BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0173.0015.p (168 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_570090.1| hypothetical protein RPD_2963 [Rhodopseudomonas... 231 2e-59 ref|YP_486099.1| hypothetical protein RPB_2483 [Rhodopseudomonas... 219 1e-55 ref|YP_577589.1| hypothetical protein Nham_2337 [Nitrobacter ham... 200 5e-50 ref|YP_004108693.1| hypothetical protein Rpdx1_2369 [Rhodopseudo... 195 1e-48 ref|ZP_01047299.1| hypothetical protein NB311A_19100 [Nitrobacte... 195 2e-48 >ref|YP_570090.1| hypothetical protein RPD_2963 [Rhodopseudomonas palustris BisB5] gb|ABE40189.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 181 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 114/168 (67%), Positives = 141/168 (83%), Gaps = 3/168 (1%) Query: 1 LLVLAPGLAGCSGAGSDLFSRDAEWFSRPGRVFIRNISIESPPLTPDKPVTNDDLVSADG 60 L++ AP LAGCSGA S+L SRDA+WFSRPGRVFI+NISIE+PPLTPDKPV +DL+SADG Sbjct: 14 LVLAAPLLAGCSGA-SELMSRDADWFSRPGRVFIKNISIETPPLTPDKPVMAEDLISADG 72 Query: 61 SCPGMAPPPGAADANAQAGG--APPPQPTGGSVALGHTECDVVRGIGAPDSVNLSSGPGG 118 CPGM+ PG+ DAN+ GG A P P GG+VALGHTECDV RG GAPDSVNLS+ G Sbjct: 73 MCPGMSAAPGSPDANSAPGGDAAAPTTPRGGTVALGHTECDVARGAGAPDSVNLSTNERG 132 Query: 119 ERVAVVTWSRGARAGIYTFSSGRLSSVERGPDPVPEPKQAKPKKKKTS 166 +RVA++ +SRG+RAGIYTF++GRL+S+ERGPDPV +PK A+PK++K + Sbjct: 133 QRVALLNYSRGSRAGIYTFTAGRLTSIERGPDPVAQPKSARPKRQKQA 180 >ref|YP_486099.1| hypothetical protein RPB_2483 [Rhodopseudomonas palustris HaA2] gb|ABD07188.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 178 Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 113/166 (68%), Positives = 135/166 (81%), Gaps = 6/166 (3%) Query: 2 LVLA-PGLAGCSGAGSDLFSRDAEWFSRPGRVFIRNISIESPPLTPDKPVTNDDLVSADG 60 LVLA P LAGC+G GSDL SRDA+WF+RPGRVFI+NISIE+PPLTPDK VT +DL+SADG Sbjct: 14 LVLATPLLAGCAG-GSDLLSRDADWFARPGRVFIKNISIETPPLTPDKAVTAEDLISADG 72 Query: 61 SCPGMAPPPGAADANAQAGGAPPPQPT---GGSVALGHTECDVVRGIGAPDSVNLSSGPG 117 CPGMA P GAADANA A G P T GG+VALGHTECDV RG GAPD VNLS+ Sbjct: 73 MCPGMAQP-GAADANANAQGGDPAASTMARGGTVALGHTECDVARGAGAPDGVNLSTNER 131 Query: 118 GERVAVVTWSRGARAGIYTFSSGRLSSVERGPDPVPEPKQAKPKKK 163 G+RVA++T+SRG RAGIYTF++GRL+S+ER P+P P+P+ AK + + Sbjct: 132 GQRVALLTYSRGPRAGIYTFTAGRLTSIERAPEPAPQPRAAKKRSR 177 >ref|YP_577589.1| hypothetical protein Nham_2337 [Nitrobacter hamburgensis X14] gb|ABE63129.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 182 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 107/175 (61%), Positives = 131/175 (74%), Gaps = 11/175 (6%) Query: 1 LLVLAPGLAGCSGAG----SDLFSRDAEWFSRPGRVFIRNISIESPPLTPDKPVTNDDLV 56 LL++AP ++GC A SDL S+DA WFSR GR+FI+N+SIE+PPLTP KPVT DDL+ Sbjct: 3 LLLIAPLVSGCGSASDMFSSDLLSKDANWFSRSGRLFIKNVSIETPPLTPSKPVTPDDLI 62 Query: 57 SADGSCPGMAPPPGAADANA----QAGGAPPPQ---PTGGSVALGHTECDVVRGIGAPDS 109 SADG CPGMAPP GA +++A AGG P P G+VALGHTECDV RGIGAPD+ Sbjct: 63 SADGLCPGMAPPIGAGESSALSDGAAGGPTTPASVAPATGTVALGHTECDVTRGIGAPDN 122 Query: 110 VNLSSGPGGERVAVVTWSRGARAGIYTFSSGRLSSVERGPDPVPEPKQAKPKKKK 164 V+LS+ P G RVAV+T+ +G AGIYTFS+GRLSS+ER P+PV PK + KKK Sbjct: 123 VSLSNDPHGARVAVLTFLKGPHAGIYTFSAGRLSSIERAPEPVAPPKPERRVKKK 177 >ref|YP_004108693.1| hypothetical protein Rpdx1_2369 [Rhodopseudomonas palustris DX-1] gb|ADU43960.1| hypothetical protein Rpdx1_2369 [Rhodopseudomonas palustris DX-1] Length = 212 Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 101/168 (60%), Positives = 123/168 (73%), Gaps = 3/168 (1%) Query: 1 LLVLAPGLAGCSGAGSDLFSRDAEWFSRPGRVFIRNISIESPPLTPDKPVTNDDLVSADG 60 L V P LAGCSG + SRDAEWFS+PGRVFI+NISIE+PPLTPDKP+T DDLVSADG Sbjct: 48 LAVAGPLLAGCSGT-PEFLSRDAEWFSKPGRVFIKNISIETPPLTPDKPITPDDLVSADG 106 Query: 61 SCPGMAPPPGAADANAQAGGAPPPQPTGGSVALGHTECDVVRGIGAPDSVNLSSGPGGER 120 CPGMAP PG D NA G P GG+VALGHTECDV RG+GAPD V+LS+ G+R Sbjct: 107 RCPGMAPAPG--DPNAPQDGQVTPLSQGGTVALGHTECDVARGLGAPDHVSLSTNERGDR 164 Query: 121 VAVVTWSRGARAGIYTFSSGRLSSVERGPDPVPEPKQAKPKKKKTSHG 168 V+T++RG R GIY F++GRL+S+ER + PE + A+ K++ G Sbjct: 165 STVLTYNRGPRPGIYAFTAGRLTSIERVQEAAPERRPARGKRRSAQSG 212 >ref|ZP_01047299.1| hypothetical protein NB311A_19100 [Nitrobacter sp. Nb-311A] gb|EAQ34727.1| hypothetical protein NB311A_19100 [Nitrobacter sp. Nb-311A] Length = 176 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 103/175 (58%), Positives = 133/175 (76%), Gaps = 12/175 (6%) Query: 1 LLVLAPGLAGCSGAGSDLFS-----RDAEWFSRPGRVFIRNISIESPPLTPDKPVTNDDL 55 LL++AP ++GC G+ SD+FS +DAEWFSR GRVFI+N+SIE+PPLTPDKPVT DDL Sbjct: 3 LLLMAPLVSGC-GSASDMFSTGLLSKDAEWFSRSGRVFIKNVSIEAPPLTPDKPVTPDDL 61 Query: 56 VSADGSCPGMAPPPGAADANAQAGG-----APPPQPTGGSVALGHTECDVVRGIG-APDS 109 +SADG CPGMAPP G +++A + P G+VALGHTECDV RGIG APD+ Sbjct: 62 ISADGLCPGMAPPIGTGESSALSDSSADAPTTPAFAASGTVALGHTECDVTRGIGAAPDN 121 Query: 110 VNLSSGPGGERVAVVTWSRGARAGIYTFSSGRLSSVERGPDPVPEPKQAKPKKKK 164 V+LS+ PGG+RVAV+T+ +G RAGIYTF++GRLSS+ER P+P PK + K++ Sbjct: 122 VHLSNNPGGDRVAVLTFLKGPRAGIYTFTAGRLSSIERAPEPAASPKLERRAKRR 176