BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0173.0006.p (225 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_782195.1| hypothetical protein RPE_3282 [Rhodopseudomonas... 362 3e-98 ref|YP_532201.1| hypothetical protein RPC_2328 [Rhodopseudomonas... 360 1e-97 ref|NP_770763.1| hypothetical protein bll4123 [Bradyrhizobium ja... 353 1e-95 ref|YP_570081.1| hypothetical protein RPD_2953 [Rhodopseudomonas... 347 6e-94 ref|YP_486107.1| hypothetical protein RPB_2491 [Rhodopseudomonas... 343 7e-93 >ref|YP_782195.1| hypothetical protein RPE_3282 [Rhodopseudomonas palustris BisA53] gb|ABJ07215.1| regulatory inactivation of DnaA Hda protein [Rhodopseudomonas palustris BisA53] Length = 224 Score = 362 bits (928), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 178/220 (80%), Positives = 195/220 (88%) Query: 6 QPRQLALALPHEEKLTRDDFLEGPANEAALALIDGWPDWPNRIMLLVGPDGSGKSHLAAI 65 QPRQLALALPH E L+RDDFLEGPAN AL+L+D WPDWPNR+MLL GP+GSGKSHLAAI Sbjct: 5 QPRQLALALPHAESLSRDDFLEGPANRVALSLVDHWPDWPNRVMLLSGPEGSGKSHLAAI 64 Query: 66 WAESAGARSTAAHALTAEAVPTALATGALVVEDLRPADFDERAMFHLMNLARQDDAYVLI 125 WAE AGARS +A ALT+ AVP AL TGALVVEDL P FDERA+FHLMNLAR+D AYVLI Sbjct: 65 WAEQAGARSISAQALTSAAVPAALTTGALVVEDLTPGGFDERALFHLMNLAREDQAYVLI 124 Query: 126 TARVPPSAFEIELRDLRSRLRAVPTVTLLPPDDQLFRGLIVKFCADRQMSVDEPLVSYLS 185 TAR+PP AFEI+LRDLRSRLRAVP + LLPPDDQLFR LIVKFCADRQMSVDE LVS+L+ Sbjct: 125 TARIPPVAFEIDLRDLRSRLRAVPVLELLPPDDQLFRALIVKFCADRQMSVDEALVSFLA 184 Query: 186 NRIERSYVAVRQAVELLDTEALRLGRPVTRALAAELLRDA 225 NRI+RS+ A R+AVE LDTEALRLGRPVTRALAAEL RDA Sbjct: 185 NRIDRSFAAARRAVEKLDTEALRLGRPVTRALAAELFRDA 224 >ref|YP_532201.1| hypothetical protein RPC_2328 [Rhodopseudomonas palustris BisB18] gb|ABD87882.1| regulatory inactivation of DnaA Hda protein [Rhodopseudomonas palustris BisB18] Length = 225 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 175/220 (79%), Positives = 196/220 (89%) Query: 5 VQPRQLALALPHEEKLTRDDFLEGPANEAALALIDGWPDWPNRIMLLVGPDGSGKSHLAA 64 VQPRQLALALPH E L+RDDFLEGP+N AL LID WPDWPNR+MLL GP+GSGKSHL++ Sbjct: 5 VQPRQLALALPHAESLSRDDFLEGPSNSEALKLIDHWPDWPNRVMLLTGPEGSGKSHLSS 64 Query: 65 IWAESAGARSTAAHALTAEAVPTALATGALVVEDLRPADFDERAMFHLMNLARQDDAYVL 124 IWAE AGAR+ AHALT+ AVP ALATGALVVEDL P DERA+FHL+NLAR+D AYVL Sbjct: 65 IWAEQAGARAITAHALTSSAVPGALATGALVVEDLCPPCIDERALFHLLNLAREDQAYVL 124 Query: 125 ITARVPPSAFEIELRDLRSRLRAVPTVTLLPPDDQLFRGLIVKFCADRQMSVDEPLVSYL 184 IT+R+PPSA E++LRDLRSRLRAVP VTLLPPDDQLFR LIVKFCADRQMSVDE LVS++ Sbjct: 125 ITSRLPPSALEVDLRDLRSRLRAVPAVTLLPPDDQLFRALIVKFCADRQMSVDESLVSFV 184 Query: 185 SNRIERSYVAVRQAVELLDTEALRLGRPVTRALAAELLRD 224 +NRI+RS++A RQAVE LDTEALRLGRPVTRALAAEL RD Sbjct: 185 ANRIDRSFIAARQAVERLDTEALRLGRPVTRALAAELFRD 224 >ref|NP_770763.1| hypothetical protein bll4123 [Bradyrhizobium japonicum USDA 110] dbj|BAC49388.1| bll4123 [Bradyrhizobium japonicum USDA 110] Length = 225 Score = 353 bits (905), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 175/225 (77%), Positives = 194/225 (86%) Query: 1 VASSVQPRQLALALPHEEKLTRDDFLEGPANEAALALIDGWPDWPNRIMLLVGPDGSGKS 60 +A V PRQLA +LPH E L+RD+FLEGPAN A LALIDGWP+WPNRIM L GP+GSGKS Sbjct: 1 MAGRVHPRQLAFSLPHAESLSRDNFLEGPANAAGLALIDGWPEWPNRIMWLAGPEGSGKS 60 Query: 61 HLAAIWAESAGARSTAAHALTAEAVPTALATGALVVEDLRPADFDERAMFHLMNLARQDD 120 HLAAIWAE AGARST A+AL+A VP ALATGALVVEDL+ DFDERA+FHLMNLAR+D Sbjct: 61 HLAAIWAEEAGARSTTANALSAAGVPGALATGALVVEDLKAKDFDERALFHLMNLAREDG 120 Query: 121 AYVLITARVPPSAFEIELRDLRSRLRAVPTVTLLPPDDQLFRGLIVKFCADRQMSVDEPL 180 AYVL T R P+A +IEL DLRSRLRAVP V LLPPDDQLFRGLIVKFCADRQ++VDE + Sbjct: 121 AYVLFTGRDVPAALDIELNDLRSRLRAVPVVMLLPPDDQLFRGLIVKFCADRQLTVDESV 180 Query: 181 VSYLSNRIERSYVAVRQAVELLDTEALRLGRPVTRALAAELLRDA 225 VSYL+ R+ERS A RQAVELLD+EALRLGRPVTRALAAELLRDA Sbjct: 181 VSYLATRLERSSAAARQAVELLDSEALRLGRPVTRALAAELLRDA 225 >ref|YP_570081.1| hypothetical protein RPD_2953 [Rhodopseudomonas palustris BisB5] gb|ABE40180.1| regulatory inactivation of DnaA Hda protein [Rhodopseudomonas palustris BisB5] Length = 225 Score = 347 bits (891), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 175/224 (78%), Positives = 192/224 (85%) Query: 1 VASSVQPRQLALALPHEEKLTRDDFLEGPANEAALALIDGWPDWPNRIMLLVGPDGSGKS 60 +A VQPRQLAL LPH E L+R+DFLEG AN AAL LI+ WPDWPNRIMLLVGP+GSGKS Sbjct: 1 MAVRVQPRQLALDLPHAESLSREDFLEGTANTAALKLIESWPDWPNRIMLLVGPEGSGKS 60 Query: 61 HLAAIWAESAGARSTAAHALTAEAVPTALATGALVVEDLRPADFDERAMFHLMNLARQDD 120 HLA+IWAE AGARST+A ALT VP LATGALVVEDL P FDERA+FHLMNLAR+D+ Sbjct: 61 HLASIWAEQAGARSTSAQALTPANVPGELATGALVVEDLTPGSFDERALFHLMNLAREDE 120 Query: 121 AYVLITARVPPSAFEIELRDLRSRLRAVPTVTLLPPDDQLFRGLIVKFCADRQMSVDEPL 180 AYVLITAR+ PSAF ELRDLRSRLRAVP V+LL PDD LFR LIVKFCADRQMS+D L Sbjct: 121 AYVLITARLAPSAFPAELRDLRSRLRAVPVVSLLAPDDALFRALIVKFCADRQMSIDANL 180 Query: 181 VSYLSNRIERSYVAVRQAVELLDTEALRLGRPVTRALAAELLRD 224 V YL+NRI+RS+ A RQAVE LDTEALRLGRPVTRALAAELLR+ Sbjct: 181 VGYLANRIDRSFAAARQAVERLDTEALRLGRPVTRALAAELLRE 224 >ref|YP_486107.1| hypothetical protein RPB_2491 [Rhodopseudomonas palustris HaA2] gb|ABD07196.1| regulatory inactivation of DnaA Hda protein [Rhodopseudomonas palustris HaA2] Length = 225 Score = 343 bits (881), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 170/220 (77%), Positives = 191/220 (86%) Query: 5 VQPRQLALALPHEEKLTRDDFLEGPANEAALALIDGWPDWPNRIMLLVGPDGSGKSHLAA 64 VQPRQLAL LPH E L+R+DFLEG AN +AL LI+ WPDWPNRIMLLVGP+GSGKSHLA+ Sbjct: 5 VQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKSHLAS 64 Query: 65 IWAESAGARSTAAHALTAEAVPTALATGALVVEDLRPADFDERAMFHLMNLARQDDAYVL 124 IWAE AGARST+A ALTA VP LATGALVVEDL P FDERA+FHL+NLAR+D+AYVL Sbjct: 65 IWAEQAGARSTSAQALTAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDEAYVL 124 Query: 125 ITARVPPSAFEIELRDLRSRLRAVPTVTLLPPDDQLFRGLIVKFCADRQMSVDEPLVSYL 184 ITAR+ P+AF +LRDLRSRLRAVP VTLLPPDD LFR LIVKFCADRQMS+D LV YL Sbjct: 125 ITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDALFRALIVKFCADRQMSIDANLVGYL 184 Query: 185 SNRIERSYVAVRQAVELLDTEALRLGRPVTRALAAELLRD 224 +NRI+RS+ A RQ VE LDTEALRLGRPVTRALAA++LR+ Sbjct: 185 ANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRN 224