BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0173.0019.p (365 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001205351.1| putative permease [Bradyrhizobium sp. ORS 27... 664 0.0 ref|YP_001239812.1| putative permease [Bradyrhizobium sp. BTAi1]... 664 0.0 ref|NP_770746.1| permease [Bradyrhizobium japonicum USDA 110] >g... 654 0.0 ref|ZP_01047303.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] ... 649 0.0 ref|YP_318291.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb... 648 0.0 >ref|YP_001205351.1| putative permease [Bradyrhizobium sp. ORS 278] emb|CAL77120.1| putative permease [Bradyrhizobium sp. ORS 278] Length = 365 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/365 (89%), Positives = 347/365 (95%) Query: 1 MSMVTNTLGRYFAGRFVVAAVGVFAGIFVLLVLVDYIEMVRKTSGLVSASAITVAETSLF 60 MSMVTNTLGRYFAGRF+V+AVGVFA IF+LLVLVDYIEMVR+TSGL SASA+ VAETSLF Sbjct: 1 MSMVTNTLGRYFAGRFLVSAVGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLF 60 Query: 61 RVPQLLEKLMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFISPALASAILLGIFAT 120 RVPQLLEK+MPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFI+PALASAI+LG+ AT Sbjct: 61 RVPQLLEKMMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFIAPALASAIVLGLMAT 120 Query: 121 TAYNPVSANLRELSKRMEAELFGSAPGGGIQDASGFWLNQINDEGQAIINAARSEQQGVR 180 T YNP+SANLRELSKRMEAELFGSAPGGG+QDASGFWLNQ+N +G IINAARSEQQGVR Sbjct: 121 TLYNPMSANLRELSKRMEAELFGSAPGGGVQDASGFWLNQLNPDGSVIINAARSEQQGVR 180 Query: 181 LTGLTVFRFDTTLQFKERIEAREAALEDGRWVFKSVRRFTLDKPPVDQDTFYLTTTLTPA 240 LTGLT+FRFDT +FK+RIEAREA+LEDG+WVFKSVRRF+LD PPVD+ TF L TTLTPA Sbjct: 181 LTGLTLFRFDTKNRFKDRIEAREASLEDGQWVFKSVRRFSLDAPPVDEPTFILPTTLTPA 240 Query: 241 QVRNSFSTPETVSFWQLPNYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 QVRNSFSTPETVSFWQLP+YIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL Sbjct: 241 QVRNSFSTPETVSFWQLPSYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 Query: 301 RFFRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAELMHPIAAAWLPVVVGSLTGFLALL 360 RFFRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKA LM PIAAAWLPV VG LTGF+ALL Sbjct: 301 RFFRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAALMDPIAAAWLPVFVGGLTGFMALL 360 Query: 361 YQEDG 365 YQEDG Sbjct: 361 YQEDG 365 >ref|YP_001239812.1| putative permease [Bradyrhizobium sp. BTAi1] gb|ABQ35906.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 365 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/365 (89%), Positives = 344/365 (94%) Query: 1 MSMVTNTLGRYFAGRFVVAAVGVFAGIFVLLVLVDYIEMVRKTSGLVSASAITVAETSLF 60 MSMVTNTLGRYFAGRF+V+AVGVFA IFVLLVLVDYIEMVRKTSGL SASA+ VAETSLF Sbjct: 1 MSMVTNTLGRYFAGRFLVSAVGVFASIFVLLVLVDYIEMVRKTSGLASASALMVAETSLF 60 Query: 61 RVPQLLEKLMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFISPALASAILLGIFAT 120 RVPQLLEK+MPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFI+PALASAI+LG+ AT Sbjct: 61 RVPQLLEKMMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFIAPALASAIVLGLMAT 120 Query: 121 TAYNPVSANLRELSKRMEAELFGSAPGGGIQDASGFWLNQINDEGQAIINAARSEQQGVR 180 T YNP+SANLRELSKRMEAELFG+APGGG+QDASGFWLNQIN +G IINAARSEQQGVR Sbjct: 121 TLYNPMSANLRELSKRMEAELFGAAPGGGVQDASGFWLNQINPDGSVIINAARSEQQGVR 180 Query: 181 LTGLTVFRFDTTLQFKERIEAREAALEDGRWVFKSVRRFTLDKPPVDQDTFYLTTTLTPA 240 LTGLT+FRFDT FK+RIEAREA LEDG+WVFKSVRRF+LD PPVD+ TF L T+LTPA Sbjct: 181 LTGLTLFRFDTEKHFKDRIEAREATLEDGQWVFKSVRRFSLDAPPVDEPTFILPTSLTPA 240 Query: 241 QVRNSFSTPETVSFWQLPNYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 QVRNSFSTPETVSFWQLP+YIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL Sbjct: 241 QVRNSFSTPETVSFWQLPSYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 Query: 301 RFFRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAELMHPIAAAWLPVVVGSLTGFLALL 360 RFFRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKA LM PI AAWLPV VG LTGF+ALL Sbjct: 301 RFFRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAALMDPIVAAWLPVFVGGLTGFMALL 360 Query: 361 YQEDG 365 YQEDG Sbjct: 361 YQEDG 365 >ref|NP_770746.1| permease [Bradyrhizobium japonicum USDA 110] dbj|BAC49371.1| bll4106 [Bradyrhizobium japonicum USDA 110] Length = 363 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/363 (87%), Positives = 341/363 (93%) Query: 3 MVTNTLGRYFAGRFVVAAVGVFAGIFVLLVLVDYIEMVRKTSGLVSASAITVAETSLFRV 62 M+TNTLGRYFAGRFVVAA+GVFA IF+LLVLVDYIEMVRKTSGL SASAI VAETSLFRV Sbjct: 1 MLTNTLGRYFAGRFVVAALGVFASIFLLLVLVDYIEMVRKTSGLASASAIMVAETSLFRV 60 Query: 63 PQLLEKLMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFISPALASAILLGIFATTA 122 PQLLEKL PFC+LIGAMTCYLALSRRLELVVARAAGVSAWQFISPAL SA+L+G+ AT A Sbjct: 61 PQLLEKLTPFCMLIGAMTCYLALSRRLELVVARAAGVSAWQFISPALGSALLIGVIATVA 120 Query: 123 YNPVSANLRELSKRMEAELFGSAPGGGIQDASGFWLNQINDEGQAIINAARSEQQGVRLT 182 YNP+SANLRELSKRMEAELFGSAPGGGIQDASGFWLNQ+ ++GQ IINAARSEQQGVRLT Sbjct: 121 YNPMSANLRELSKRMEAELFGSAPGGGIQDASGFWLNQVTNDGQTIINAARSEQQGVRLT 180 Query: 183 GLTVFRFDTTLQFKERIEAREAALEDGRWVFKSVRRFTLDKPPVDQDTFYLTTTLTPAQV 242 GLT+FRFDT FKER+EAREA LE G+W+F++VRRF+LD PP++Q + TTLT AQV Sbjct: 181 GLTLFRFDTEQHFKERVEAREAELEVGQWIFRNVRRFSLDGPPIEQAVLAIPTTLTEAQV 240 Query: 243 RNSFSTPETVSFWQLPNYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSLRF 302 RNSFSTPETVSFWQLP+YIRSSESSGFATAGYRLQYHKL+AQPFLLAAMVMLAASVSLRF Sbjct: 241 RNSFSTPETVSFWQLPSYIRSSESSGFATAGYRLQYHKLLAQPFLLAAMVMLAASVSLRF 300 Query: 303 FRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAELMHPIAAAWLPVVVGSLTGFLALLYQ 362 FRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAELMHPIAAAWLPVVVG LTGFLALLYQ Sbjct: 301 FRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAELMHPIAAAWLPVVVGGLTGFLALLYQ 360 Query: 363 EDG 365 EDG Sbjct: 361 EDG 363 >ref|ZP_01047303.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] gb|EAQ34731.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] Length = 365 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/365 (86%), Positives = 341/365 (93%) Query: 1 MSMVTNTLGRYFAGRFVVAAVGVFAGIFVLLVLVDYIEMVRKTSGLVSASAITVAETSLF 60 MSM+TNTLGRYFAGRF+VAA+GVF IF+LLVLVDYIEMVR+TSGL SASA+ VAETSLF Sbjct: 1 MSMLTNTLGRYFAGRFLVAALGVFVSIFLLLVLVDYIEMVRRTSGLASASALVVAETSLF 60 Query: 61 RVPQLLEKLMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFISPALASAILLGIFAT 120 RVPQLLEKL PFCVLIGAMTCYLALSR+LELVVARAAGVSAWQFISPALA AI+LG AT Sbjct: 61 RVPQLLEKLTPFCVLIGAMTCYLALSRQLELVVARAAGVSAWQFISPALACAIVLGALAT 120 Query: 121 TAYNPVSANLRELSKRMEAELFGSAPGGGIQDASGFWLNQINDEGQAIINAARSEQQGVR 180 T YNP+SANLRELSKRMEAELFG GGG+QDASGFW+NQ+ D+GQAIINAARSEQQGVR Sbjct: 121 TVYNPLSANLRELSKRMEAELFGGVSGGGLQDASGFWINQVTDDGQAIINAARSEQQGVR 180 Query: 181 LTGLTVFRFDTTLQFKERIEAREAALEDGRWVFKSVRRFTLDKPPVDQDTFYLTTTLTPA 240 LTGLTVFRF+ +F+ERIEAREAALEDGRW+FK VRRFTLD PPV+Q+TF L+T+LTPA Sbjct: 181 LTGLTVFRFNPHSRFEERIEAREAALEDGRWLFKGVRRFTLDNPPVEQETFVLSTSLTPA 240 Query: 241 QVRNSFSTPETVSFWQLPNYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 QV+NSFSTPETVSFWQLP YI+SSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL Sbjct: 241 QVQNSFSTPETVSFWQLPGYIKSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 Query: 301 RFFRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAELMHPIAAAWLPVVVGSLTGFLALL 360 RFFR GGVQKMVLSGVG+GFLLYVLSKVTEDLSKAELM+PIAAAWLPV VG LTGFL LL Sbjct: 301 RFFRFGGVQKMVLSGVGSGFLLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFLVLL 360 Query: 361 YQEDG 365 YQEDG Sbjct: 361 YQEDG 365 >ref|YP_318291.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] gb|ABA04939.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] Length = 365 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/365 (86%), Positives = 341/365 (93%) Query: 1 MSMVTNTLGRYFAGRFVVAAVGVFAGIFVLLVLVDYIEMVRKTSGLVSASAITVAETSLF 60 MSM+TNTLGRYFAGRF+VAA+GVFA IF+LLVLVDYIEMVR+TSGL SASA+ VAETSLF Sbjct: 1 MSMLTNTLGRYFAGRFMVAALGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLF 60 Query: 61 RVPQLLEKLMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFISPALASAILLGIFAT 120 RVPQLLEKL PFCVLIGAMTCYLALSR+LELVVARAAGVSAWQFISP LA AI LG+FAT Sbjct: 61 RVPQLLEKLTPFCVLIGAMTCYLALSRKLELVVARAAGVSAWQFISPTLACAIALGVFAT 120 Query: 121 TAYNPVSANLRELSKRMEAELFGSAPGGGIQDASGFWLNQINDEGQAIINAARSEQQGVR 180 T YNP+S+NLRELSKRMEAE+FG A GGG+ DASGFW+NQ+ D+GQAIINAA SEQQGVR Sbjct: 121 TVYNPLSSNLRELSKRMEAEMFGGASGGGLHDASGFWINQVTDDGQAIINAALSEQQGVR 180 Query: 181 LTGLTVFRFDTTLQFKERIEAREAALEDGRWVFKSVRRFTLDKPPVDQDTFYLTTTLTPA 240 LTGLTVFRFD +F+ERIEAREAALEDGRW+FK VRRFTLD PPV+Q+TF L T+LTPA Sbjct: 181 LTGLTVFRFDPDSRFRERIEAREAALEDGRWLFKGVRRFTLDNPPVEQETFVLPTSLTPA 240 Query: 241 QVRNSFSTPETVSFWQLPNYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 QV+NSFSTPETVSFWQLP+YIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL Sbjct: 241 QVQNSFSTPETVSFWQLPDYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 Query: 301 RFFRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAELMHPIAAAWLPVVVGSLTGFLALL 360 RFFR GGVQKMVLSGVG+GFLLYVLSKVTEDLSKAELM+PIAAAWLPV VG LTGFL LL Sbjct: 301 RFFRFGGVQKMVLSGVGSGFLLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFLVLL 360 Query: 361 YQEDG 365 +QEDG Sbjct: 361 HQEDG 365