BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0171.0011.p (212 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771132.1| GTP-binding protein HFLX [Bradyrhizobium japoni... 344 5e-93 ref|YP_577116.1| GTP-binding protein, HSR1-related [Nitrobacter ... 342 3e-92 ref|YP_532452.1| HSR1-like GTP-binding protein [Rhodopseudomonas... 341 4e-92 ref|YP_001205843.1| putative GTP-binding protein (hflX) [Bradyrh... 340 1e-91 ref|ZP_08629877.1| GTP-binding protein HflX [Bradyrhizobiaceae b... 338 3e-91 >ref|NP_771132.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 110] dbj|BAC49757.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 110] Length = 437 Score = 344 bits (882), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 171/209 (81%), Positives = 189/209 (90%), Gaps = 2/209 (0%) Query: 1 VQAADMLFATLDPTLRALNLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADIIL 60 VQAADMLFATLDPTLRAL LPHGGKAMLSDTVGFISNLPTQL+AAFRATLEEVLEAD+IL Sbjct: 227 VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLIAAFRATLEEVLEADVIL 286 Query: 61 HVRDISHEDAEAQERDVEAVLRQLGIDPDADGGQRIIEVWNKIDRFDPVERDNLRNIAAR 120 HVRDISHEDAEAQ+ DV+AVLRQLGI+PD G RIIEVWNKIDR+D +R+ L NIAAR Sbjct: 287 HVRDISHEDAEAQQSDVDAVLRQLGINPDDSG--RIIEVWNKIDRYDAEQREELLNIAAR 344 Query: 121 RPPERPCFLVSAATGEGIDALLAAIEDRLAARRSTLNLSIDASDGAGISWLHRNAEVLNK 180 RP + P LVSA +GEG+DALLAAIE+RLAA+R+TL+LSIDA DGAGISWLHRN+EVL K Sbjct: 345 RPEDHPAMLVSAVSGEGVDALLAAIEERLAAKRTTLDLSIDAGDGAGISWLHRNSEVLTK 404 Query: 181 ELHGERFDMTVRVDETKRDIVMSRFAAVP 209 ELH RFDMTVRVDETKRDIV++RF AVP Sbjct: 405 ELHDGRFDMTVRVDETKRDIVVNRFDAVP 433 >ref|YP_577116.1| GTP-binding protein, HSR1-related [Nitrobacter hamburgensis X14] gb|ABE62656.1| GTP-binding protein HflX [Nitrobacter hamburgensis X14] Length = 444 Score = 342 bits (876), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 170/210 (80%), Positives = 188/210 (89%), Gaps = 2/210 (0%) Query: 1 VQAADMLFATLDPTLRALNLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADIIL 60 VQAADMLFATLDPTLRAL LPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEV+EAD+IL Sbjct: 235 VQAADMLFATLDPTLRALALPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVMEADVIL 294 Query: 61 HVRDISHEDAEAQERDVEAVLRQLGIDPDADGGQRIIEVWNKIDRFDPVERDNLRNIAAR 120 HVRDISHEDAEAQ+ DVEAVLRQLGIDP G RI+EVWNKIDRFD +R+NL NIA R Sbjct: 295 HVRDISHEDAEAQQHDVEAVLRQLGIDPGH--GARILEVWNKIDRFDADQRENLENIAVR 352 Query: 121 RPPERPCFLVSAATGEGIDALLAAIEDRLAARRSTLNLSIDASDGAGISWLHRNAEVLNK 180 R E PCFLVSA TGEG+D LLAAIEDRLAA R+TL+LS+DASDGA ISWLHRN+EVL K Sbjct: 353 RSAEVPCFLVSAETGEGLDTLLAAIEDRLAATRTTLDLSVDASDGAAISWLHRNSEVLVK 412 Query: 181 ELHGERFDMTVRVDETKRDIVMSRFAAVPH 210 EL R++MTVRVDETKRDI+++R+AA+PH Sbjct: 413 ELRDGRYEMTVRVDETKRDILVNRYAAIPH 442 >ref|YP_532452.1| HSR1-like GTP-binding protein [Rhodopseudomonas palustris BisB18] gb|ABD88133.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris BisB18] Length = 461 Score = 341 bits (874), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 175/210 (83%), Positives = 184/210 (87%) Query: 1 VQAADMLFATLDPTLRALNLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADIIL 60 VQAADMLFATLDPTLRAL LPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD+IL Sbjct: 250 VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADLIL 309 Query: 61 HVRDISHEDAEAQERDVEAVLRQLGIDPDADGGQRIIEVWNKIDRFDPVERDNLRNIAAR 120 HVRDI+HEDA+AQ+ DV AVLRQLGIDP+A GG RIIEVWNKIDRF E NLRNIAAR Sbjct: 310 HVRDIAHEDADAQQDDVAAVLRQLGIDPEAGGGGRIIEVWNKIDRFAADELANLRNIAAR 369 Query: 121 RPPERPCFLVSAATGEGIDALLAAIEDRLAARRSTLNLSIDASDGAGISWLHRNAEVLNK 180 R PE PC LVSA TGEGIDALL AIEDRLAA R TL+LSIDA+DGAG+SWLHRNAEVL K Sbjct: 370 RDPEHPCLLVSAVTGEGIDALLLAIEDRLAAARITLDLSIDAADGAGVSWLHRNAEVLEK 429 Query: 181 ELHGERFDMTVRVDETKRDIVMSRFAAVPH 210 EL RF MTVRVD TKRD V+SRF AV H Sbjct: 430 ELEDGRFVMTVRVDPTKRDTVISRFGAVQH 459 >ref|YP_001205843.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278] emb|CAL77618.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278] Length = 459 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 169/212 (79%), Positives = 187/212 (88%), Gaps = 2/212 (0%) Query: 1 VQAADMLFATLDPTLRALNLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADIIL 60 VQAADMLFATLDPTLRA++LPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD+IL Sbjct: 250 VQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADVIL 309 Query: 61 HVRDISHEDAEAQERDVEAVLRQLGIDPDADGGQRIIEVWNKIDRFDPVERDNLRNIAAR 120 HVRD+SHEDAEAQ+ DVE VL QLGIDP+A IIEVWNKIDR D R+NL NIAAR Sbjct: 310 HVRDMSHEDAEAQQHDVELVLSQLGIDPEAT--DTIIEVWNKIDRLDDAARENLANIAAR 367 Query: 121 RPPERPCFLVSAATGEGIDALLAAIEDRLAARRSTLNLSIDASDGAGISWLHRNAEVLNK 180 RPPERPCF+VSA TGEG+DALL AIEDRLAA R+TL+L+IDA+DGAGISWLHRNAEVL+K Sbjct: 368 RPPERPCFMVSAETGEGVDALLQAIEDRLAAARTTLDLTIDAADGAGISWLHRNAEVLSK 427 Query: 181 ELHGERFDMTVRVDETKRDIVMSRFAAVPHEA 212 ELH +DMTVRVD TKRDIV+ R+ +P A Sbjct: 428 ELHEGHYDMTVRVDATKRDIVVERYHGIPRVA 459 >ref|ZP_08629877.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07246.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C] Length = 436 Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 171/209 (81%), Positives = 184/209 (88%), Gaps = 2/209 (0%) Query: 1 VQAADMLFATLDPTLRALNLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADIIL 60 VQAADMLFATLDPTLRAL LPHGGKAMLSDTVGFIS+LPT LVAAFRATLEEV+EAD+IL Sbjct: 227 VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISDLPTMLVAAFRATLEEVIEADVIL 286 Query: 61 HVRDISHEDAEAQERDVEAVLRQLGIDPDADGGQRIIEVWNKIDRFDPVERDNLRNIAAR 120 HVRDISHEDAEAQ+ DVE VLRQLGID DGGQRI+EVWNKIDRFD R NL NIAAR Sbjct: 287 HVRDISHEDAEAQQHDVEGVLRQLGID--TDGGQRILEVWNKIDRFDEEGRANLMNIAAR 344 Query: 121 RPPERPCFLVSAATGEGIDALLAAIEDRLAARRSTLNLSIDASDGAGISWLHRNAEVLNK 180 RPPERPCF VSA TGEG+DALLAAIEDRLAA R TL+L+ID SDGAGISWLHRNAEVL+K Sbjct: 345 RPPERPCFPVSAETGEGLDALLAAIEDRLAATRVTLDLTIDPSDGAGISWLHRNAEVLDK 404 Query: 181 ELHGERFDMTVRVDETKRDIVMSRFAAVP 209 L RF MTVRVD +KRDI +++F AVP Sbjct: 405 HLENGRFAMTVRVDISKRDITIAKFGAVP 433