BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0175.0011.p         (111 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001638232.1| hypothetical protein Mext_0749 [Methylobacte...   132   2e-29
ref|YP_001237842.1| hypothetical protein BBta_1727 [Bradyrhizobi...   130   7e-29
ref|YP_567864.1| hypothetical protein RPD_0725 [Rhodopseudomonas...   128   3e-28
ref|YP_001207924.1| hypothetical protein BRADO6056 [Bradyrhizobi...   124   5e-27
ref|YP_001411315.1| hypothetical protein Plav_0035 [Parvibaculum...   116   1e-24

>ref|YP_001638232.1| hypothetical protein Mext_0749 [Methylobacterium extorquens PA1]
 gb|ABY29161.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
          Length = 111

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/108 (54%), Positives = 80/108 (74%)

Query: 1   MKTEDRKQAIADYKKRASVAGVFAIRCRATGEVWVGQALDLDKIENRIWFTLRMGSHRNA 60
           M+TEDRK A+  YKKR    G++A+RC A+GEVWVG A DL KI+NR+WFTLR G++ + 
Sbjct: 1   MRTEDRKVAVNAYKKREVEGGIYAVRCVASGEVWVGGAPDLSKIQNRLWFTLRQGTNTHR 60

Query: 61  QLQRAWTAHGADHLSLETLERIEDEELGYVRDTLLKERVQHWRAELNA 108
            LQ  W AHGA+  S E +ER++ EE+GYVRD +++ER+ HW  +L A
Sbjct: 61  SLQSTWNAHGAEAFSFEIIERLDAEEIGYVRDRVMRERLVHWAEQLQA 108


>ref|YP_001237842.1| hypothetical protein BBta_1727 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33936.1| hypothetical protein BBta_1727 [Bradyrhizobium sp. BTAi1]
          Length = 111

 Score =  130 bits (327), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 77/111 (69%)

Query: 1   MKTEDRKQAIADYKKRASVAGVFAIRCRATGEVWVGQALDLDKIENRIWFTLRMGSHRNA 60
           M  + RK A+A YK+R S AG+FA+ C ATGE W+G A DLDKI+NR+WFTLR G HR  
Sbjct: 1   MTPDLRKAAVAAYKERKSPAGIFAVTCAATGERWIGCAPDLDKIQNRLWFTLRQGGHRRG 60

Query: 61  QLQRAWTAHGADHLSLETLERIEDEELGYVRDTLLKERVQHWRAELNASVV 111
            LQ AWTAHGA+  SL+ +E +++E LGYVRD +  ER  HW A   A  +
Sbjct: 61  GLQAAWTAHGAEAFSLDIIEALDEETLGYVRDRVFAERQAHWCAVHGAEAI 111


>ref|YP_567864.1| hypothetical protein RPD_0725 [Rhodopseudomonas palustris BisB5]
 gb|ABE37963.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 111

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 76/111 (68%)

Query: 1   MKTEDRKQAIADYKKRASVAGVFAIRCRATGEVWVGQALDLDKIENRIWFTLRMGSHRNA 60
           M  +DRK AI  YK+R   A ++AIRC A   +WVG  L+ D ++NRIWFTLR G+H N 
Sbjct: 1   MNKDDRKAAITAYKERKPKAAIYAIRCTAADALWVGPTLNPDSVQNRIWFTLRFGNHPNR 60

Query: 61  QLQRAWTAHGADHLSLETLERIEDEELGYVRDTLLKERVQHWRAELNASVV 111
            LQ+AWTAHGAD  ++ETLE  E +   Y+RD  LK+R  HWR++L+A  V
Sbjct: 61  DLQQAWTAHGADAFAIETLELFEPDADRYLRDNQLKDRAAHWRSKLDARPV 111


>ref|YP_001207924.1| hypothetical protein BRADO6056 [Bradyrhizobium sp. ORS 278]
 emb|CAL79709.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 111

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 71/111 (63%)

Query: 1   MKTEDRKQAIADYKKRASVAGVFAIRCRATGEVWVGQALDLDKIENRIWFTLRMGSHRNA 60
           M  + RK A+A YK+R + AG++A+ C ATGE W+G A DLDKI+NR+WFTLR G HR  
Sbjct: 1   MTPDQRKAAVAAYKERKTPAGIYAVICAATGERWIGCAPDLDKIQNRLWFTLRQGGHRRG 60

Query: 61  QLQRAWTAHGADHLSLETLERIEDEELGYVRDTLLKERVQHWRAELNASVV 111
            LQ AW AHG    SLE LE  +DE L YVRD    ER  HW A   A  +
Sbjct: 61  GLQAAWAAHGEGAFSLEVLEAFDDEALAYVRDRAFAERQAHWCAVHQAEAI 111


>ref|YP_001411315.1| hypothetical protein Plav_0035 [Parvibaculum lavamentivorans DS-1]
 gb|ABS61658.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
          Length = 116

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MKTEDRKQAIADYKKRASVAGVFAIRCRATGEVWVGQALDLDKIENRIWFTLRMGSHRNA 60
           M+   RK+ + D+KKR ++ G+FA+RC ATGEVW+G + +L+  +N IWF LR+G+HR  
Sbjct: 3   MEKSRRKELVRDFKKREALPGIFAVRCLATGEVWIGPSRNLEAQQNSIWFQLRLGNHRVT 62

Query: 61  QLQRAWTAHGADHLSLETLERIEDEEL-GYVRDTLLKERVQHWRAELNASV 110
            +Q AW AHG ++L  E +ER+ED ++  Y+  +LLKER+  WR EL+A +
Sbjct: 63  AMQAAWNAHGEENLVYEIVERMEDADMTPYLLQSLLKERLAFWRKELSAGL 113