BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0176.0014.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770438.1| hypothetical protein blr3798 [Bradyrhizobium ja... 449 e-124 ref|YP_001239506.1| hypothetical protein BBta_3507 [Bradyrhizobi... 432 e-119 ref|YP_001206637.1| hypothetical protein BRADO4690 [Bradyrhizobi... 427 e-118 ref|YP_569213.1| hypothetical protein RPD_2077 [Rhodopseudomonas... 372 e-101 ref|YP_486972.1| hypothetical protein RPB_3365 [Rhodopseudomonas... 371 e-101 >ref|NP_770438.1| hypothetical protein blr3798 [Bradyrhizobium japonicum USDA 110] dbj|BAC49063.1| blr3798 [Bradyrhizobium japonicum USDA 110] Length = 255 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 218/239 (91%), Positives = 225/239 (94%) Query: 1 VTTSASAPLPASVLEALARYDTPTICNAMEIVAPERRLIGYTVKQLVCPFPTLPPMVGYA 60 VT +A+ PLPASVLEAL RYDTPTICNAMEIVAPERRLIGYT KQLVCPFP LPP+VGYA Sbjct: 17 VTDTATGPLPASVLEALGRYDTPTICNAMEIVAPERRLIGYTTKQLVCPFPDLPPIVGYA 76 Query: 61 RTTTIRSVLKSGLSAEEQSKRRIDYYEYVGTGFGPRISVIQDIDGPDVGYGAFWGEVQSN 120 RT IRSVLKS L AEEQSKRRI+YYEYVGTG GPRISVIQDIDGPDVGYGAFWGEVQSN Sbjct: 77 RTVAIRSVLKSSLPAEEQSKRRIEYYEYVGTGHGPRISVIQDIDGPDVGYGAFWGEVQSN 136 Query: 121 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTVRSDD 180 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTV+SDD Sbjct: 137 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTVKSDD 196 Query: 181 LIHADSHGAIVIPYEVAAKLPEAAELCGRRETPILDIARSKDFSLEKLKDALKRSAEIH 239 LIHAD HGAIVIP +VAAKLPEAAELCGRRETPIL+IARS DFSLEKLK ALKRSAEIH Sbjct: 197 LIHADQHGAIVIPLDVAAKLPEAAELCGRRETPILEIARSPDFSLEKLKAALKRSAEIH 255 >ref|YP_001239506.1| hypothetical protein BBta_3507 [Bradyrhizobium sp. BTAi1] gb|ABQ35600.1| hypothetical protein BBta_3507 [Bradyrhizobium sp. BTAi1] Length = 239 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/239 (86%), Positives = 223/239 (93%) Query: 1 VTTSASAPLPASVLEALARYDTPTICNAMEIVAPERRLIGYTVKQLVCPFPTLPPMVGYA 60 +T+ A+APL S+LEALARYDTPTICNAMEIVAPERRLIGYT K LVCPFP LPPMVGYA Sbjct: 1 MTSPAAAPLAPSILEALARYDTPTICNAMEIVAPERRLIGYTTKPLVCPFPDLPPMVGYA 60 Query: 61 RTTTIRSVLKSGLSAEEQSKRRIDYYEYVGTGFGPRISVIQDIDGPDVGYGAFWGEVQSN 120 RT TIRSV+KS L AEEQ++RRI YYEYVGTG GPRI+VIQDIDGPD+GYGAFWGEVQSN Sbjct: 61 RTVTIRSVVKSALPAEEQARRRIAYYEYVGTGHGPRIAVIQDIDGPDIGYGAFWGEVQSN 120 Query: 121 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTVRSDD 180 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTV SDD Sbjct: 121 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTVHSDD 180 Query: 181 LIHADSHGAIVIPYEVAAKLPEAAELCGRRETPILDIARSKDFSLEKLKDALKRSAEIH 239 LIHAD HGAIVIP+++AA LP+AAELC RRETPIL+IARS DFSL+KLK+ALKRSAEIH Sbjct: 181 LIHADRHGAIVIPHDIAASLPDAAELCARRETPILEIARSADFSLDKLKEALKRSAEIH 239 >ref|YP_001206637.1| hypothetical protein BRADO4690 [Bradyrhizobium sp. ORS 278] emb|CAL78420.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 239 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 211/239 (88%), Positives = 226/239 (94%) Query: 1 VTTSASAPLPASVLEALARYDTPTICNAMEIVAPERRLIGYTVKQLVCPFPTLPPMVGYA 60 +TTSA+APL ++LEALARYDTPTICNAME+VAPERRLIGYT K LVCPFP LPPMVGYA Sbjct: 1 MTTSAAAPLAPAILEALARYDTPTICNAMELVAPERRLIGYTTKPLVCPFPDLPPMVGYA 60 Query: 61 RTTTIRSVLKSGLSAEEQSKRRIDYYEYVGTGFGPRISVIQDIDGPDVGYGAFWGEVQSN 120 RT TIRSV+KSGL AEEQ++RR DYYEYVGTG GPRI VIQDIDGPD+GYGAFWGEVQSN Sbjct: 61 RTATIRSVVKSGLPAEEQARRRTDYYEYVGTGHGPRIVVIQDIDGPDIGYGAFWGEVQSN 120 Query: 121 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTVRSDD 180 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTVRSDD Sbjct: 121 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTVRSDD 180 Query: 181 LIHADSHGAIVIPYEVAAKLPEAAELCGRRETPILDIARSKDFSLEKLKDALKRSAEIH 239 LIH+D HGAIVIP+++AA+LPEAAELCGRRETPIL+IARS DFSLEKLK ALKRSAEIH Sbjct: 181 LIHSDRHGAIVIPHDIAARLPEAAELCGRRETPILEIARSADFSLEKLKAALKRSAEIH 239 >ref|YP_569213.1| hypothetical protein RPD_2077 [Rhodopseudomonas palustris BisB5] gb|ABE39312.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 239 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 174/231 (75%), Positives = 197/231 (85%) Query: 9 LPASVLEALARYDTPTICNAMEIVAPERRLIGYTVKQLVCPFPTLPPMVGYARTTTIRSV 68 LPA+VLEALARYDTPTICNAMEIVAPERR IG+T + L+CPFP LPP+VGYART TIR+ Sbjct: 9 LPAAVLEALARYDTPTICNAMEIVAPERRAIGFTTRPLICPFPQLPPIVGYARTATIRAT 68 Query: 69 LKSGLSAEEQSKRRIDYYEYVGTGFGPRISVIQDIDGPDVGYGAFWGEVQSNVHKALGCL 128 + S L A EQ RR+ YYEYVG+G GPRISVIQDIDGPD G+GAFWGEV S VHKALGCL Sbjct: 69 VASDLPAAEQQARRMAYYEYVGSGHGPRISVIQDIDGPDAGFGAFWGEVNSAVHKALGCL 128 Query: 129 GVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTVRSDDLIHADSHG 188 GV+TDGSIRD+PQWAPGFQALAGS+GPSHA VH F E+RVAGMTVR DLIHADSHG Sbjct: 129 GVVTDGSIRDVPQWAPGFQALAGSLGPSHAHVHVTGFAAEIRVAGMTVRDGDLIHADSHG 188 Query: 189 AIVIPYEVAAKLPEAAELCGRRETPILDIARSKDFSLEKLKDALKRSAEIH 239 AIVIP+ +A +LP AAELCGRRE PIL+IAR FSL++L++A+ RS EIH Sbjct: 189 AIVIPHHLAEELPAAAELCGRREVPILEIARDPSFSLQRLREAMIRSGEIH 239 >ref|YP_486972.1| hypothetical protein RPB_3365 [Rhodopseudomonas palustris HaA2] gb|ABD08061.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 239 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/239 (74%), Positives = 199/239 (83%) Query: 1 VTTSASAPLPASVLEALARYDTPTICNAMEIVAPERRLIGYTVKQLVCPFPTLPPMVGYA 60 ++ S + LPA+VLEALARYDTPTICNAMEIVAPERR IG+T + L+CPFP LPP+VGYA Sbjct: 1 MSQSETGLLPAAVLEALARYDTPTICNAMEIVAPERRAIGFTTRPLICPFPQLPPIVGYA 60 Query: 61 RTTTIRSVLKSGLSAEEQSKRRIDYYEYVGTGFGPRISVIQDIDGPDVGYGAFWGEVQSN 120 RT TIR+ + SGL A EQ RR+ YYEYVG+G GPRISVIQDIDGPD G+GAFWGEV S Sbjct: 61 RTATIRATVASGLPATEQQARRMAYYEYVGSGQGPRISVIQDIDGPDAGFGAFWGEVNSA 120 Query: 121 VHKALGCLGVITDGSIRDIPQWAPGFQALAGSIGPSHAWVHAESFGGEVRVAGMTVRSDD 180 VH+ALGCLGVITDGSIRDIPQWAPGFQALAGSI PSH VH F E+RVAGMTVR D Sbjct: 121 VHQALGCLGVITDGSIRDIPQWAPGFQALAGSIAPSHGHVHVTGFAAEIRVAGMTVRDGD 180 Query: 181 LIHADSHGAIVIPYEVAAKLPEAAELCGRRETPILDIARSKDFSLEKLKDALKRSAEIH 239 LIHADSHGAIVIP+ +A KLP AA+LCGRRE PIL IAR FSL++L++AL RS EIH Sbjct: 181 LIHADSHGAIVIPHHLADKLPAAADLCGRREVPILAIARDPSFSLQRLREALIRSGEIH 239