BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0174.0016.p (374 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768755.1| hypothetical protein blr2115 [Bradyrhizobium ja... 541 e-152 ref|YP_003944219.1| hypothetical protein EIO_3122 [Ketogulonicig... 491 e-137 gb|AAC24513.1| unknown [Mesorhizobium loti] >gi|20804243|emb|CAD... 320 2e-85 ref|ZP_01750064.1| hypothetical protein RCCS2_09159 [Roseobacter... 277 2e-72 ref|YP_003145247.1| hypothetical protein Kkor_0057 [Kangiella ko... 251 1e-64 >ref|NP_768755.1| hypothetical protein blr2115 [Bradyrhizobium japonicum USDA 110] dbj|BAC47380.1| blr2115 [Bradyrhizobium japonicum USDA 110] Length = 374 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 261/374 (69%), Positives = 314/374 (83%) Query: 1 VDIDEFRNSQMRLYGLTKADESYTFYHDETNNIIKLHVGVQGLNVAELKVFVLGGVVHEG 60 +DIDE R+++++L+GLTKAD YTFYHDETNNI KL++ LNVAELKVFVLGG+VHEG Sbjct: 1 MDIDELRDAEIQLHGLTKADGVYTFYHDETNNIRKLYIDDGRLNVAELKVFVLGGIVHEG 60 Query: 61 APRAIDIEPLRAAMRVQKSAPEIKLKHVAKGDFLAVLRSAKLTTVLRWIADNGLMIHYHD 120 APR I+I+ LR AMR+QK+APEIKL+HVAKG+FL VLRS KLTT LRW+ DNGLMIHYH+ Sbjct: 61 APRPIEIQSLREAMRIQKTAPEIKLEHVAKGNFLDVLRSRKLTTFLRWLIDNGLMIHYHE 120 Query: 121 LDPLYWSIVDIIDSILSELRDPVLIQYHALLKSDLAAVLRSYLAATINLFYRYNYPDLVP 180 LDP YWS+ DIIDSI+ EL +P+L+QYH LLKSDL AVLR LAATI LF+ + YP L P Sbjct: 121 LDPFYWSVADIIDSIVPELGNPMLLQYHVLLKSDLVAVLRCELAATIQLFHDFGYPGLSP 180 Query: 181 EHRKPFLNELVDLLNHSVDVLSPVNARMLKNVLKAGRSLESLDFIEGYPPHLLIDDFSTF 240 E R+PFL+ L+++L + DVL NA MLK VL+AGR+LESL+FIEGY P+LLID+FSTF Sbjct: 181 EGRRPFLDRLIEILERNSDVLRHFNAMMLKGVLQAGRALESLEFIEGYYPNLLIDEFSTF 240 Query: 241 YMGRIAIFKNSAHVLDMEESIRDRFERTPLTSGGKPVTHYRFADSKAEPGIQLSDIVVGV 300 Y GRIAIFKNS H+ DME+ I DR TPLTS GKPV ++RFADSKAE G+Q+SD++VGV Sbjct: 241 YQGRIAIFKNSTHIFDMEKVIHDRLLETPLTSQGKPVANFRFADSKAELGLQISDVIVGV 300 Query: 301 LGKMHTYFTETAAEEIAADRAGLAGTSLQNAELLRDLISASHVANIAFLNHVSSLHDLDK 360 LGKMHTYFT T E++AADR LAGTSL+NA+LL DLISASH AN+ FL+HV+S+HD+DK Sbjct: 301 LGKMHTYFTNTGHEDVAADREALAGTSLENAKLLSDLISASHAANVTFLHHVASVHDIDK 360 Query: 361 LDLFLRFYDGAHAA 374 LDLFLRF DGAH A Sbjct: 361 LDLFLRFPDGAHVA 374 >ref|YP_003944219.1| hypothetical protein EIO_3122 [Ketogulonicigenium vulgare Y25] gb|ADO44180.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25] gb|AEM42459.1| hypothetical protein KVU_PA0039 [Ketogulonigenium vulgarum WSH-001] Length = 375 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 235/374 (62%), Positives = 296/374 (79%), Gaps = 1/374 (0%) Query: 1 VDIDEFRNSQMRLYGLTKADESYTFYHDETNNIIKLHVGVQGLNVAELKVFVLGGVVHEG 60 +D+DE RN Q++++GLT AD YTFYHDETNNI KLHVG QGLNV ELK FVLGGVVHEG Sbjct: 2 IDVDEIRNPQIQMFGLTGADTVYTFYHDETNNIRKLHVGEQGLNVPELKTFVLGGVVHEG 61 Query: 61 APRAIDIEPLRAAMRVQKSAPEIKLKHVAKGDFLAVLRSAKLTTVLRWIADNGLMIHYHD 120 R +D+ LR MR+Q SA EIKLKHVAKG+FL +L+S+KLT L+WIADN LM+HYH+ Sbjct: 62 PQRPLDLSSLRQVMRIQPSAHEIKLKHVAKGEFLDILKSSKLTAFLQWIADNDLMLHYHE 121 Query: 121 LDPLYWSIVDIIDSILSELRDPVLIQYHALLKSDLAAVLRSYLAATINLFYRYNYPDLVP 180 LDPLYWS+VD+IDSIL EL + +LI+YHALLKSD A ++R L ++LF RY+YPD+VP Sbjct: 122 LDPLYWSVVDVIDSILPELGNSMLIEYHALLKSDFAEIVRHELPFVVDLFRRYDYPDIVP 181 Query: 181 EHRKPFLNELVDLLNHSVDVLSP-VNARMLKNVLKAGRSLESLDFIEGYPPHLLIDDFST 239 ++R+PFLNEL+DL+ + +L +NA MLK VL+AGRSL+ L FIEG+ LI+DFS Sbjct: 182 QNREPFLNELIDLVERNAGLLDEGMNAMMLKGVLQAGRSLDELAFIEGFSARKLIEDFSA 241 Query: 240 FYMGRIAIFKNSAHVLDMEESIRDRFERTPLTSGGKPVTHYRFADSKAEPGIQLSDIVVG 299 FY R+A+FKNS H++DME IRD FE L+ G+P T+Y F+DS +E GIQLSDI VG Sbjct: 242 FYRNRVAVFKNSKHIMDMETEIRDAFEDVQLSCNGEPFTNYLFSDSHSEAGIQLSDIAVG 301 Query: 300 VLGKMHTYFTETAAEEIAADRAGLAGTSLQNAELLRDLISASHVANIAFLNHVSSLHDLD 359 V+GKMHTY ++T+AEE+ +RA L G +L+NAELLRDLI S+ AN AFL+HV+SLHD+D Sbjct: 302 VIGKMHTYLSQTSAEEVDRERAALTGAALENAELLRDLIDNSNAANRAFLHHVASLHDID 361 Query: 360 KLDLFLRFYDGAHA 373 KLD FLRF DG +A Sbjct: 362 KLDRFLRFADGRYA 375 >gb|AAC24513.1| unknown [Mesorhizobium loti] emb|CAD31269.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A] Length = 366 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 165/360 (45%), Positives = 222/360 (61%) Query: 6 FRNSQMRLYGLTKADESYTFYHDETNNIIKLHVGVQGLNVAELKVFVLGGVVHEGAPRAI 65 R+ + L+GL KAD++Y Y+DETNNI +LHV GLN + K FV+ GV H G PR I Sbjct: 2 LRDPTIALHGLVKADDAYAVYYDETNNIRRLHVRADGLNERDPKCFVIAGVAHRGPPRPI 61 Query: 66 DIEPLRAAMRVQKSAPEIKLKHVAKGDFLAVLRSAKLTTVLRWIADNGLMIHYHDLDPLY 125 +E LR+ +R+Q SA EIKLKH+A G FL L S K+ L W++ L H+ LDPLY Sbjct: 62 SLEALRSELRIQASAKEIKLKHIATGSFLEALTSPKMEAFLAWLSAQDLYTHFTVLDPLY 121 Query: 126 WSIVDIIDSILSELRDPVLIQYHALLKSDLAAVLRSYLAATINLFYRYNYPDLVPEHRKP 185 WSIVDIIDSIL+E + L+ ++ LK+DL VLR T+++F RY YPD+ R+ Sbjct: 122 WSIVDIIDSILAEAGENALLPWNQALKNDLYTVLRHDYETTVDMFRRYTYPDVGRARRRE 181 Query: 186 FLNELVDLLNHSVDVLSPVNARMLKNVLKAGRSLESLDFIEGYPPHLLIDDFSTFYMGRI 245 F+NEL+DLL H ++L P+ MLK VL+ L++L F+E P++LI+ F FY+ RI Sbjct: 182 FVNELLDLLTHRANLLPPLRRNMLKGVLQIATRLDALPFLEDETPNVLIEGFGPFYLERI 241 Query: 246 AIFKNSAHVLDMEESIRDRFERTPLTSGGKPVTHYRFADSKAEPGIQLSDIVVGVLGKMH 305 A+ KNS H+LD E + LT+G KP+ +YRFA S EPGIQLSD+V G+LGK Sbjct: 242 AMLKNSTHILDDEYGVEPYLSGLGLTNGAKPLANYRFASSHDEPGIQLSDVVAGLLGKFF 301 Query: 306 TYFTETAAEEIAADRAGLAGTSLQNAELLRDLISASHVANIAFLNHVSSLHDLDKLDLFL 365 TY TA EE+ DR L+ + E L L+ S N F +++ S D FL Sbjct: 302 TYVCVTAGEELVQDRQNLSAQQTRTLERLAALMEQSVEENAVFAHYILSERDRHGAAFFL 361 >ref|ZP_01750064.1| hypothetical protein RCCS2_09159 [Roseobacter sp. CCS2] gb|EBA14047.1| hypothetical protein RCCS2_09159 [Roseobacter sp. CCS2] Length = 368 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 147/361 (40%), Positives = 221/361 (61%) Query: 1 VDIDEFRNSQMRLYGLTKADESYTFYHDETNNIIKLHVGVQGLNVAELKVFVLGGVVHEG 60 VD+++ RN + L GLT D +TF++DETNNI +LH+ GLNV + FVLGG+ H G Sbjct: 2 VDVNDIRNPAIALGGLTGLDRVFTFHYDETNNIRRLHLTPNGLNVRAPQCFVLGGIAHAG 61 Query: 61 APRAIDIEPLRAAMRVQKSAPEIKLKHVAKGDFLAVLRSAKLTTVLRWIADNGLMIHYHD 120 +D E LR A +Q+S+ E+KLKH+ KGDFLA+L + K+ T L W+ ++ IH+ Sbjct: 62 LAPVLDFEDLRTAFNLQRSSVELKLKHLGKGDFLALLDAPKVCTFLNWLKNSNAFIHFQV 121 Query: 121 LDPLYWSIVDIIDSILSELRDPVLIQYHALLKSDLAAVLRSYLAATINLFYRYNYPDLVP 180 LDP+YWS+VD+IDSI++E LI LLK+DL +LR+ T + RY YPD+ Sbjct: 122 LDPMYWSLVDVIDSIIAEHGSNELIAIAPLLKNDLYWLLRNDPDETPEILGRYTYPDVGR 181 Query: 181 EHRKPFLNELVDLLNHSVDVLSPVNARMLKNVLKAGRSLESLDFIEGYPPHLLIDDFSTF 240 R F+ EL +L D+ N +MLK +L+ G LE L ++E P++LID F +F Sbjct: 182 VRRATFIAELQVILKARQDLFPAFNFQMLKGLLQIGARLERLPYLEDERPNVLIDGFGSF 241 Query: 241 YMGRIAIFKNSAHVLDMEESIRDRFERTPLTSGGKPVTHYRFADSKAEPGIQLSDIVVGV 300 Y+ R+A+FK+S H+LD+E SI+D L G ++++ F DS++ P +Q+SD++ G+ Sbjct: 242 YLHRLALFKHSNHILDIEPSIQDFLAGLELKDGEVALSNFSFVDSRSAPWVQVSDVLAGL 301 Query: 301 LGKMHTYFTETAAEEIAADRAGLAGTSLQNAELLRDLISASHVANIAFLNHVSSLHDLDK 360 LGK+ + + EEI A +GL G + L L+ S AF+ +++SL D + Sbjct: 302 LGKLFIFASNNDLEEIFASLSGLNGHQRAALDTLIGLVDRSTDECPAFVQYINSLEDQRR 361 Query: 361 L 361 L Sbjct: 362 L 362 >ref|YP_003145247.1| hypothetical protein Kkor_0057 [Kangiella koreensis DSM 16069] gb|ACV25479.1| conserved hypothetical protein [Kangiella koreensis DSM 16069] Length = 375 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 137/378 (36%), Positives = 214/378 (56%), Gaps = 9/378 (2%) Query: 1 VDIDEFRNSQMRLYGLTKADESYTFYHDETNNIIKLHVGVQGLNVAELKVFVLGGVVHEG 60 +DI E R L D +YTFY+DETNNI K + G N A FVLGG+V EG Sbjct: 2 IDISEIRAQIKLLNPEINFDGAYTFYYDETNNIRKFRIKETGFNSAFTNNFVLGGLVFEG 61 Query: 61 APRAIDIEPLRAAMRVQKSAPEIKLKHVAKGDFLAVLRSAKLTTVLRWIADNGLMIHYHD 120 + D++PL+ ++R+Q +A E+K H+A+G F+ L+S L L+++ N L IHY Sbjct: 62 V--SPDVQPLKDSLRLQSTAKEVKFNHIARGSFIDCLKSQNLNLFLKYLVSNNLYIHYSS 119 Query: 121 LDPLYWSIVDIIDSIL--SELRDPVLIQYHALLKSDLAAVLRSYLAATINLFYRYNYPDL 178 ++ LYWS+VDI+DS + SE+ + Q+ +LK+DL + R + + ++LF +Y YP++ Sbjct: 120 INILYWSLVDIVDSAIVNSEISQKISAQFINVLKNDLYKLARLEINSMVSLFRKYEYPNI 179 Query: 179 VPEHRKPFLNELVDLLNHSVDVLSP---VNARMLKNVLKAGRSLESLDFIEGYPPHLLID 235 F+ E+ +L ++ P + L+ +L+ R SL F+ G +LI+ Sbjct: 180 KQNRVLSFIEEMSELFFPYIN--EPEFHIGLESLRQILQECRRKGSLPFVMGEEDFILIN 237 Query: 236 DFSTFYMGRIAIFKNSAHVLDMEESIRDRFERTPLTSGGKPVTHYRFADSKAEPGIQLSD 295 DFS FYM I F NS H+ D E SI + E+ + G + + +Y FADSK+E IQLSD Sbjct: 238 DFSQFYMRPIYTFINSTHIFDKENSIEELLEKQIIMDGPRQINNYSFADSKSEQLIQLSD 297 Query: 296 IVVGVLGKMHTYFTETAAEEIAADRAGLAGTSLQNAELLRDLISASHVANIAFLNHVSSL 355 +VVG+LGK+ +Y E+I +D L +N +LL +LI+ S N+ FL+ + Sbjct: 298 VVVGILGKLGSYCNTNDKEKIYSDMHSLNSLQEENIDLLLNLIAESRDRNMGFLHAIDCY 357 Query: 356 HDLDKLDLFLRFYDGAHA 373 ++ K+D+ + G A Sbjct: 358 EEMSKMDIIIECRQGICA 375