BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0171.0015.p         (125 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771136.1| hypothetical protein bll4496 [Bradyrhizobium ja...   194   4e-48
ref|ZP_08628134.1| putative metal chaperone [Bradyrhizobiaceae b...   183   7e-45
ref|NP_948150.1| hypothetical protein RPA2807 [Rhodopseudomonas ...   179   1e-43
ref|YP_001992126.1| hypothetical protein Rpal_3147 [Rhodopseudom...   179   1e-43
ref|YP_004109016.1| hypothetical protein Rpdx1_2697 [Rhodopseudo...   177   4e-43

>ref|NP_771136.1| hypothetical protein bll4496 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49761.1| bll4496 [Bradyrhizobium japonicum USDA 110]
          Length = 126

 Score =  194 bits (493), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/113 (83%), Positives = 99/113 (87%)

Query: 13  VSSIPRDQDGPVFRAPWEAQAFAMALSLHDRGVFTWTEWAAALADQIKRAQAAGDPDTGE 72
           + SIPRD DGPVFRAPWEA AFAMALSLH+RGVFTW EWAAALA +IKRAQAAGDPDTGE
Sbjct: 14  IPSIPRDDDGPVFRAPWEAHAFAMALSLHERGVFTWPEWAAALASEIKRAQAAGDPDTGE 73

Query: 73  TYYQHWLATLEHLVAAKGVTTHETLHRYRDAWDRAADRTPHGKPIELTAADFR 125
           TYY HWLATLE LVA KGV + ETLHRYRDAWD AADRTPHG+PIEL   DFR
Sbjct: 74  TYYLHWLATLEGLVARKGVASTETLHRYRDAWDHAADRTPHGRPIELKPEDFR 126


>ref|ZP_08628134.1| putative metal chaperone [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09043.1| putative metal chaperone [Bradyrhizobiaceae bacterium SG-6C]
          Length = 127

 Score =  183 bits (465), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 90/124 (72%), Positives = 102/124 (82%)

Query: 1   MDAGAAARATSAVSSIPRDQDGPVFRAPWEAQAFAMALSLHDRGVFTWTEWAAALADQIK 60
           +D  AA +AT+ +  IPRD +GPVFR PWEA+AFAMAL+LH RG+FTW EWA ALA++IK
Sbjct: 3   IDRQAALQATANLPGIPRDGEGPVFREPWEARAFAMALALHARGLFTWPEWADALANEIK 62

Query: 61  RAQAAGDPDTGETYYQHWLATLEHLVAAKGVTTHETLHRYRDAWDRAADRTPHGKPIELT 120
           RAQAAGD DTGETYY+HWLA LEHLVAAK V     LHRYRDAWDRAADRTPHG+PIEL 
Sbjct: 63  RAQAAGDADTGETYYRHWLAALEHLVAAKKVAPEGELHRYRDAWDRAADRTPHGQPIELA 122

Query: 121 AADF 124
             DF
Sbjct: 123 PEDF 126


>ref|NP_948150.1| hypothetical protein RPA2807 [Rhodopseudomonas palustris CGA009]
 emb|CAE28249.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 140

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 85/120 (70%), Positives = 98/120 (81%)

Query: 5   AAARATSAVSSIPRDQDGPVFRAPWEAQAFAMALSLHDRGVFTWTEWAAALADQIKRAQA 64
           AAA A  +V  +PRD DGPVFR PWEA AFAMA++LH RG+FTW EWAAAL+ +I+RAQA
Sbjct: 7   AAAIAAHSVPGLPRDDDGPVFREPWEAHAFAMAVTLHGRGLFTWPEWAAALSAEIRRAQA 66

Query: 65  AGDPDTGETYYQHWLATLEHLVAAKGVTTHETLHRYRDAWDRAADRTPHGKPIELTAADF 124
            GDPD G+TYY+HWLATLE +VA KGV +  T HRYRDAWDRAADRTPHG+PIEL   DF
Sbjct: 67  DGDPDCGDTYYRHWLATLEQMVATKGVASLATQHRYRDAWDRAADRTPHGRPIELQPGDF 126


>ref|YP_001992126.1| hypothetical protein Rpal_3147 [Rhodopseudomonas palustris TIE-1]
 gb|ACF01651.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 140

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/120 (70%), Positives = 98/120 (81%)

Query: 5   AAARATSAVSSIPRDQDGPVFRAPWEAQAFAMALSLHDRGVFTWTEWAAALADQIKRAQA 64
           AAA A  +V  +PRD DGPVFR PWEA AFAMA++LH RG+FTW EWAAAL+ +I+RAQA
Sbjct: 7   AAAIAAHSVPGLPRDDDGPVFREPWEAHAFAMAVTLHGRGLFTWPEWAAALSAEIRRAQA 66

Query: 65  AGDPDTGETYYQHWLATLEHLVAAKGVTTHETLHRYRDAWDRAADRTPHGKPIELTAADF 124
            GDPD G+TYY+H LATLE +VA KG+ + ET HRYRDAWDRAADRTPHG+PIEL   DF
Sbjct: 67  GGDPDCGDTYYRHCLATLEQMVATKGIASLETQHRYRDAWDRAADRTPHGRPIELQPGDF 126


>ref|YP_004109016.1| hypothetical protein Rpdx1_2697 [Rhodopseudomonas palustris DX-1]
 gb|ADU44283.1| hypothetical protein Rpdx1_2697 [Rhodopseudomonas palustris DX-1]
          Length = 129

 Score =  177 bits (450), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/123 (67%), Positives = 99/123 (80%)

Query: 2   DAGAAARATSAVSSIPRDQDGPVFRAPWEAQAFAMALSLHDRGVFTWTEWAAALADQIKR 61
           ++ A A A  +V  +P D DGPVFR PWEAQAFA+A++LH RG+FTW EWAA LAD+I+ 
Sbjct: 4   ESDATAIAARSVPGLPHDDDGPVFREPWEAQAFALAVTLHGRGLFTWQEWAATLADEIRC 63

Query: 62  AQAAGDPDTGETYYQHWLATLEHLVAAKGVTTHETLHRYRDAWDRAADRTPHGKPIELTA 121
           AQAAGDPD G+TYY+HWLATLE L+A KG+ + ET HRYRDAWDRAADRTPHG+PI L  
Sbjct: 64  AQAAGDPDCGDTYYRHWLATLERLIATKGIASRETQHRYRDAWDRAADRTPHGRPIALEP 123

Query: 122 ADF 124
            DF
Sbjct: 124 TDF 126