BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0173.0023.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_532183.1| hypothetical protein RPC_2310 [Rhodopseudomonas... 401 e-110 ref|YP_782208.1| hypothetical protein RPE_3295 [Rhodopseudomonas... 398 e-109 ref|YP_577595.1| hypothetical protein Nham_2343 [Nitrobacter ham... 379 e-103 ref|YP_004632642.1| hypothetical protein OCA5_c16870 [Oligotroph... 377 e-102 ref|YP_002289334.1| SurA N- domain family [Oligotropha carboxido... 376 e-102 >ref|YP_532183.1| hypothetical protein RPC_2310 [Rhodopseudomonas palustris BisB18] gb|ABD87864.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 320 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/292 (67%), Positives = 238/292 (81%), Gaps = 5/292 (1%) Query: 9 FLLLGSGARLHAQTIAVMVNGEPITNYDIEQRAKLNALTGGKTPDRKTVLDELIDEKLKI 68 L + G LHAQ++AVMVNGEPITNYDIEQR+KL AL+ K+P R+ V+DELI+EK+KI Sbjct: 31 MLAICLGPDLHAQSVAVMVNGEPITNYDIEQRSKLMALSTHKSPSRQQVIDELINEKVKI 90 Query: 69 KEAKKFGVDPSAGDIDQSFGGMAQRMRLSGDQLTKVLEGKGIRPDTLKQRIRADMVWTSL 128 +E KKFG+DPS DID SF GM RMR+S +QLTK LEG+GIRP+TLKQR+RA+MVWTSL Sbjct: 91 REGKKFGIDPSVADIDGSFAGMGSRMRMSAEQLTKSLEGQGIRPETLKQRMRAEMVWTSL 150 Query: 129 VRGRFKESLQVGEKDVANAVKETGG--AVEAEAFEYRMQPVVLIVPRGAPQSEFEGRRKE 186 VRGRFK+SL VGEK+V A+ GG E+FEY+M+P+VLIVPR A S E R KE Sbjct: 151 VRGRFKDSLLVGEKEVRAAL---GGDDKSSGESFEYQMRPIVLIVPRNAAPSARELRMKE 207 Query: 187 ADSLRERVTSCEEANTSFKSMRNAAIREIVVKTSADLPQSLRDILDKTPVGHLTPPEVTK 246 A++LR RV SC EA+ FKSM+NAAIR+ V KTSAD+P LR++LDKTP+GHLT PEVTK Sbjct: 208 AEALRSRVQSCAEADDLFKSMQNAAIRDTVTKTSADIPGVLREVLDKTPIGHLTAPEVTK 267 Query: 247 QGIEMVALCGRKATTVDTPKKREMRDKMYVQKYEAKSKAYLQEVRKAAMIEY 298 QG+EMVALC RK TT DTPKKRE+RDKM+ K+EAKSK+YL++VRKAAMIEY Sbjct: 268 QGVEMVALCSRKPTTADTPKKREIRDKMFADKFEAKSKSYLRDVRKAAMIEY 319 >ref|YP_782208.1| hypothetical protein RPE_3295 [Rhodopseudomonas palustris BisA53] gb|ABJ07228.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 305 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 192/297 (64%), Positives = 233/297 (78%), Gaps = 1/297 (0%) Query: 2 LSFLLALFLLLGSGARLHAQTIAVMVNGEPITNYDIEQRAKLNALTGGKTPDRKTVLDEL 61 L F AL L G L AQ++ VMVNGEPIT+YDI+QR+KL L+ KTP R+ V++EL Sbjct: 9 LCFAFALLLTTGLSTELRAQSVVVMVNGEPITSYDIDQRSKLTQLSTRKTPPRQEVIEEL 68 Query: 62 IDEKLKIKEAKKFGVDPSAGDIDQSFGGMAQRMRLSGDQLTKVLEGKGIRPDTLKQRIRA 121 I+EK+KIKE KKFG+DPS DID SF M RMR+S +QLT+ L GIRPDTLK R+RA Sbjct: 69 INEKVKIKEGKKFGIDPSGADIDSSFANMGSRMRMSPEQLTQTLANSGIRPDTLKHRMRA 128 Query: 122 DMVWTSLVRGRFKESLQVGEKDVANAVKETGGAVEAEAFEYRMQPVVLIVPRGAPQSEFE 181 +MVWTSLVRGRFK+SL VGEKD+ A+ ++ E+FEY+M+PVVLIVPR A + E Sbjct: 129 EMVWTSLVRGRFKDSLLVGEKDIQAALGDSDKPA-GESFEYQMRPVVLIVPRNAAPASRE 187 Query: 182 GRRKEADSLRERVTSCEEANTSFKSMRNAAIREIVVKTSADLPQSLRDILDKTPVGHLTP 241 R KEA++LR RV +CEEAN FKSM NAAIR V KTSADLP SLR++LDKTP+GHLT Sbjct: 188 ARMKEAEALRARVQTCEEANALFKSMPNAAIRATVSKTSADLPPSLRELLDKTPIGHLTA 247 Query: 242 PEVTKQGIEMVALCGRKATTVDTPKKREMRDKMYVQKYEAKSKAYLQEVRKAAMIEY 298 PE TKQG+EMVALC RK TT DTPKKRE+R+KM+ +K+EAKSKAYL++VRKAAM+EY Sbjct: 248 PEATKQGVEMVALCSRKPTTADTPKKREIREKMFAEKFEAKSKAYLRDVRKAAMVEY 304 >ref|YP_577595.1| hypothetical protein Nham_2343 [Nitrobacter hamburgensis X14] gb|ABE63135.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 319 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/300 (62%), Positives = 244/300 (81%), Gaps = 4/300 (1%) Query: 6 LALFLLLGSG---ARLHAQTIAVMVNGEPITNYDIEQRAKLNALTGGKTPDRKTVLDELI 62 LALF +L A LHAQ++AVMVNGEPIT++DIEQR++L ++ KTP R+ V+DELI Sbjct: 13 LALFAVLSFACLNAPLHAQSVAVMVNGEPITSFDIEQRSRLIQISTHKTPTRQQVIDELI 72 Query: 63 DEKLKIKEAKKFGVDPSAGDIDQSFGGMAQRMRLSGDQLTKVLEGKGIRPDTLKQRIRAD 122 +EK+K+KEAKKFGV+P++ DIDQ + M RMR+S +QLTK L +G+RPDT+K R++AD Sbjct: 73 NEKVKVKEAKKFGVNPTSADIDQQYASMGARMRMSPEQLTKSLASQGVRPDTIKARLKAD 132 Query: 123 MVWTSLVRGRFKESLQVGEKDVANAVKETG-GAVEAEAFEYRMQPVVLIVPRGAPQSEFE 181 +VW SLVRGRFK+SL V ++DV A++ +G + E FEY+M+PVVL+VPRGA S E Sbjct: 133 LVWGSLVRGRFKDSLLVSDRDVNEALRNSGEDQSKTEGFEYQMRPVVLVVPRGAAASVME 192 Query: 182 GRRKEADSLRERVTSCEEANTSFKSMRNAAIREIVVKTSADLPQSLRDILDKTPVGHLTP 241 RRKEAD+LRERV SC +A FK+MRNA IRE VVKTSADLP +RD+LDKTPVGHLTP Sbjct: 193 SRRKEADALRERVQSCADATRIFKAMRNATIRETVVKTSADLPPPIRDLLDKTPVGHLTP 252 Query: 242 PEVTKQGIEMVALCGRKATTVDTPKKREMRDKMYVQKYEAKSKAYLQEVRKAAMIEYPGG 301 PE+T+QG+EMVA+CG+KAT+VDTPKK+E+R+KM+ +KYE KSK YL+++RK+AMIEY G Sbjct: 253 PEITRQGVEMVAICGKKATSVDTPKKKEIREKMFAEKYEKKSKDYLEDIRKSAMIEYRQG 312 >ref|YP_004632642.1| hypothetical protein OCA5_c16870 [Oligotropha carboxidovorans OM5] gb|AEI02825.1| hypothetical protein OCA4_c16870 [Oligotropha carboxidovorans OM4] gb|AEI06401.1| hypothetical protein OCA5_c16870 [Oligotropha carboxidovorans OM5] Length = 320 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 182/298 (61%), Positives = 228/298 (76%), Gaps = 2/298 (0%) Query: 2 LSFLLALFLLLGSGA-RLHAQTIAVMVNGEPITNYDIEQRAKLNALTGGKTPDRKTVLDE 60 ++ A F++L A + AQ I VMVNGEPIT YDIEQR KL LT K P R+ L E Sbjct: 21 IALAFAAFIILAVTAPSVQAQGIVVMVNGEPITTYDIEQRTKLITLTTRKAPTRQQALQE 80 Query: 61 LIDEKLKIKEAKKFGVDPSAGDIDQSFGGMAQRMRLSGDQLTKVLEGKGIRPDTLKQRIR 120 LID++LKIKEAKKFGVD SA D+D +F GMAQRMR+S DQL +VL+ +G+RPDT+K R++ Sbjct: 81 LIDDRLKIKEAKKFGVDLSASDVDSAFAGMAQRMRISSDQLAQVLQAQGVRPDTMKFRLK 140 Query: 121 ADMVWTSLVRGRFKESLQVGEKDVANAVKETGGAVEAEAFEYRMQPVVLIVPRGAPQSEF 180 AD W +LVRGRFK+SL VGE+DV AV E E++EY M+P+VL VPRG+ Sbjct: 141 ADTAWGALVRGRFKQSLLVGERDVQAAVGENPSGERTESYEYHMRPIVLFVPRGS-SGAV 199 Query: 181 EGRRKEADSLRERVTSCEEANTSFKSMRNAAIREIVVKTSADLPQSLRDILDKTPVGHLT 240 E R+KEA++LRER+ SCEEA FKS+R A+IR+ +VKTSADLP +LR++LDKTPVG +T Sbjct: 200 EQRKKEAEALRERIQSCEEATRVFKSLRQASIRDTIVKTSADLPPNLRELLDKTPVGRMT 259 Query: 241 PPEVTKQGIEMVALCGRKATTVDTPKKREMRDKMYVQKYEAKSKAYLQEVRKAAMIEY 298 PEVT+QGIEMVALC R+ TT DTP KR RDK++ QKYEAKSK+YL+++RK AMIEY Sbjct: 260 APEVTRQGIEMVALCNRQVTTADTPAKRAARDKLFAQKYEAKSKSYLEDLRKRAMIEY 317 >ref|YP_002289334.1| SurA N- domain family [Oligotropha carboxidovorans OM5] gb|ACI93469.1| SurA N- domain family [Oligotropha carboxidovorans OM5] Length = 330 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 182/298 (61%), Positives = 228/298 (76%), Gaps = 2/298 (0%) Query: 2 LSFLLALFLLLGSGA-RLHAQTIAVMVNGEPITNYDIEQRAKLNALTGGKTPDRKTVLDE 60 ++ A F++L A + AQ I VMVNGEPIT YDIEQR KL LT K P R+ L E Sbjct: 31 IALAFAAFIILAVTAPSVQAQGIVVMVNGEPITTYDIEQRTKLITLTTRKAPTRQQALQE 90 Query: 61 LIDEKLKIKEAKKFGVDPSAGDIDQSFGGMAQRMRLSGDQLTKVLEGKGIRPDTLKQRIR 120 LID++LKIKEAKKFGVD SA D+D +F GMAQRMR+S DQL +VL+ +G+RPDT+K R++ Sbjct: 91 LIDDRLKIKEAKKFGVDLSASDVDSAFAGMAQRMRISSDQLAQVLQAQGVRPDTMKFRLK 150 Query: 121 ADMVWTSLVRGRFKESLQVGEKDVANAVKETGGAVEAEAFEYRMQPVVLIVPRGAPQSEF 180 AD W +LVRGRFK+SL VGE+DV AV E E++EY M+P+VL VPRG+ Sbjct: 151 ADTAWGALVRGRFKQSLLVGERDVQAAVGENPSGERTESYEYHMRPIVLFVPRGS-SGAV 209 Query: 181 EGRRKEADSLRERVTSCEEANTSFKSMRNAAIREIVVKTSADLPQSLRDILDKTPVGHLT 240 E R+KEA++LRER+ SCEEA FKS+R A+IR+ +VKTSADLP +LR++LDKTPVG +T Sbjct: 210 EQRKKEAEALRERIQSCEEATRVFKSLRQASIRDTIVKTSADLPPNLRELLDKTPVGRMT 269 Query: 241 PPEVTKQGIEMVALCGRKATTVDTPKKREMRDKMYVQKYEAKSKAYLQEVRKAAMIEY 298 PEVT+QGIEMVALC R+ TT DTP KR RDK++ QKYEAKSK+YL+++RK AMIEY Sbjct: 270 APEVTRQGIEMVALCNRQVTTADTPAKRAARDKLFAQKYEAKSKSYLEDLRKRAMIEY 327