BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0172.0016.p         (136 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_568491.1| hypothetical protein RPD_1352 [Rhodopseudomonas...   162   2e-38
ref|YP_004110741.1| hypothetical protein Rpdx1_4457 [Rhodopseudo...   159   2e-37
ref|NP_949575.1| hypothetical protein RPA4239 [Rhodopseudomonas ...   158   2e-37
ref|YP_001993684.1| hypothetical protein Rpal_4718 [Rhodopseudom...   157   4e-37
ref|YP_484993.1| hypothetical protein RPB_1372 [Rhodopseudomonas...   157   6e-37

>ref|YP_568491.1| hypothetical protein RPD_1352 [Rhodopseudomonas palustris BisB5]
 gb|ABE38590.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 159

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/136 (58%), Positives = 93/136 (68%)

Query: 1   MNRAAFKPLQNTALPHSFRQVRLERAREHDHPEGASAIGYVIVAPLDTTSRIDVETWRAN 60
           M + +   + N++LP  FRQ+RLE ARE  HPEG S I YVIVAPLD   RID ETW+ +
Sbjct: 24  MTKGSPSAILNSSLPARFRQIRLELAREPGHPEGESRIAYVIVAPLDENDRIDAETWKKH 83

Query: 61  RDACRVIRQRPGEDDQLGHLVHGPADSWRFHYDVAGATADEAGFHFGSEPFRVGEYVSVH 120
           R+ACRV RQRP + D LGHLVH P  SW F YD A    DEAG+HFG E F  GEYVS+ 
Sbjct: 84  REACRVARQRPQQPDSLGHLVHRPGGSWAFQYDAAANIPDEAGYHFGDERFVQGEYVSIR 143

Query: 121 EADGMHPYRVVAVTPL 136
           E   MH +RVVAV+ L
Sbjct: 144 EEGDMHTFRVVAVSRL 159


>ref|YP_004110741.1| hypothetical protein Rpdx1_4457 [Rhodopseudomonas palustris DX-1]
 gb|ADU46008.1| hypothetical protein Rpdx1_4457 [Rhodopseudomonas palustris DX-1]
          Length = 136

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 77/136 (56%), Positives = 92/136 (67%)

Query: 1   MNRAAFKPLQNTALPHSFRQVRLERAREHDHPEGASAIGYVIVAPLDTTSRIDVETWRAN 60
           M +A    + NT+LP  FRQ+RLE ARE  HPEG + I YVIVAPLD+  RID E W+ +
Sbjct: 1   MTKATPSTILNTSLPACFRQIRLELAREPGHPEGEANIAYVIVAPLDSDDRIDAEIWKKH 60

Query: 61  RDACRVIRQRPGEDDQLGHLVHGPADSWRFHYDVAGATADEAGFHFGSEPFRVGEYVSVH 120
           R+ACRV RQRP + D LGHLVH P  SW F YD A    DEAG+HF  E F  GEYVS+ 
Sbjct: 61  REACRVARQRPRQSDSLGHLVHRPGGSWAFQYDSAANLPDEAGYHFADERFVQGEYVSLR 120

Query: 121 EADGMHPYRVVAVTPL 136
           E   MH +RVV+V+ L
Sbjct: 121 EEGDMHTFRVVSVSRL 136


>ref|NP_949575.1| hypothetical protein RPA4239 [Rhodopseudomonas palustris CGA009]
 emb|CAE29680.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 153

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 77/136 (56%), Positives = 91/136 (66%)

Query: 1   MNRAAFKPLQNTALPHSFRQVRLERAREHDHPEGASAIGYVIVAPLDTTSRIDVETWRAN 60
           M +     + NT+LP SFRQ+RLE ARE  HPEG + I YVI+APLD   RID E W+ +
Sbjct: 18  MTKVTPSAILNTSLPASFRQIRLELAREPGHPEGEANIAYVIIAPLDGNDRIDAEIWKKH 77

Query: 61  RDACRVIRQRPGEDDQLGHLVHGPADSWRFHYDVAGATADEAGFHFGSEPFRVGEYVSVH 120
           R+ACRV RQRP + D LGHLVH P  SW F YD A    DEAG+HF  E F  GEYVS+ 
Sbjct: 78  REACRVARQRPHQPDSLGHLVHRPGGSWAFQYDSAAKLPDEAGYHFADERFVQGEYVSLR 137

Query: 121 EADGMHPYRVVAVTPL 136
           E   MH +RVVAV+ L
Sbjct: 138 EEGDMHTFRVVAVSRL 153


>ref|YP_001993684.1| hypothetical protein Rpal_4718 [Rhodopseudomonas palustris TIE-1]
 gb|ACF03209.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 136

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/136 (56%), Positives = 91/136 (66%)

Query: 1   MNRAAFKPLQNTALPHSFRQVRLERAREHDHPEGASAIGYVIVAPLDTTSRIDVETWRAN 60
           M +     + NT+LP SFRQ+RLE ARE  HPEG + I YVI+APLD   RID E W+ +
Sbjct: 1   MTKVTPSAILNTSLPASFRQIRLELAREPGHPEGEANIAYVIIAPLDGNDRIDAEIWKKH 60

Query: 61  RDACRVIRQRPGEDDQLGHLVHGPADSWRFHYDVAGATADEAGFHFGSEPFRVGEYVSVH 120
           R+ACRV RQRP + D LGHLVH P  SW F YD A    DEAG+HF  E F  GEYVS+ 
Sbjct: 61  REACRVARQRPHQPDSLGHLVHRPGGSWAFQYDSAAKLPDEAGYHFADERFVQGEYVSLR 120

Query: 121 EADGMHPYRVVAVTPL 136
           E   MH +RVVAV+ L
Sbjct: 121 EEGDMHTFRVVAVSRL 136


>ref|YP_484993.1| hypothetical protein RPB_1372 [Rhodopseudomonas palustris HaA2]
 gb|ABD06082.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 136

 Score =  157 bits (396), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 90/136 (66%)

Query: 1   MNRAAFKPLQNTALPHSFRQVRLERAREHDHPEGASAIGYVIVAPLDTTSRIDVETWRAN 60
           M +     + NT+LP  FRQ+RLE ARE  HP+G S I YVI+APLD    ID ETW+ +
Sbjct: 1   MTKGTPSAILNTSLPARFRQIRLELAREPGHPDGESQIAYVIIAPLDENDHIDAETWKKH 60

Query: 61  RDACRVIRQRPGEDDQLGHLVHGPADSWRFHYDVAGATADEAGFHFGSEPFRVGEYVSVH 120
           R+ACRV RQRP + D LGHL+H P  SW F YD      DEAG+HFG E F  GEYVS+ 
Sbjct: 61  REACRVARQRPQQPDSLGHLIHRPGGSWAFQYDATANIPDEAGYHFGDEKFVQGEYVSIR 120

Query: 121 EADGMHPYRVVAVTPL 136
           E   MH +RVV+V+ L
Sbjct: 121 EEGDMHTFRVVSVSRL 136