDGAPDTKIVREAMTVGIAPSPLSAW 478 Query: 242 YVSPKRAQPGLLLGIATVPDRGVPAACRRLFEAI 275 + +P +PGLLL +AT P++ V +CRRLF+ I Sbjct: 479 FATPSWTRPGLLLSVATAPEQHVATSCRRLFDII 512 >ref|YP_003609778.1| GntR family transcriptional regulator [Burkholderia sp. CCGE1002] gb|ADG20267.1| transcriptional regulator, GntR family with aminotransferase domain [Burkholderia sp. CCGE1002] Length = 469 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 177/278 (63%), Positives = 215/278 (77%), Gaps = 8/278 (2%) Query: 2 RVLGLEGRRVWMEDPGFPLTRKGLELARLEVVPIPVDANGVDVEYGLKHAPDAALAVVTP 61 RVLGL+G++VWME+PGF +TRKGLELARL++VP+PVDA G++V YG+++A DAALAVVTP Sbjct: 192 RVLGLDGKKVWMEEPGFMVTRKGLELARLDIVPVPVDAEGLNVGYGIENAADAALAVVTP 251 Query: 62 GQQAPLGPPLSPKRRAQLLDWAAQSGAVIIEDDYLGELQLDGRAAPALASLDRAGRVIHL 121 GQQAPLG +S +RR +LL+WA +GA IIEDDYLGELQL+GR APALASLD+ RVIH+ Sbjct: 252 GQQAPLGSTMSLRRRLRLLEWAVSTGAWIIEDDYLGELQLEGRPAPALASLDKGERVIHI 311 Query: 122 GSFSKTISPTLRLGFLVAPEPLAAQFADVATCLVPAPGPAVQLSTAEFMRDGHYIRHLRR 181 GSFSKT+SP LRLGF+VAP LA F++VA L PAP P +QL+TA FM DGHYIR +RR Sbjct: 312 GSFSKTVSPGLRLGFVVAPTTLANAFSEVAATLAPAPSPVMQLATARFMHDGHYIRRVRR 371 Query: 182 TKRAYCDRRDALTTALR----SWSNDARVAGLAVMLTLPDKTADVEIARALLAHGLAPAP 237 KR Y +RDAL LR W N AGLAV+L LPD D I R + G+AP+P Sbjct: 372 LKRLYSAQRDALCEQLRMREAQWVN----AGLAVLLRLPDGVPDTPIVREAMTVGMAPSP 427 Query: 238 LSPWYVSPKRAQPGLLLGIATVPDRGVPAACRRLFEAI 275 LS W+ +P A PGLLLG+AT P+R +PAACRRLFE I Sbjct: 428 LSTWFGTPSWALPGLLLGVATAPERHLPAACRRLFEII 465