BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0174.0018.p         (179 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08209576.1| hypothetical protein Y88_0428 [Novosphingobiu...   148   3e-34
gb|ADP99923.1| conserved hypothetical protein [Marinobacter adha...   119   2e-25
ref|YP_001833416.1| hypothetical protein Bind_2314 [Beijerinckia...   111   6e-23
ref|ZP_07264763.1| hypothetical protein Psyrps6_17173 [Pseudomon...   102   2e-20
ref|ZP_04402039.1| hypothetical protein VCB_000210 [Vibrio chole...    59   2e-07

>ref|ZP_08209576.1| hypothetical protein Y88_0428 [Novosphingobium nitrogenifigens DSM
           19370]
 gb|EGD58374.1| hypothetical protein Y88_0428 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 902

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/159 (45%), Positives = 98/159 (61%)

Query: 1   MNETLRNLFVKRLIENIEVIAPGPRFERFGNAYVDFYLGVPLGHRGLNALGNPVGHTVDT 60
           M E+LR  +  RL++ I  I PGP FERFG  ++D +L V L HRGLNA  +PVGHT+D+
Sbjct: 1   MRESLRADYTARLMDGIGRIGPGPMFERFGAKFLDHHLDVVLVHRGLNAQLSPVGHTIDS 60

Query: 61  VSDQGHVAAEYTIDKKYFDGDMDKARNDFEHARKKHPNAKDVFLLCTETAGPKRYSEMVE 120
             D G V AEY+ID+ YF G M KAR+D  H  +KHP   D++LL +  AG        +
Sbjct: 61  YDDAGGVGAEYSIDQDYFSGSMPKARDDLLHVLRKHPTVADIYLLSSRKAGEGIIPAFTQ 120

Query: 121 EAAKYRAKHGVSIHLHDGRRIAETIVDRLLGNDAVVERL 159
               +      ++H++D RRIAE IVD LL +DA ++ L
Sbjct: 121 RTQHWPGMLARALHVYDARRIAEVIVDELLPSDAAIDDL 159


>gb|ADP99923.1| conserved hypothetical protein [Marinobacter adhaerens HP15]
          Length = 900

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 91/159 (57%)

Query: 1   MNETLRNLFVKRLIENIEVIAPGPRFERFGNAYVDFYLGVPLGHRGLNALGNPVGHTVDT 60
           MN   RNL ++R+I+++ ++APG  FERFG  ++++   V L HRG +  G+PVG  +D 
Sbjct: 1   MNPQTRNLLIQRVIDSLGILAPGSIFERFGVVFIEYLRDVKLVHRGSSVGGSPVGGALDA 60

Query: 61  VSDQGHVAAEYTIDKKYFDGDMDKARNDFEHARKKHPNAKDVFLLCTETAGPKRYSEMVE 120
           VS+ G +  E +I + YF G M K   D +H     P A+D++LL ++ A       MV 
Sbjct: 61  VSEDGSLVVEASIVQGYFSGAMTKPWGDLDHTLSLAPRAEDIYLLSSQRAQTGVIEAMVN 120

Query: 121 EAAKYRAKHGVSIHLHDGRRIAETIVDRLLGNDAVVERL 159
            A +    +G  +HL D R IAE I+D L+  D  ++ L
Sbjct: 121 TALQQTRMNGRHLHLMDSRSIAEAIIDTLMLRDDAIDDL 159


>ref|YP_001833416.1| hypothetical protein Bind_2314 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gb|ACB95927.1| hypothetical protein Bind_2314 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 904

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 2/159 (1%)

Query: 1   MNETLRNLFVKRLIENIEVIAPGPRFERFGNAYVDFYLGVPLGHRGLNALGNPVGHTVDT 60
           MN   R L ++RLIE I +I  GP FERFG  ++D  L  PL H GLN LG PV   +D+
Sbjct: 1   MNPQTRKLLIQRLIEPIGMI--GPEFERFGELFLDHLLSTPLEHSGLNVLGFPVSRVLDS 58

Query: 61  VSDQGHVAAEYTIDKKYFDGDMDKARNDFEHARKKHPNAKDVFLLCTETAGPKRYSEMVE 120
            +  G + AEY+ +  YF   M KA+ D  HA    PN + V L+  + + P+   + ++
Sbjct: 59  SAADGAIVAEYSAENDYFTKGMPKAQKDIAHALSHRPNVRLVLLIAAQPSHPQIVEKFLQ 118

Query: 121 EAAKYRAKHGVSIHLHDGRRIAETIVDRLLGNDAVVERL 159
            A         S+ +    RIAE +VD++  ND+ VE L
Sbjct: 119 VAMAGPGMKERSLRIWGAERIAEQLVDKITFNDSAVEAL 157


>ref|ZP_07264763.1| hypothetical protein Psyrps6_17173 [Pseudomonas syringae pv.
           syringae 642]
          Length = 912

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 2/159 (1%)

Query: 1   MNETLRNLFVKRLIENIEVIAPGPRFERFGNAYVDFYLGVPLGHRGLNALGNPVGHTVDT 60
           M    R L++ +L + I +I  G  FE FG  ++   L VP+G +G+NA G PV   VD 
Sbjct: 3   MEAQKRTLYIDQLAKEISLI--GQPFEIFGGLFLRLVLNVPVGSQGVNAGGFPVAGVVDG 60

Query: 61  VSDQGHVAAEYTIDKKYFDGDMDKARNDFEHARKKHPNAKDVFLLCTETAGPKRYSEMVE 120
           VS  G +AAEY+ +K YF   M KAR D EH  +K P+A++++L+      P+   + V+
Sbjct: 61  VSADGLIAAEYSAEKGYFTSSMAKARKDLEHVLRKAPSAREIYLVAGSKKRPQIAQKFVD 120

Query: 121 EAAKYRAKHGVSIHLHDGRRIAETIVDRLLGNDAVVERL 159
                    G  +HL     IA +IVD+ L +D +V ++
Sbjct: 121 AVMNSPPLQGRVLHLLGAEEIATSIVDQGLFSDDIVLKM 159


>ref|ZP_04402039.1| hypothetical protein VCB_000210 [Vibrio cholerae TMA 21]
 gb|EEO15410.1| hypothetical protein VCB_000210 [Vibrio cholerae TMA 21]
          Length = 929

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 12/159 (7%)

Query: 3   ETLRNLFVKRLIENIEVIAPGPRFERFGNAYVDFYLGVPLGHRGLNALGNPVGHTVDTVS 62
           E ++   VK LI+ ++ ++     E  G+  V       + H GLN    P G+TVD+ +
Sbjct: 4   EIIKQRVVKELIQEVKSLS-ATDIELVGHNLVSLLNNQRMVHHGLNKDYRPAGYTVDSFA 62

Query: 63  DQGHVAAEYTIDKKYFDGD-------MDKARNDFEHA--RKKHPNAKDVFLLCTETAGPK 113
               V  EY+++K YFD +         K   D  HA    + P    ++L+ ++   P 
Sbjct: 63  QNSSVITEYSVEKGYFDNNGTSEVPRYSKIEKDLAHALSHNQTPTLSKIYLISSQEEIPS 122

Query: 114 RYSEMVEEAAKYRAKHGVSIHLHDGRRIAETIVDRLLGN 152
             S        + + HG  I + D R +A+ I ++ + N
Sbjct: 123 FRSNF--NKTSWFSSHGSVIEIFDARELAKVIYEQSVAN 159