BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0176.0003.p (345 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239495.1| hypothetical protein BBta_3496 [Bradyrhizobi... 455 e-126 ref|NP_770428.1| hypothetical protein bll3788 [Bradyrhizobium ja... 439 e-121 ref|YP_486983.1| hypothetical protein RPB_3376 [Rhodopseudomonas... 427 e-118 ref|NP_947340.1| hypothetical protein RPA1995 [Rhodopseudomonas ... 418 e-115 ref|YP_001991202.1| hypothetical protein Rpal_2206 [Rhodopseudom... 417 e-114 >ref|YP_001239495.1| hypothetical protein BBta_3496 [Bradyrhizobium sp. BTAi1] gb|ABQ35589.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 392 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/381 (63%), Positives = 273/381 (71%), Gaps = 40/381 (10%) Query: 2 LAGIALPATHALAQVPPGPPGPAPQGAPQPTPQANPMCGRLEGQLAAIDRGGGSGDPAKD 61 L G+ L +HALAQ P G P P NP+C RLE QLA+IDRGGG GDPA++ Sbjct: 15 LLGLILTGSHALAQSSSDSYAQMPPGPPTPQAGVNPICPRLEAQLASIDRGGG-GDPARE 73 Query: 62 EQIRRYQDAATRQQGELDRVTAQARRMGCDSSGFFSLFNNNSAQCGPVNTQIQQMRANLD 121 +QIRRYQDAA +QQ ELDRV+ QA+RMGCDSSGFFSLFN SA+C PVN QIQQMRANLD Sbjct: 74 DQIRRYQDAAAKQQSELDRVSMQAKRMGCDSSGFFSLFNGRSAECAPVNNQIQQMRANLD 133 Query: 122 QITANLERLRSGGLGGADRENQRRSVLTALAQNNCGPQYAAAARG----------PGNFL 171 QIT +LERLR GG GG +R+NQRRSVL AL QNNCGPQY A GNFL Sbjct: 134 QITGSLERLRGGGFGG-ERDNQRRSVLAALGQNNCGPQYQQYANANRGGGGGGGGGGNFL 192 Query: 172 ENLFGGGGGGNPNNPLPPPDAQYGAQSGTFRTVCVRTCDGAYFPISFATVQARFAADEQI 231 +LFGGG NP LPPP A A GT+RTVCVR+CDGAYFPISFATV RFA DE+ Sbjct: 193 TSLFGGGPDTNPAASLPPPSADLAAPQGTYRTVCVRSCDGAYFPISFATVPGRFADDERA 252 Query: 232 CKAQCPAADASLFTYRNPGEDINQAVSISGVSYSSLPNAFKYRTEFNPSCSCKPAGQSWA 291 CKAQCPAADA+LFTYRNPGED+NQAVS++G YS+LPNAFKYRTEFNPSCSCK GQ+WA Sbjct: 253 CKAQCPAADATLFTYRNPGEDMNQAVSVNGQPYSALPNAFKYRTEFNPSCSCKAPGQTWA 312 Query: 292 EALKAVDDKASAEQQGDIIVTEESARKMQQRAQTKXPASDG------------------- 332 +ALK++DD+ASA +QGDIIVTEESA++MQQR QT P + Sbjct: 313 DALKSIDDRASAAEQGDIIVTEESAKRMQQR-QTGKPPATAAKKGAAPADAAPPAATADT 371 Query: 333 --------QIRTVGPTFIPKR 345 QIRTVGPTFIP R Sbjct: 372 TTGAGGDKQIRTVGPTFIPAR 392 >ref|NP_770428.1| hypothetical protein bll3788 [Bradyrhizobium japonicum USDA 110] dbj|BAC49053.1| bll3788 [Bradyrhizobium japonicum USDA 110] Length = 399 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 229/348 (65%), Positives = 264/348 (75%), Gaps = 41/348 (11%) Query: 36 NPMCGRLEGQLAAIDRGGGSGDPAKDEQIRRYQDAATRQQGELDRVTAQARRMGCDSSGF 95 NPMC RLEGQLAA+DRGGG GDPA+++QIRRYQD+ +QQ ELDRVT QA+RMGCDSSGF Sbjct: 53 NPMCARLEGQLAALDRGGG-GDPAREDQIRRYQDSQAKQQAELDRVTMQAKRMGCDSSGF 111 Query: 96 FSLFNNNSAQCGPVNTQIQQMRANLDQITANLERLRSGGLGGA--DRENQRRSVLTALAQ 153 FSLFN SAQCGPVNTQIQQMRANLDQIT NLERLR GG GG +R++QRRSVL ALAQ Sbjct: 112 FSLFNGQSAQCGPVNTQIQQMRANLDQITGNLERLRGGGPGGFSPERDSQRRSVLVALAQ 171 Query: 154 NNCGPQYA--AAARGPGNFLENLFGGGGGGNPNNPLPPPDAQYGAQSGTFRTVCVRTCDG 211 NNCGPQYA A A+G GNFL NLFGG N NNP P + G QSGT+RTVCVRTCDG Sbjct: 172 NNCGPQYANAAQAQGGGNFLSNLFGGNN--NSNNPQSVPPSDLGPQSGTYRTVCVRTCDG 229 Query: 212 AYFPISFATVQARFAADEQICKAQCPAADASLFTYRNPGEDINQAVSISGVSYSSLPNAF 271 AYFP+SFATV ARF DE+ CKA CPAA+A L+T+RNPGED+N AVSISG Y++LP AF Sbjct: 230 AYFPVSFATVPARFPDDEKTCKALCPAAEAVLYTHRNPGEDMNSAVSISGQPYTALPTAF 289 Query: 272 KYRTEFNPSCSCKPAGQSWAEALKAVDDKASAEQQGDIIVTEESARKMQQRAQTK-XPAS 330 K+R+EFNPSCSCK AGQ+WA+ALK+ DDKA+AEQQGDIIVTEESA+KMQQ+ K PA+ Sbjct: 290 KFRSEFNPSCSCKAAGQTWADALKSADDKAAAEQQGDIIVTEESAKKMQQQRLNKGAPAT 349 Query: 331 DGQ---------------------------------IRTVGPTFIPKR 345 + IR+VGPTF+P++ Sbjct: 350 TAKKGTAAPAPTTATAPAATPPADTGTAPANSENKPIRSVGPTFLPQQ 397 >ref|YP_486983.1| hypothetical protein RPB_3376 [Rhodopseudomonas palustris HaA2] gb|ABD08072.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 383 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 231/353 (65%), Positives = 259/353 (73%), Gaps = 40/353 (11%) Query: 20 PPGPAPQGAPQPTPQANPMCGRLEGQLAAIDRGGGSGDPAKDEQIRRYQDAATRQQGELD 79 PPG APQGA NP+C RLE QLA+IDRGGG DPA+ EQIRRY+DA RQQGELD Sbjct: 44 PPGGAPQGA------VNPVCPRLEAQLASIDRGGG--DPARAEQIRRYEDAVNRQQGELD 95 Query: 80 RVTAQARRMGCDSSGFFSLFNNNSAQCGPVNTQIQQMRANLDQITANLERLRSGGLGGAD 139 RVT QA+RMGCDSSGFFSLFN SAQCGPVN QIQQMR NLDQ+T+ LERLRSGG GG D Sbjct: 96 RVTMQAKRMGCDSSGFFSLFNGQSAQCGPVNNQIQQMRGNLDQMTSGLERLRSGGPGGGD 155 Query: 140 RENQRRSVLTALAQNNCGPQYAAAA-RGPGNFLENLFGGGGGGNPNNPLPPPDAQYGAQS 198 R+NQRRSVL ALAQNNCGPQYAAAA +G GNFL+NLF G P PLP + S Sbjct: 156 RDNQRRSVLIALAQNNCGPQYAAAAQQGSGNFLDNLFRGNSPNAPGAPLP----DFNTDS 211 Query: 199 GTFRTVCVRTCDGAYFPISFATVQARFAADEQICKAQCPAADASLFTYRNPGEDINQAVS 258 GTFRTVCVRTCDG YFPISFATV RFA DE+ CK+ CPA+DA+L+ YRNPG+D+N AVS Sbjct: 212 GTFRTVCVRTCDGYYFPISFATVPGRFADDEKTCKSLCPASDAALYAYRNPGQDMNSAVS 271 Query: 259 ISGVSYSSLPNAFKYRTEFNPSCSCKPAGQSWAEALKAVDDKASAEQQGDIIVTEESARK 318 I+G Y+SLP AF+YR EFNP+C+CK A QSWA+ALK VDDKAS E GDIIVTEESA++ Sbjct: 272 INGQPYTSLPAAFRYRQEFNPACACKAANQSWADALKGVDDKASLE-HGDIIVTEESAKR 330 Query: 319 M----QQRAQTK---------------------XPASD-GQIRTVGPTFIPKR 345 M QRA + ASD IR+VGPTFIP R Sbjct: 331 MALPPAQRAAARKGNTTAPAAAAANGAAKPPATTGASDPNTIRSVGPTFIPTR 383 >ref|NP_947340.1| hypothetical protein RPA1995 [Rhodopseudomonas palustris CGA009] emb|CAE27436.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 389 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 219/350 (62%), Positives = 262/350 (74%), Gaps = 30/350 (8%) Query: 20 PPG--PAPQGAPQPTPQANPMCGRLEGQLAAIDRGGGSGDPAKDEQIRRYQDAATRQQGE 77 PPG AP P ANPMC RLE QLA+IDRG S DPA+ +QIRR++DAA RQQ E Sbjct: 43 PPGYQQAPSAGQPGAPAANPMCPRLEAQLASIDRG--SMDPARADQIRRFEDAAARQQAE 100 Query: 78 LDRVTAQARRMGCDSSGFFSLFNNNSAQCGPVNTQIQQMRANLDQITANLERLRSGGLGG 137 LDRV+ QA+RMGC+SSGFFSLF+ SAQCGPVN+QIQQMR NLDQ+ ++LERLRSGG GG Sbjct: 101 LDRVSMQAKRMGCESSGFFSLFSGQSAQCGPVNSQIQQMRGNLDQMNSSLERLRSGGPGG 160 Query: 138 ADRENQRRSVLTALAQNNCGPQYAAAARGPGNFLENLFGGGGGGNPNNPLPPPDAQYG-A 196 DRENQRRSV+ ALAQNNCGPQYAAAA+ G L NLF GG G P +P D YG Sbjct: 161 NDRENQRRSVILALAQNNCGPQYAAAAQQSGGLLNNLFNGGNAGAPGVGMPGTD--YGNT 218 Query: 197 QSGTFRTVCVRTCDGAYFPISFATVQARFAADEQICKAQCPAADASLFTYRNPGEDINQA 256 + GT+RTVCVRTCDG YFPISFATV +RF DE+ CK+ CPA++ASL+ YRNPG+D+NQA Sbjct: 219 EGGTYRTVCVRTCDGYYFPISFATVPSRFGDDERTCKSLCPASEASLYAYRNPGQDMNQA 278 Query: 257 VSISGVSYSSLPNAFKYRTEFNPSCSCKPAGQSWAEALKAVDDKASAEQQGDIIVTEESA 316 VSI+G SY++LPNAF+YR EFNPSC+CKPA Q+WA+A+K VDD+++AE GDIIVTEESA Sbjct: 279 VSINGQSYTALPNAFRYRQEFNPSCTCKPANQTWADAMKGVDDRSAAE-HGDIIVTEESA 337 Query: 317 RKM--------------QQRAQTKXPAS--------DGQIRTVGPTFIPK 344 ++M + T PAS G+IR+VGPTF+PK Sbjct: 338 KRMAQPPAQRAAAKNGAKAAPATNTPASPPAAASNDPGKIRSVGPTFLPK 387 >ref|YP_001991202.1| hypothetical protein Rpal_2206 [Rhodopseudomonas palustris TIE-1] gb|ACF00727.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 389 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 219/351 (62%), Positives = 263/351 (74%), Gaps = 29/351 (8%) Query: 17 PPGPPGPAPQGAPQPTPQANPMCGRLEGQLAAIDRGGGSGDPAKDEQIRRYQDAATRQQG 76 PPG P G P P ANPMC RLE QLA+IDRG S DPA+ +QIRR++DAA RQQ Sbjct: 43 PPGYQQAPPAGQPG-APAANPMCPRLEAQLASIDRG--SMDPARADQIRRFEDAAARQQA 99 Query: 77 ELDRVTAQARRMGCDSSGFFSLFNNNSAQCGPVNTQIQQMRANLDQITANLERLRSGGLG 136 ELDRV+ QA+RMGC+SSGFFSLF+ SAQCGPVN+QIQQMR NLDQ+ ++LERLRSGG G Sbjct: 100 ELDRVSMQAKRMGCESSGFFSLFSGQSAQCGPVNSQIQQMRGNLDQMNSSLERLRSGGPG 159 Query: 137 GADRENQRRSVLTALAQNNCGPQYAAAARGPGNFLENLFGGGGGGNPNNPLPPPDAQYG- 195 G DRE+QRRSV+ ALAQNNCGPQYAAAA+ G L NLF GG G P +P D YG Sbjct: 160 GNDRESQRRSVILALAQNNCGPQYAAAAQQSGGLLNNLFNGGNAGAPGVGMPGTD--YGN 217 Query: 196 AQSGTFRTVCVRTCDGAYFPISFATVQARFAADEQICKAQCPAADASLFTYRNPGEDINQ 255 + GT+RTVCVRTCDG YFPISFATV +RF DE+ CK+ CPA++ASL+ YRNPG+D+NQ Sbjct: 218 TEGGTYRTVCVRTCDGYYFPISFATVPSRFGDDERTCKSLCPASEASLYAYRNPGQDMNQ 277 Query: 256 AVSISGVSYSSLPNAFKYRTEFNPSCSCKPAGQSWAEALKAVDDKASAEQQGDIIVTEES 315 AVSI+G SY++LPNAF+YR EFNPSC+CKPA Q+WA+A+K VDD+++AE GDIIVTEES Sbjct: 278 AVSINGQSYTALPNAFRYRQEFNPSCTCKPANQTWADAMKGVDDRSAAE-HGDIIVTEES 336 Query: 316 ARKM--------------QQRAQTKXPAS--------DGQIRTVGPTFIPK 344 A++M + T PAS G+IR+VGPTF+PK Sbjct: 337 AKRMAQPPAQRAAAKNGAKAAPATNTPASPPAAASNDPGKIRSVGPTFLPK 387